RNA–Protein interactions for RNA: ENST00000624009.3

LINC00963-217, long intergenic non-protein coding RNA 963, humanhuman

TSL 5 BASIC

Gene LINC00963, Length 663 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00963-217ENST00000624009 DGKGP49619 791 aa12.98□□□□□ -0.33
LINC00963-217ENST00000624009 KCNMA1Q12791 1236 aa12.98□□□□□ -0.33
LINC00963-217ENST00000624009 MTA1Q13330 715 aa12.98□□□□□ -0.33
LINC00963-217ENST00000624009 PDCLQ13371 301 aa12.98□□□□□ -0.33
LINC00963-217ENST00000624009 ARHGAP44Q17R89 818 aa12.98□□□□□ -0.33
LINC00963-217ENST00000624009 RNF43Q68DV7 783 aa12.98□□□□□ -0.33
LINC00963-217ENST00000624009 DENND1BQ6P3S1 775 aa12.98□□□□□ -0.33
LINC00963-217ENST00000624009 ZDHHC17Q8IUH5 632 aa12.98□□□□□ -0.33
LINC00963-217ENST00000624009 DENND1CQ8IV53 801 aa12.98□□□□□ -0.33
LINC00963-217ENST00000624009 TSTD1Q8NFU3 115 aa12.98□□□□□ -0.33
LINC00963-217ENST00000624009 ZC3H10Q96K80 434 aaKnown RBP12.98□□□□□ -0.33
LINC00963-217ENST00000624009 STK33Q9BYT3 514 aa12.98□□□□□ -0.33
LINC00963-217ENST00000624009 NAT10Q9H0A0 1025 aaKnown RBP12.98□□□□□ -0.33
LINC00963-217ENST00000624009 ST7Q9NRC1 585 aa12.98□□□□□ -0.33
LINC00963-217ENST00000624009 GMEB2Q9UKD1 530 aa12.98□□□□□ -0.33
LINC00963-217ENST00000624009 TLR6Q9Y2C9 796 aa12.98□□□□□ -0.33
LINC00963-217ENST00000624009 CEP83Q9Y592 693 aa12.98□□□□□ -0.33
LINC00963-217ENST00000624009 DNAH14Q0VDD8 3507 aa12.97□□□□□ -0.33
LINC00963-217ENST00000624009 AXIN1O15169 862 aa12.97□□□□□ -0.33
LINC00963-217ENST00000624009 PAPSS1O43252 624 aaPredicted RBP12.97□□□□□ -0.33
LINC00963-217ENST00000624009 RPP40O75818 363 aaKnown RBP12.97□□□□□ -0.33
LINC00963-217ENST00000624009 FYNP06241 537 aa12.97□□□□□ -0.33
LINC00963-217ENST00000624009 HNRNPLP14866 589 aaKnown RBP eCLIP12.97□□□□□ -0.33
LINC00963-217ENST00000624009 ZNF18P17022 549 aa12.97□□□□□ -0.33
LINC00963-217ENST00000624009 CDH5P33151 784 aaPredicted RBP12.97□□□□□ -0.33
LINC00963-217ENST00000624009 KRT9P35527 623 aa12.97□□□□□ -0.33
LINC00963-217ENST00000624009 SCNN1AP37088 669 aa12.97□□□□□ -0.33
LINC00963-217ENST00000624009 USP8P40818 1118 aa12.97□□□□□ -0.33
LINC00963-217ENST00000624009 YWHAZP63104 245 aaKnown RBP12.97□□□□□ -0.33
LINC00963-217ENST00000624009 MESP2Q0VG99 397 aa12.97□□□□□ -0.33
LINC00963-217ENST00000624009 SIM2Q14190 667 aaPredicted RBP12.97□□□□□ -0.33
LINC00963-217ENST00000624009 EIF4HQ15056 248 aaKnown RBP12.97□□□□□ -0.33
LINC00963-217ENST00000624009 KRT31Q15323 416 aa12.97□□□□□ -0.33
LINC00963-217ENST00000624009 MPPE1Q53F39 396 aa12.97□□□□□ -0.33
LINC00963-217ENST00000624009 C2orf27AQ580R0 203 aa12.97□□□□□ -0.33
LINC00963-217ENST00000624009 FKBP15Q5T1M5 1219 aa12.97□□□□□ -0.33
LINC00963-217ENST00000624009 TPGS1Q6ZTW0 290 aa12.97□□□□□ -0.33
LINC00963-217ENST00000624009 CACNA2D4Q7Z3S7 1137 aa12.97□□□□□ -0.33
LINC00963-217ENST00000624009 SCUBE3Q8IX30 993 aa12.97□□□□□ -0.33
LINC00963-217ENST00000624009 ZNF513Q8N8E2 541 aaPredicted RBP12.97□□□□□ -0.33
LINC00963-217ENST00000624009 C1orf131Q8NDD1 294 aaKnown RBP12.97□□□□□ -0.33
LINC00963-217ENST00000624009 NDRG1Q92597 394 aaKnown RBP12.97□□□□□ -0.33
LINC00963-217ENST00000624009 EDEM1Q92611 657 aa12.97□□□□□ -0.33
LINC00963-217ENST00000624009 DDX50Q9BQ39 737 aaKnown RBP12.97□□□□□ -0.33
LINC00963-217ENST00000624009 BPIFA3Q9BQP9 254 aa12.97□□□□□ -0.33
LINC00963-217ENST00000624009 MIS12Q9H081 205 aa12.97□□□□□ -0.33
LINC00963-217ENST00000624009 POPDC2Q9HBU9 364 aa12.97□□□□□ -0.33
LINC00963-217ENST00000624009 POLMQ9NP87 494 aaPredicted RBP12.97□□□□□ -0.33
LINC00963-217ENST00000624009 FANCLQ9NW38 375 aa12.97□□□□□ -0.33
LINC00963-217ENST00000624009 LIMA1Q9UHB6 759 aaKnown RBP12.97□□□□□ -0.33
LINC00963-217ENST00000624009 CYTH4Q9UIA0 394 aa12.97□□□□□ -0.33
LINC00963-217ENST00000624009 DOCK4Q8N1I0 1966 aa12.96□□□□□ -0.33
LINC00963-217ENST00000624009 E5RJQ4 531 aa12.96□□□□□ -0.33
LINC00963-217ENST00000624009 PES1O00541 588 aaKnown RBP12.96□□□□□ -0.33
LINC00963-217ENST00000624009 TIMM44O43615 452 aa12.96□□□□□ -0.33
LINC00963-217ENST00000624009 HSF2BPO75031 334 aa12.96□□□□□ -0.33
LINC00963-217ENST00000624009 KLF8O95600 359 aaPredicted RBP12.96□□□□□ -0.33
LINC00963-217ENST00000624009 LSM8O95777 96 aaKnown RBP12.96□□□□□ -0.33
LINC00963-217ENST00000624009 IGLV3-25P01717 112 aa12.96□□□□□ -0.33
LINC00963-217ENST00000624009 NCAM1P13591 858 aa12.96□□□□□ -0.33
LINC00963-217ENST00000624009 PTMSP20962 102 aa12.96□□□□□ -0.33
LINC00963-217ENST00000624009 NTSR1P30989 418 aa12.96□□□□□ -0.33
LINC00963-217ENST00000624009 SLC11A2P49281 568 aa12.96□□□□□ -0.33
LINC00963-217ENST00000624009 SEC13P55735 322 aa12.96□□□□□ -0.33
LINC00963-217ENST00000624009 APBA1Q02410 837 aa12.96□□□□□ -0.33
LINC00963-217ENST00000624009 KDSRQ06136 332 aa12.96□□□□□ -0.33
LINC00963-217ENST00000624009 DMWDQ09019 674 aa12.96□□□□□ -0.33
LINC00963-217ENST00000624009 EIF4EBP2Q13542 120 aaPredicted RBP12.96□□□□□ -0.33
LINC00963-217ENST00000624009 DRAP1Q14919 205 aaPredicted RBP12.96□□□□□ -0.33
LINC00963-217ENST00000624009 EFHC1Q5JVL4 640 aa12.96□□□□□ -0.33
LINC00963-217ENST00000624009 C10orf76Q5T2E6 689 aa12.96□□□□□ -0.33
LINC00963-217ENST00000624009 C11orf57Q6ZUT1 292 aaPredicted RBP12.96□□□□□ -0.33
LINC00963-217ENST00000624009 ZNF677Q86XU0 584 aa12.96□□□□□ -0.33
LINC00963-217ENST00000624009 WDTC1Q8N5D0 677 aa12.96□□□□□ -0.33
LINC00963-217ENST00000624009 ALLCQ8N6M5 410 aa12.96□□□□□ -0.33
LINC00963-217ENST00000624009 NAT16Q8N8M0 369 aa12.96□□□□□ -0.33
LINC00963-217ENST00000624009 TXNDC5Q8NBS9 432 aaKnown RBP12.96□□□□□ -0.33
LINC00963-217ENST00000624009 ZNF397Q8NF99 534 aaPredicted RBP12.96□□□□□ -0.33
LINC00963-217ENST00000624009 DQX1Q8TE96 717 aaKnown RBP12.96□□□□□ -0.33
LINC00963-217ENST00000624009 CLEC4CQ8WTT0 213 aa12.96□□□□□ -0.33
LINC00963-217ENST00000624009 UCMAQ8WVF2 138 aa12.96□□□□□ -0.33
LINC00963-217ENST00000624009 FAM149B1Q96BN6 582 aa12.96□□□□□ -0.33
LINC00963-217ENST00000624009 SLC39A13Q96H72 371 aa12.96□□□□□ -0.33
LINC00963-217ENST00000624009 PIWIL1Q96J94 861 aaKnown RBP12.96□□□□□ -0.33
LINC00963-217ENST00000624009 PPP1R13BQ96KQ4 1090 aa12.96□□□□□ -0.33
LINC00963-217ENST00000624009 GABRG3Q99928 467 aa12.96□□□□□ -0.33
LINC00963-217ENST00000624009 NCDNQ9UBB6 729 aa12.96□□□□□ -0.33
LINC00963-217ENST00000624009 SFMBT1Q9UHJ3 866 aa12.96□□□□□ -0.33
LINC00963-217ENST00000624009 FHOD1Q9Y613 1164 aa12.96□□□□□ -0.33
LINC00963-217ENST00000624009 TPRP12270 2363 aaKnown RBP12.96□□□□□ -0.33
LINC00963-217ENST00000624009 NCOR2Q9Y618 2525 aa12.95□□□□□ -0.34
LINC00963-217ENST00000624009 CABIN1Q9Y6J0 2220 aa12.95□□□□□ -0.34
LINC00963-217ENST00000624009 LGALS16A8MUM7 142 aa12.95□□□□□ -0.34
LINC00963-217ENST00000624009 F8VZ95 297 aa12.95□□□□□ -0.34
LINC00963-217ENST00000624009 SGK1O00141 431 aa12.95□□□□□ -0.34
LINC00963-217ENST00000624009 ADAM23O75077 832 aa12.95□□□□□ -0.34
LINC00963-217ENST00000624009 CALCAP01258 141 aa12.95□□□□□ -0.34
LINC00963-217ENST00000624009 HMBSP08397 361 aa12.95□□□□□ -0.34
LINC00963-217ENST00000624009 SLC2A3P11169 496 aa12.95□□□□□ -0.34
LINC00963-217ENST00000624009 CYP11B1P15538 503 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms