RNA–Protein interactions for RNA: ENST00000623253.4

CD99-211, Transcript of CD99 molecule (Xg blood group), humanhuman

TSL 1 (best)

Gene CD99, Length 573 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD99-211ENST00000623253 CADM4Q8NFZ8 388 aa17■□□□□ 0.31
CD99-211ENST00000623253 DNASE2BQ8WZ79 361 aa17■□□□□ 0.31
CD99-211ENST00000623253 PAGE5Q96GU1 130 aa17■□□□□ 0.31
CD99-211ENST00000623253 DCLK3Q9C098 648 aa17■□□□□ 0.31
CD99-211ENST00000623253 CIPCQ9C0C6 399 aa17■□□□□ 0.31
CD99-211ENST00000623253 KCTD10Q9H3F6 313 aa17■□□□□ 0.31
CD99-211ENST00000623253 GAREM1Q9H706 876 aa17■□□□□ 0.31
CD99-211ENST00000623253 CYP3A43Q9HB55 503 aa17■□□□□ 0.31
CD99-211ENST00000623253 PNPLA8Q9NP80 782 aa17■□□□□ 0.31
CD99-211ENST00000623253 USP36Q9P275 1121 aaKnown RBP17■□□□□ 0.31
CD99-211ENST00000623253 ZFYVE26Q68DK2 2539 aa16.99■□□□□ 0.31
CD99-211ENST00000623253 NPC1O15118 1278 aa16.99■□□□□ 0.31
CD99-211ENST00000623253 BCAT2O15382 392 aaPredicted RBP16.99■□□□□ 0.31
CD99-211ENST00000623253 CALUO43852 315 aaPredicted RBP16.99■□□□□ 0.31
CD99-211ENST00000623253 SLFN14P0C7P3 912 aa16.99■□□□□ 0.31
CD99-211ENST00000623253 TRIM49P0CI25 452 aa16.99■□□□□ 0.31
CD99-211ENST00000623253 TRIM49CP0CI26 452 aa16.99■□□□□ 0.31
CD99-211ENST00000623253 OXTRP30559 389 aa16.99■□□□□ 0.31
CD99-211ENST00000623253 GCLMP48507 274 aa16.99■□□□□ 0.31
CD99-211ENST00000623253 VAMP7P51809 220 aa16.99■□□□□ 0.31
CD99-211ENST00000623253 ZNF132P52740 706 aa16.99■□□□□ 0.31
CD99-211ENST00000623253 C1orf220Q5T0J3 134 aa16.99■□□□□ 0.31
CD99-211ENST00000623253 RSRC2Q7L4I2 434 aaKnown RBP16.99■□□□□ 0.31
CD99-211ENST00000623253 ANKS1BQ7Z6G8 1248 aa16.99■□□□□ 0.31
CD99-211ENST00000623253 SLCO6A1Q86UG4 719 aa16.99■□□□□ 0.31
CD99-211ENST00000623253 CCDC150Q8NCX0 1101 aa16.99■□□□□ 0.31
CD99-211ENST00000623253 TAS1R2Q8TE23 839 aa16.99■□□□□ 0.31
CD99-211ENST00000623253 DDI1Q8WTU0 396 aa16.99■□□□□ 0.31
CD99-211ENST00000623253 SORCS1Q8WY21 1168 aa16.99■□□□□ 0.31
CD99-211ENST00000623253 HEXIM2Q96MH2 286 aaKnown RBP16.99■□□□□ 0.31
CD99-211ENST00000623253 CDK5RAP1Q96SZ6 601 aaKnown RBP16.99■□□□□ 0.31
CD99-211ENST00000623253 DUSP16Q9BY84 665 aa16.99■□□□□ 0.31
CD99-211ENST00000623253 CCDC86Q9H6F5 360 aaKnown RBP16.99■□□□□ 0.31
CD99-211ENST00000623253 APOBEC3GQ9HC16 384 aaKnown RBP16.99■□□□□ 0.31
CD99-211ENST00000623253 ELOVL2Q9NXB9 296 aa16.99■□□□□ 0.31
CD99-211ENST00000623253 CLIC5Q9NZA1 410 aa16.99■□□□□ 0.31
CD99-211ENST00000623253 EIF2B4Q9UI10 523 aaKnown RBP16.99■□□□□ 0.31
CD99-211ENST00000623253 PCOLCE2Q9UKZ9 415 aa16.99■□□□□ 0.31
CD99-211ENST00000623253 AGO1Q9UL18 857 aaKnown RBP16.99■□□□□ 0.31
CD99-211ENST00000623253 PKD1L2Q7Z442 2459 aa16.98■□□□□ 0.31
CD99-211ENST00000623253 BAHCC1Q9P281 2608 aa16.98■□□□□ 0.31
CD99-211ENST00000623253 GOLGA8CPA6NN73 597 aa16.98■□□□□ 0.31
CD99-211ENST00000623253 METTL12A8MUP2 240 aa16.98■□□□□ 0.31
CD99-211ENST00000623253 CER1O95813 267 aa16.98■□□□□ 0.31
CD99-211ENST00000623253 CAPNS1P04632 268 aa16.98■□□□□ 0.31
CD99-211ENST00000623253 EPHX1P07099 455 aa16.98■□□□□ 0.31
CD99-211ENST00000623253 MATKP42679 507 aa16.98■□□□□ 0.31
CD99-211ENST00000623253 ZNF234Q14588 700 aa16.98■□□□□ 0.31
CD99-211ENST00000623253 HLA-BQ31612 363 aa16.98■□□□□ 0.31
CD99-211ENST00000623253 PPP1R26Q5T8A7 1209 aaPredicted RBP16.98■□□□□ 0.31
CD99-211ENST00000623253 SERPINA13PQ6UXR4 307 aa16.98■□□□□ 0.31
CD99-211ENST00000623253 CCNI2Q6ZMN8 369 aaPredicted RBP16.98■□□□□ 0.31
CD99-211ENST00000623253 TMEM174Q8WUU8 243 aa16.98■□□□□ 0.31
CD99-211ENST00000623253 SNX19Q92543 992 aa16.98■□□□□ 0.31
CD99-211ENST00000623253 NUP58Q9BVL2 599 aa16.98■□□□□ 0.31
CD99-211ENST00000623253 NIF3L1Q9GZT8 377 aa16.98■□□□□ 0.31
CD99-211ENST00000623253 TM7SF3Q9NS93 570 aa16.98■□□□□ 0.31
CD99-211ENST00000623253 MARCH2Q9P0N8 246 aa16.98■□□□□ 0.31
CD99-211ENST00000623253 CFAP45Q9UL16 551 aa16.98■□□□□ 0.31
CD99-211ENST00000623253 STRIP2Q9ULQ0 834 aa16.98■□□□□ 0.31
CD99-211ENST00000623253 CLEC4EQ9ULY5 219 aa16.98■□□□□ 0.31
CD99-211ENST00000623253 MYH10P35580 1976 aa16.97■□□□□ 0.31
CD99-211ENST00000623253 SLC12A8A0AV02 714 aa16.97■□□□□ 0.31
CD99-211ENST00000623253 ACTN4O43707 911 aaKnown RBP16.97■□□□□ 0.31
CD99-211ENST00000623253 CBFA2T3O75081 653 aa16.97■□□□□ 0.31
CD99-211ENST00000623253 CILPO75339 1184 aa16.97■□□□□ 0.31
CD99-211ENST00000623253 KRT13P13646 458 aa16.97■□□□□ 0.31
CD99-211ENST00000623253 PRKCHP24723 683 aa16.97■□□□□ 0.31
CD99-211ENST00000623253 ENPP2Q13822 863 aa16.97■□□□□ 0.31
CD99-211ENST00000623253 E2F5Q15329 346 aa16.97■□□□□ 0.31
CD99-211ENST00000623253 IL27RAQ6UWB1 636 aa16.97■□□□□ 0.31
CD99-211ENST00000623253 ZNF276Q8N554 614 aa16.97■□□□□ 0.31
CD99-211ENST00000623253 MDM1Q8TC05 714 aa16.97■□□□□ 0.31
CD99-211ENST00000623253 RHBDD1Q8TEB9 315 aa16.97■□□□□ 0.31
CD99-211ENST00000623253 PIWIL1Q96J94 861 aaKnown RBP16.97■□□□□ 0.31
CD99-211ENST00000623253 FNDC3AQ9Y2H6 1198 aaKnown RBP16.97■□□□□ 0.31
CD99-211ENST00000623253 NFE2L3Q9Y4A8 694 aa16.97■□□□□ 0.31
CD99-211ENST00000623253 GPSM3Q9Y4H4 160 aa16.97■□□□□ 0.31
CD99-211ENST00000623253 USP3Q9Y6I4 520 aa16.97■□□□□ 0.31
CD99-211ENST00000623253 A0A1B0GVT2 93 aa16.96■□□□□ 0.31
CD99-211ENST00000623253 HLA-EP13747 358 aa16.96■□□□□ 0.31
CD99-211ENST00000623253 NR2F2P24468 414 aa16.96■□□□□ 0.31
CD99-211ENST00000623253 COPAP53621 1224 aa16.96■□□□□ 0.31
CD99-211ENST00000623253 PPP3CAQ08209 521 aa16.96■□□□□ 0.31
CD99-211ENST00000623253 EIF4HQ15056 248 aaKnown RBP16.96■□□□□ 0.31
CD99-211ENST00000623253 GLRX5Q86SX6 157 aa16.96■□□□□ 0.31
CD99-211ENST00000623253 ARHGAP18Q8N392 663 aa16.96■□□□□ 0.31
CD99-211ENST00000623253 ARID3AQ99856 593 aa16.96■□□□□ 0.31
CD99-211ENST00000623253 MAPK8IP1Q9UQF2 711 aa16.96■□□□□ 0.31
CD99-211ENST00000623253 DMXL2Q8TDJ6 3036 aa16.96■□□□□ 0.3
CD99-211ENST00000623253 TIMM44O43615 452 aa16.95■□□□□ 0.3
CD99-211ENST00000623253 TSPAN3O60637 253 aa16.95■□□□□ 0.3
CD99-211ENST00000623253 CSNK1EP49674 416 aaKnown RBP16.95■□□□□ 0.3
CD99-211ENST00000623253 SLC8A3P57103 927 aa16.95■□□□□ 0.3
CD99-211ENST00000623253 YWHAGP61981 247 aaKnown RBP eCLIP16.95■□□□□ 0.3
CD99-211ENST00000623253 BNC1Q01954 994 aa16.95■□□□□ 0.3
CD99-211ENST00000623253 PKP1Q13835 747 aa16.95■□□□□ 0.3
CD99-211ENST00000623253 COL28A1Q2UY09 1125 aa16.95■□□□□ 0.3
CD99-211ENST00000623253 INTS8Q75QN2 995 aaKnown RBP16.95■□□□□ 0.3
CD99-211ENST00000623253 PDZD3Q86UT5 571 aa16.95■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms