RNA–Protein interactions for RNA: ENST00000622633.4

LITAF-221, Transcript of lipopolysaccharide induced TNF factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LITAF, Length 2,467 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-221ENST00000622633 CTRCQ99895 268 aa12.86□□□□□ -0.35
LITAF-221ENST00000622633 ACAD9Q9H845 621 aa12.86□□□□□ -0.35
LITAF-221ENST00000622633 FKBP14Q9NWM8 211 aa12.86□□□□□ -0.35
LITAF-221ENST00000622633 HACL1Q9UJ83 578 aa12.86□□□□□ -0.35
LITAF-221ENST00000622633 MOSPD1Q9UJG1 213 aa12.86□□□□□ -0.35
LITAF-221ENST00000622633 ANGPTL2Q9UKU9 493 aa12.86□□□□□ -0.35
LITAF-221ENST00000622633 PHTF1Q9UMS5 762 aa12.86□□□□□ -0.35
LITAF-221ENST00000622633 SOBPA7XYQ1 873 aa12.85□□□□□ -0.35
LITAF-221ENST00000622633 NDC80O14777 642 aa12.85□□□□□ -0.35
LITAF-221ENST00000622633 GSC2O15499 205 aa12.85□□□□□ -0.35
LITAF-221ENST00000622633 AP1G1O43747 822 aa12.85□□□□□ -0.35
LITAF-221ENST00000622633 GLULP15104 373 aa12.85□□□□□ -0.35
LITAF-221ENST00000622633 RPS3AP61247 264 aaKnown RBP12.85□□□□□ -0.35
LITAF-221ENST00000622633 NR1H3Q13133 447 aa12.85□□□□□ -0.35
LITAF-221ENST00000622633 MTM1Q13496 603 aa12.85□□□□□ -0.35
LITAF-221ENST00000622633 SPARCL1Q14515 664 aa12.85□□□□□ -0.35
LITAF-221ENST00000622633 SF3B4Q15427 424 aaKnown RBP eCLIP12.85□□□□□ -0.35
LITAF-221ENST00000622633 KCNJ8Q15842 424 aa12.85□□□□□ -0.35
LITAF-221ENST00000622633 TRIM71Q2Q1W2 868 aaKnown RBP12.85□□□□□ -0.35
LITAF-221ENST00000622633 LRRC38Q5VT99 294 aa12.85□□□□□ -0.35
LITAF-221ENST00000622633 FYB2Q5VWT5 728 aa12.85□□□□□ -0.35
LITAF-221ENST00000622633 PPP1R2P3Q6NXS1 205 aa12.85□□□□□ -0.35
LITAF-221ENST00000622633 DHRS4L2Q6PKH6 230 aa12.85□□□□□ -0.35
LITAF-221ENST00000622633 SCARA5Q6ZMJ2 495 aa12.85□□□□□ -0.35
LITAF-221ENST00000622633 TDRPQ86YL5 185 aa12.85□□□□□ -0.35
LITAF-221ENST00000622633 SCYL3Q8IZE3 742 aa12.85□□□□□ -0.35
LITAF-221ENST00000622633 TMEM35BQ8NCS4 154 aa12.85□□□□□ -0.35
LITAF-221ENST00000622633 EFHD2Q96C19 240 aaPredicted RBP12.85□□□□□ -0.35
LITAF-221ENST00000622633 TCF12Q99081 682 aa12.85□□□□□ -0.35
LITAF-221ENST00000622633 TEX13BQ9BXU2 312 aa12.85□□□□□ -0.35
LITAF-221ENST00000622633 SIAEQ9HAT2 523 aa12.85□□□□□ -0.35
LITAF-221ENST00000622633 CISHQ9NSE2 258 aa12.85□□□□□ -0.35
LITAF-221ENST00000622633 ZDHHC7Q9NXF8 308 aa12.85□□□□□ -0.35
LITAF-221ENST00000622633 ADAMTS5Q9UNA0 930 aa12.85□□□□□ -0.35
LITAF-221ENST00000622633 FER1L6Q2WGJ9 1857 aa12.85□□□□□ -0.35
LITAF-221ENST00000622633 ARID2Q68CP9 1835 aa12.85□□□□□ -0.35
LITAF-221ENST00000622633 PRPF4O43172 522 aaKnown RBP eCLIP12.85□□□□□ -0.35
LITAF-221ENST00000622633 PEX10O60683 326 aa12.85□□□□□ -0.35
LITAF-221ENST00000622633 ATG7O95352 703 aa12.85□□□□□ -0.35
LITAF-221ENST00000622633 ANPEPP15144 967 aa12.85□□□□□ -0.35
LITAF-221ENST00000622633 CA4P22748 312 aa12.85□□□□□ -0.35
LITAF-221ENST00000622633 OAZ1P54368 228 aa12.85□□□□□ -0.35
LITAF-221ENST00000622633 SMTNL2Q2TAL5 461 aa12.85□□□□□ -0.35
LITAF-221ENST00000622633 AGAP9Q5VTM2 703 aa12.85□□□□□ -0.35
LITAF-221ENST00000622633 CENPUQ71F23 418 aa12.85□□□□□ -0.35
LITAF-221ENST00000622633 SLC38A6Q8IZM9 456 aa12.85□□□□□ -0.35
LITAF-221ENST00000622633 CCDC110Q8TBZ0 833 aa12.85□□□□□ -0.35
LITAF-221ENST00000622633 JDP2Q8WYK2 163 aa12.85□□□□□ -0.35
LITAF-221ENST00000622633 NKD2Q969F2 451 aaPredicted RBP12.85□□□□□ -0.35
LITAF-221ENST00000622633 WRNIP1Q96S55 665 aa12.85□□□□□ -0.35
LITAF-221ENST00000622633 VPS33BQ9H267 617 aa12.85□□□□□ -0.35
LITAF-221ENST00000622633 UBN1Q9NPG3 1134 aa12.85□□□□□ -0.35
LITAF-221ENST00000622633 SLC38A7Q9NVC3 462 aa12.85□□□□□ -0.35
LITAF-221ENST00000622633 GID8Q9NWU2 228 aa12.85□□□□□ -0.35
LITAF-221ENST00000622633 STARD13Q9Y3M8 1113 aa12.85□□□□□ -0.35
LITAF-221ENST00000622633 RGPD3A6NKT7 1758 aaPredicted RBP12.84□□□□□ -0.35
LITAF-221ENST00000622633 RGPD4Q7Z3J3 1758 aa12.84□□□□□ -0.35
LITAF-221ENST00000622633 MAGEB2O15479 319 aa12.84□□□□□ -0.35
LITAF-221ENST00000622633 PARNO95453 639 aaKnown RBP12.84□□□□□ -0.35
LITAF-221ENST00000622633 ITGAVP06756 1048 aa12.84□□□□□ -0.35
LITAF-221ENST00000622633 DDX5P17844 614 aaKnown RBP12.84□□□□□ -0.35
LITAF-221ENST00000622633 CDH3P22223 829 aa12.84□□□□□ -0.35
LITAF-221ENST00000622633 S100A5P33763 92 aa12.84□□□□□ -0.35
LITAF-221ENST00000622633 ZNF280AP59817 542 aaPredicted RBP12.84□□□□□ -0.35
LITAF-221ENST00000622633 THOC5Q13769 683 aaKnown RBP12.84□□□□□ -0.35
LITAF-221ENST00000622633 PIGHQ14442 188 aaPredicted RBP12.84□□□□□ -0.35
LITAF-221ENST00000622633 EFTUD2Q15029 972 aaKnown RBP eCLIP12.84□□□□□ -0.354e-13■□□□□ 11.1
LITAF-221ENST00000622633 STXBP2Q15833 593 aa12.84□□□□□ -0.35
LITAF-221ENST00000622633 DCAF6Q58WW2 860 aa12.84□□□□□ -0.35
LITAF-221ENST00000622633 ANKRD22Q5VYY1 191 aa12.84□□□□□ -0.35
LITAF-221ENST00000622633 DENND1BQ6P3S1 775 aa12.84□□□□□ -0.35
LITAF-221ENST00000622633 UGT2A3Q6UWM9 527 aa12.84□□□□□ -0.35
LITAF-221ENST00000622633 BRSK2Q8IWQ3 736 aa12.84□□□□□ -0.35
LITAF-221ENST00000622633 ACTRT2Q8TDY3 377 aa12.84□□□□□ -0.35
LITAF-221ENST00000622633 PCYT2Q99447 389 aa12.84□□□□□ -0.35
LITAF-221ENST00000622633 NIFKQ9BYG3 293 aaKnown RBP12.84□□□□□ -0.35
LITAF-221ENST00000622633 TMEM134Q9H6X4 195 aa12.84□□□□□ -0.35
LITAF-221ENST00000622633 AS3MTQ9HBK9 375 aa12.84□□□□□ -0.35
LITAF-221ENST00000622633 TJP2Q9UDY2 1190 aa12.84□□□□□ -0.35
LITAF-221ENST00000622633 KLHL3Q9UH77 587 aa12.84□□□□□ -0.35
LITAF-221ENST00000622633 BUD23O43709 281 aaKnown RBP12.84□□□□□ -0.35
LITAF-221ENST00000622633 B4GALT4O60513 344 aa12.84□□□□□ -0.35
LITAF-221ENST00000622633 LSM8O95777 96 aaKnown RBP12.84□□□□□ -0.35
LITAF-221ENST00000622633 ENO2P09104 434 aaPredicted RBP12.84□□□□□ -0.35
LITAF-221ENST00000622633 AMPD1P23109 780 aa12.84□□□□□ -0.35
LITAF-221ENST00000622633 SSTR1P30872 391 aa12.84□□□□□ -0.35
LITAF-221ENST00000622633 RFC1P35251 1148 aaPredicted RBP12.84□□□□□ -0.35
LITAF-221ENST00000622633 CHN2P52757 468 aa12.84□□□□□ -0.35
LITAF-221ENST00000622633 GPX6P59796 221 aa12.84□□□□□ -0.35
LITAF-221ENST00000622633 BOLA3Q53S33 107 aa12.84□□□□□ -0.35
LITAF-221ENST00000622633 KCNT1Q5JUK3 1230 aa12.84□□□□□ -0.35
LITAF-221ENST00000622633 FNBP1LQ5T0N5 605 aa12.84□□□□□ -0.35
LITAF-221ENST00000622633 USP43Q70EL4 1123 aa12.84□□□□□ -0.35
LITAF-221ENST00000622633 LSMEM2Q8N112 164 aa12.84□□□□□ -0.35
LITAF-221ENST00000622633 SLC35B2Q8TB61 432 aa12.84□□□□□ -0.35
LITAF-221ENST00000622633 GIPC2Q8TF65 315 aa12.84□□□□□ -0.35
LITAF-221ENST00000622633 PCDH9Q9HC56 1237 aa12.84□□□□□ -0.35
LITAF-221ENST00000622633 ZNF304Q9HCX3 659 aa12.84□□□□□ -0.35
LITAF-221ENST00000622633 GIN1Q9NXP7 522 aa12.84□□□□□ -0.35
LITAF-221ENST00000622633 SMG5Q9UPR3 1016 aaKnown RBP12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms