RNA–Protein interactions for RNA: ENST00000621783.4

CPNE3-212, Transcript of copine 3, humanhuman

TSL 5

Gene CPNE3, Length 817 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-212ENST00000621783 HAX1O00165 279 aa11.06□□□□□ -0.64
CPNE3-212ENST00000621783 CCL16O15467 120 aa11.06□□□□□ -0.64
CPNE3-212ENST00000621783 CTIFO43310 598 aaKnown RBP11.06□□□□□ -0.64
CPNE3-212ENST00000621783 PHF2O75151 1096 aa11.06□□□□□ -0.64
CPNE3-212ENST00000621783 ZMYND10O75800 440 aa11.06□□□□□ -0.64
CPNE3-212ENST00000621783 TBX18O95935 607 aa11.06□□□□□ -0.64
CPNE3-212ENST00000621783 F11P03951 625 aa11.06□□□□□ -0.64
CPNE3-212ENST00000621783 ADRA1BP35368 520 aa11.06□□□□□ -0.64
CPNE3-212ENST00000621783 TBX4P57082 545 aa11.06□□□□□ -0.64
CPNE3-212ENST00000621783 ADCY2Q08462 1091 aa11.06□□□□□ -0.64
CPNE3-212ENST00000621783 PPP2R5DQ14738 602 aa11.06□□□□□ -0.64
CPNE3-212ENST00000621783 TRIP4Q15650 581 aaPredicted RBP11.06□□□□□ -0.64
CPNE3-212ENST00000621783 CYP1B1Q16678 543 aa11.06□□□□□ -0.64
CPNE3-212ENST00000621783 ARL13BQ3SXY8 428 aa11.06□□□□□ -0.64
CPNE3-212ENST00000621783 PPP6R3Q5H9R7 873 aaPredicted RBP11.06□□□□□ -0.64
CPNE3-212ENST00000621783 BRMS1LQ5PSV4 323 aa11.06□□□□□ -0.64
CPNE3-212ENST00000621783 TMEM150AQ86TG1 271 aa11.06□□□□□ -0.64
CPNE3-212ENST00000621783 VSIG1Q86XK7 387 aa11.06□□□□□ -0.64
CPNE3-212ENST00000621783 RFX6Q8HWS3 928 aa11.06□□□□□ -0.64
CPNE3-212ENST00000621783 MAP7D3Q8IWC1 876 aa11.06□□□□□ -0.64
CPNE3-212ENST00000621783 KLHL7Q8IXQ5 586 aa11.06□□□□□ -0.64
CPNE3-212ENST00000621783 HS6ST3Q8IZP7 471 aa11.06□□□□□ -0.64
CPNE3-212ENST00000621783 PYROXD2Q8N2H3 581 aa11.06□□□□□ -0.64
CPNE3-212ENST00000621783 ELMOD1Q8N336 334 aa11.06□□□□□ -0.64
CPNE3-212ENST00000621783 ZNF276Q8N554 614 aa11.06□□□□□ -0.64
CPNE3-212ENST00000621783 RNF34Q969K3 372 aa11.06□□□□□ -0.64
CPNE3-212ENST00000621783 TIFAQ96CG3 184 aa11.06□□□□□ -0.64
CPNE3-212ENST00000621783 FAF2Q96CS3 445 aa11.06□□□□□ -0.64
CPNE3-212ENST00000621783 SLC39A13Q96H72 371 aa11.06□□□□□ -0.64
CPNE3-212ENST00000621783 FCRL2Q96LA5 508 aaPredicted RBP11.06□□□□□ -0.64
CPNE3-212ENST00000621783 CDK5RAP1Q96SZ6 601 aaKnown RBP11.06□□□□□ -0.64
CPNE3-212ENST00000621783 KRT12Q99456 494 aa11.06□□□□□ -0.64
CPNE3-212ENST00000621783 LRRC3Q9BY71 257 aa11.06□□□□□ -0.64
CPNE3-212ENST00000621783 TKTL2Q9H0I9 626 aa11.06□□□□□ -0.64
CPNE3-212ENST00000621783 DDX47Q9H0S4 455 aaKnown RBP11.06□□□□□ -0.64
CPNE3-212ENST00000621783 PRO3102Q9H379 93 aa11.06□□□□□ -0.64
CPNE3-212ENST00000621783 WDCPQ9H6R7 721 aa11.06□□□□□ -0.64
CPNE3-212ENST00000621783 IL21Q9HBE4 155 aa11.06□□□□□ -0.64
CPNE3-212ENST00000621783 ARHGEF38Q9NXL2 777 aa11.06□□□□□ -0.64
CPNE3-212ENST00000621783 MARCH2Q9P0N8 246 aa11.06□□□□□ -0.64
CPNE3-212ENST00000621783 TLR6Q9Y2C9 796 aa11.06□□□□□ -0.64
CPNE3-212ENST00000621783 EFR3BQ9Y2G0 817 aa11.06□□□□□ -0.64
CPNE3-212ENST00000621783 MTCL1Q9Y4B5 1905 aaKnown RBP11.05□□□□□ -0.64
CPNE3-212ENST00000621783 SLC12A8A0AV02 714 aa11.05□□□□□ -0.64
CPNE3-212ENST00000621783 H3BRJ5 948 aa11.05□□□□□ -0.64
CPNE3-212ENST00000621783 PER2O15055 1255 aa11.05□□□□□ -0.64
CPNE3-212ENST00000621783 COCHO43405 550 aa11.05□□□□□ -0.64
CPNE3-212ENST00000621783 RFPL2O75678 378 aa11.05□□□□□ -0.64
CPNE3-212ENST00000621783 TJP3O95049 919 aa11.05□□□□□ -0.64
CPNE3-212ENST00000621783 OAS1P00973 400 aaKnown RBP11.05□□□□□ -0.64
CPNE3-212ENST00000621783 IGLV3-27P01718 113 aa11.05□□□□□ -0.64
CPNE3-212ENST00000621783 GOT1P17174 413 aa11.05□□□□□ -0.64
CPNE3-212ENST00000621783 IL4RP24394 825 aa11.05□□□□□ -0.64
CPNE3-212ENST00000621783 HOXA9P31269 272 aa11.05□□□□□ -0.64
CPNE3-212ENST00000621783 CCR1P32246 355 aa11.05□□□□□ -0.64
CPNE3-212ENST00000621783 PPP3CCP48454 512 aa11.05□□□□□ -0.64
CPNE3-212ENST00000621783 TUBP50607 506 aa11.05□□□□□ -0.64
CPNE3-212ENST00000621783 TERF1P54274 439 aa11.05□□□□□ -0.64
CPNE3-212ENST00000621783 DYNLT1P63172 113 aa11.05□□□□□ -0.64
CPNE3-212ENST00000621783 SMAD3P84022 425 aaKnown RBP11.05□□□□□ -0.64
CPNE3-212ENST00000621783 SEMA3BQ13214 749 aa11.05□□□□□ -0.64
CPNE3-212ENST00000621783 NAA30Q147X3 362 aaPredicted RBP11.05□□□□□ -0.64
CPNE3-212ENST00000621783 ELF2Q15723 593 aa11.05□□□□□ -0.64
CPNE3-212ENST00000621783 DUSP6Q16828 381 aa11.05□□□□□ -0.64
CPNE3-212ENST00000621783 ERCC6LQ2NKX8 1250 aa11.05□□□□□ -0.64
CPNE3-212ENST00000621783 ANKRD20A8PQ5CZ79 823 aa11.05□□□□□ -0.64
CPNE3-212ENST00000621783 HECTD3Q5T447 861 aa11.05□□□□□ -0.64
CPNE3-212ENST00000621783 C8orf74Q6P047 294 aa11.05□□□□□ -0.64
CPNE3-212ENST00000621783 KLHDC10Q6PID8 442 aa11.05□□□□□ -0.64
CPNE3-212ENST00000621783 BBS12Q6ZW61 710 aa11.05□□□□□ -0.64
CPNE3-212ENST00000621783 RTL10Q7L3V2 364 aa11.05□□□□□ -0.64
CPNE3-212ENST00000621783 TADA2BQ86TJ2 420 aa11.05□□□□□ -0.64
CPNE3-212ENST00000621783 RBM23Q86U06 439 aaKnown RBP11.05□□□□□ -0.64
CPNE3-212ENST00000621783 MIB1Q86YT6 1006 aa11.05□□□□□ -0.64
CPNE3-212ENST00000621783 C12orf50Q8NA57 414 aaPredicted RBP11.05□□□□□ -0.64
CPNE3-212ENST00000621783 TRAF3IP1Q8TDR0 691 aaPredicted RBP11.05□□□□□ -0.64
CPNE3-212ENST00000621783 HDAC7Q8WUI4 952 aa11.05□□□□□ -0.64
CPNE3-212ENST00000621783 C1orf54Q8WWF1 131 aa11.05□□□□□ -0.64
CPNE3-212ENST00000621783 ATG4AQ8WYN0 398 aa11.05□□□□□ -0.64
CPNE3-212ENST00000621783 UBXN4Q92575 508 aa11.05□□□□□ -0.64
CPNE3-212ENST00000621783 HAUS1Q96CS2 278 aa11.05□□□□□ -0.64
CPNE3-212ENST00000621783 CSPG4P5Q96PW8 444 aa11.05□□□□□ -0.64
CPNE3-212ENST00000621783 RNF157Q96PX1 679 aa11.05□□□□□ -0.64
CPNE3-212ENST00000621783 PLEKHA4Q9H4M7 779 aa11.05□□□□□ -0.64
CPNE3-212ENST00000621783 TMEM51Q9NW97 253 aa11.05□□□□□ -0.64
CPNE3-212ENST00000621783 RCOR3Q9P2K3 495 aaPredicted RBP11.05□□□□□ -0.64
CPNE3-212ENST00000621783 DNMT3LQ9UJW3 386 aa11.05□□□□□ -0.64
CPNE3-212ENST00000621783 R3HDM2Q9Y2K5 976 aaKnown RBP11.05□□□□□ -0.64
CPNE3-212ENST00000621783 SNX10Q9Y5X0 201 aa11.05□□□□□ -0.64
CPNE3-212ENST00000621783 HCFC2Q9Y5Z7 792 aa11.05□□□□□ -0.64
CPNE3-212ENST00000621783 ANAPC1Q9H1A4 1944 aa11.04□□□□□ -0.64
CPNE3-212ENST00000621783 C2orf78A6NCI8 922 aa11.04□□□□□ -0.64
CPNE3-212ENST00000621783 KCNU1A8MYU2 1149 aa11.04□□□□□ -0.64
CPNE3-212ENST00000621783 FAM72CH0Y354 149 aa11.04□□□□□ -0.64
CPNE3-212ENST00000621783 RFXAPO00287 272 aa11.04□□□□□ -0.64
CPNE3-212ENST00000621783 EEF2KO00418 725 aaKnown RBP11.04□□□□□ -0.64
CPNE3-212ENST00000621783 APOL1O14791 398 aa11.04□□□□□ -0.64
CPNE3-212ENST00000621783 CST8O60676 142 aa11.04□□□□□ -0.64
CPNE3-212ENST00000621783 PAGE1O75459 146 aa11.04□□□□□ -0.64
CPNE3-212ENST00000621783 MOCS2O96007 188 aaPredicted RBP11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms