RNA–Protein interactions for RNA: ENST00000620996.4

VTA1-205, Transcript of vesicle trafficking 1, humanhuman

TSL 3 BASIC

Gene VTA1, Length 3,272 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1-205ENST00000620996 NBNO60934 754 aa10.29□□□□□ -0.76
VTA1-205ENST00000620996 EOMESO95936 686 aa10.29□□□□□ -0.76
VTA1-205ENST00000620996 IVLP07476 585 aa10.29□□□□□ -0.76
VTA1-205ENST00000620996 APRTP07741 180 aa10.29□□□□□ -0.76
VTA1-205ENST00000620996 CALRP27797 417 aaKnown RBP10.29□□□□□ -0.76
VTA1-205ENST00000620996 DPYSL2Q16555 572 aa10.29□□□□□ -0.76
VTA1-205ENST00000620996 FAM171A1Q5VUB5 890 aa10.29□□□□□ -0.76
VTA1-205ENST00000620996 BSPRYQ5W0U4 402 aa10.29□□□□□ -0.76
VTA1-205ENST00000620996 HEATR6Q6AI08 1181 aaKnown RBP10.29□□□□□ -0.76
VTA1-205ENST00000620996 KCNT2Q6UVM3 1135 aa10.29□□□□□ -0.76
VTA1-205ENST00000620996 CEP128Q6ZU80 1094 aa10.29□□□□□ -0.76
VTA1-205ENST00000620996 CDKL3Q8IVW4 592 aaPredicted RBP10.29□□□□□ -0.76
VTA1-205ENST00000620996 PALM2Q8IXS6 379 aa10.29□□□□□ -0.76
VTA1-205ENST00000620996 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP10.29□□□□□ -0.76
VTA1-205ENST00000620996 ANKRD42Q8N9B4 389 aa10.29□□□□□ -0.76
VTA1-205ENST00000620996 GPR152Q8TDT2 470 aa10.29□□□□□ -0.76
VTA1-205ENST00000620996 RNF139Q8WU17 664 aa10.29□□□□□ -0.76
VTA1-205ENST00000620996 THOC1Q96FV9 657 aaKnown RBP10.29□□□□□ -0.76
VTA1-205ENST00000620996 SUSD3Q96L08 255 aa10.29□□□□□ -0.76
VTA1-205ENST00000620996 SIK2Q9H0K1 926 aa10.29□□□□□ -0.76
VTA1-205ENST00000620996 STMN4Q9H169 189 aaPredicted RBP10.29□□□□□ -0.76
VTA1-205ENST00000620996 FZD10Q9ULW2 581 aa10.29□□□□□ -0.76
VTA1-205ENST00000620996 CHMP2BQ9UQN3 213 aa10.29□□□□□ -0.76
VTA1-205ENST00000620996 SCNN1AP37088 669 aa10.29□□□□□ -0.76
VTA1-205ENST00000620996 C4orf50Q6ZRC1 276 aa10.29□□□□□ -0.76
VTA1-205ENST00000620996 PDIK1LQ8N165 341 aa10.29□□□□□ -0.76
VTA1-205ENST00000620996 ZNF784Q8NCA9 323 aaPredicted RBP10.29□□□□□ -0.76
VTA1-205ENST00000620996 DYDC1Q8WWB3 177 aa10.29□□□□□ -0.76
VTA1-205ENST00000620996 SEPT8Q92599 483 aa10.29□□□□□ -0.76
VTA1-205ENST00000620996 CENPIQ92674 756 aaPredicted RBP10.29□□□□□ -0.76
VTA1-205ENST00000620996 MLXIPLQ9NP71 852 aa10.29□□□□□ -0.76
VTA1-205ENST00000620996 PCDH10Q9P2E7 1040 aa10.29□□□□□ -0.76
VTA1-205ENST00000620996 SHOC2Q9UQ13 582 aa10.29□□□□□ -0.76
VTA1-205ENST00000620996 TBKBP1A7MCY6 615 aa10.28□□□□□ -0.76
VTA1-205ENST00000620996 TMEM63AO94886 807 aa10.28□□□□□ -0.76
VTA1-205ENST00000620996 ENDOD1O94919 500 aa10.28□□□□□ -0.76
VTA1-205ENST00000620996 MOCS2O96007 188 aaPredicted RBP10.28□□□□□ -0.76
VTA1-205ENST00000620996 FAM163BP0C2L3 166 aa10.28□□□□□ -0.76
VTA1-205ENST00000620996 SRGAP2BP0DMP2 458 aa10.28□□□□□ -0.76
VTA1-205ENST00000620996 CPB1P15086 417 aa10.28□□□□□ -0.76
VTA1-205ENST00000620996 ZFXP17010 805 aaPredicted RBP10.28□□□□□ -0.76
VTA1-205ENST00000620996 STIP1P31948 543 aaKnown RBP10.28□□□□□ -0.76
VTA1-205ENST00000620996 MDH1P40925 334 aaKnown RBP10.28□□□□□ -0.76
VTA1-205ENST00000620996 IFNAR2P48551 515 aa10.28□□□□□ -0.76
VTA1-205ENST00000620996 TPI1P60174 286 aa10.28□□□□□ -0.76
VTA1-205ENST00000620996 AUHQ13825 339 aaKnown RBP10.28□□□□□ -0.76
VTA1-205ENST00000620996 ARL13BQ3SXY8 428 aa10.28□□□□□ -0.76
VTA1-205ENST00000620996 FNBP1LQ5T0N5 605 aa10.28□□□□□ -0.76
VTA1-205ENST00000620996 BTBD8Q5XKL5 378 aa10.28□□□□□ -0.76
VTA1-205ENST00000620996 RWDD4Q6NW29 188 aaKnown RBP10.28□□□□□ -0.76
VTA1-205ENST00000620996 TRAF7Q6Q0C0 670 aa10.28□□□□□ -0.76
VTA1-205ENST00000620996 CD300LGQ6UXG3 332 aa10.28□□□□□ -0.76
VTA1-205ENST00000620996 LRRC31Q6UY01 552 aa10.28□□□□□ -0.76
VTA1-205ENST00000620996 ARHGEF18Q6ZSZ5 1173 aa10.28□□□□□ -0.76
VTA1-205ENST00000620996 TADA2BQ86TJ2 420 aa10.28□□□□□ -0.76
VTA1-205ENST00000620996 CFAP36Q96G28 342 aa10.28□□□□□ -0.76
VTA1-205ENST00000620996 NPY6RQ99463 290 aa10.28□□□□□ -0.76
VTA1-205ENST00000620996 LGMNQ99538 433 aa10.28□□□□□ -0.76
VTA1-205ENST00000620996 FTHL17Q9BXU8 183 aa10.28□□□□□ -0.76
VTA1-205ENST00000620996 PHF24Q9UPV7 400 aa10.28□□□□□ -0.76
VTA1-205ENST00000620996 SQORQ9Y6N5 450 aa10.28□□□□□ -0.76
VTA1-205ENST00000620996 A0A087WUV0 522 aaPredicted RBP10.28□□□□□ -0.76
VTA1-205ENST00000620996 M0QZQ0 153 aa10.28□□□□□ -0.76
VTA1-205ENST00000620996 NDUFAB1O14561 156 aa10.28□□□□□ -0.76
VTA1-205ENST00000620996 EIF3HO15372 352 aaKnown RBP eCLIP10.28□□□□□ -0.76
VTA1-205ENST00000620996 TRAPPC3O43617 180 aa10.28□□□□□ -0.76
VTA1-205ENST00000620996 MFSD11O43934 449 aa10.28□□□□□ -0.76
VTA1-205ENST00000620996 AVILO75366 819 aa10.28□□□□□ -0.76
VTA1-205ENST00000620996 RPL34P49207 117 aaKnown RBP10.28□□□□□ -0.76
VTA1-205ENST00000620996 SEC24CP53992 1094 aa10.28□□□□□ -0.76
VTA1-205ENST00000620996 CORO7P57737 925 aa10.28□□□□□ -0.76
VTA1-205ENST00000620996 YWHAGP61981 247 aaKnown RBP eCLIP10.28□□□□□ -0.76
VTA1-205ENST00000620996 MAPRE1Q15691 268 aaKnown RBP10.28□□□□□ -0.76
VTA1-205ENST00000620996 DDR2Q16832 855 aa10.28□□□□□ -0.76
VTA1-205ENST00000620996 CTXN3Q4LDR2 81 aa10.28□□□□□ -0.76
VTA1-205ENST00000620996 SLC9A4Q6AI14 798 aa10.28□□□□□ -0.76
VTA1-205ENST00000620996 FAM117BQ6P1L5 589 aa10.28□□□□□ -0.76
VTA1-205ENST00000620996 FBXO36Q8NEA4 188 aa10.28□□□□□ -0.76
VTA1-205ENST00000620996 ARHGEF2Q92974 986 aaKnown RBP10.28□□□□□ -0.76
VTA1-205ENST00000620996 KLC2Q9H0B6 622 aa10.28□□□□□ -0.76
VTA1-205ENST00000620996 WDCPQ9H6R7 721 aa10.28□□□□□ -0.76
VTA1-205ENST00000620996 MTMR10Q9NXD2 777 aa10.28□□□□□ -0.76
VTA1-205ENST00000620996 PAK5Q9P286 719 aa10.28□□□□□ -0.76
VTA1-205ENST00000620996 PCDHB8Q9UN66 801 aa10.28□□□□□ -0.76
VTA1-205ENST00000620996 NDC80O14777 642 aa10.27□□□□□ -0.76
VTA1-205ENST00000620996 SOAT2O75908 522 aa10.27□□□□□ -0.76
VTA1-205ENST00000620996 FYNP06241 537 aa10.27□□□□□ -0.76
VTA1-205ENST00000620996 SSTR1P30872 391 aa10.27□□□□□ -0.76
VTA1-205ENST00000620996 HNRNPH1P31943 449 aaKnown RBP10.27□□□□□ -0.76
VTA1-205ENST00000620996 LSP1P33241 339 aa10.27□□□□□ -0.76
VTA1-205ENST00000620996 GPR15P49685 360 aa10.27□□□□□ -0.76
VTA1-205ENST00000620996 SLC5A3P53794 718 aa10.27□□□□□ -0.76
VTA1-205ENST00000620996 SLC10A2Q12908 348 aaPredicted RBP10.27□□□□□ -0.76
VTA1-205ENST00000620996 OTUD1Q5VV17 481 aaPredicted RBP10.27□□□□□ -0.76
VTA1-205ENST00000620996 NCBP2-AS2Q69YL0 99 aa10.27□□□□□ -0.76
VTA1-205ENST00000620996 DENND5BQ6ZUT9 1274 aa10.27□□□□□ -0.76
VTA1-205ENST00000620996 CROCCP2Q86T23 111 aa10.27□□□□□ -0.76
VTA1-205ENST00000620996 SRRM1Q8IYB3 904 aaKnown RBP10.27□□□□□ -0.76
VTA1-205ENST00000620996 C11orf84Q9BUA3 381 aaPredicted RBP10.27□□□□□ -0.76
VTA1-205ENST00000620996 CFHR5Q9BXR6 569 aa10.27□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms