RNA–Protein interactions for RNA: ENST00000620393.4

CPNE3-209, Transcript of copine 3, humanhuman

TSL 5

Gene CPNE3, Length 680 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-209ENST00000620393 SLTMQ9NWH9 1034 aaKnown RBP eCLIP8.35□□□□□ -1.07
CPNE3-209ENST00000620393 HCFC1R1Q9NWW0 138 aa8.35□□□□□ -1.07
CPNE3-209ENST00000620393 DDIT4Q9NX09 232 aa8.35□□□□□ -1.07
CPNE3-209ENST00000620393 DDX56Q9NY93 547 aaKnown RBP8.35□□□□□ -1.07
CPNE3-209ENST00000620393 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP8.35□□□□□ -1.07
CPNE3-209ENST00000620393 MARCH2Q9P0N8 246 aa8.35□□□□□ -1.07
CPNE3-209ENST00000620393 SNX12Q9UMY4 172 aa8.35□□□□□ -1.07
CPNE3-209ENST00000620393 SAR1BQ9Y6B6 198 aa8.35□□□□□ -1.07
CPNE3-209ENST00000620393 SYNJ2BP-COX16A0A087WUM0 186 aa8.34□□□□□ -1.07
CPNE3-209ENST00000620393 A0A1W2PRU2 124 aa8.34□□□□□ -1.07
CPNE3-209ENST00000620393 SLC12A8A0AV02 714 aa8.34□□□□□ -1.07
CPNE3-209ENST00000620393 KCNU1A8MYU2 1149 aa8.34□□□□□ -1.07
CPNE3-209ENST00000620393 CES2O00748 559 aa8.34□□□□□ -1.07
CPNE3-209ENST00000620393 KCNK3O14649 394 aa8.34□□□□□ -1.07
CPNE3-209ENST00000620393 ZNF197O14709 1029 aa8.34□□□□□ -1.07
CPNE3-209ENST00000620393 MDM4O15151 490 aa8.34□□□□□ -1.07
CPNE3-209ENST00000620393 IRAK2O43187 625 aa8.34□□□□□ -1.07
CPNE3-209ENST00000620393 COCHO43405 550 aa8.34□□□□□ -1.07
CPNE3-209ENST00000620393 MOSPD3O75425 235 aa8.34□□□□□ -1.07
CPNE3-209ENST00000620393 URI1O94763 535 aaPredicted RBP8.34□□□□□ -1.07
CPNE3-209ENST00000620393 GLP2RO95838 553 aa8.34□□□□□ -1.07
CPNE3-209ENST00000620393 OAS1P00973 400 aaKnown RBP8.34□□□□□ -1.07
CPNE3-209ENST00000620393 SRGAP2BP0DMP2 458 aa8.34□□□□□ -1.07
CPNE3-209ENST00000620393 SLC2A3P11169 496 aa8.34□□□□□ -1.07
CPNE3-209ENST00000620393 HDCP19113 662 aa8.34□□□□□ -1.07
CPNE3-209ENST00000620393 DDX6P26196 483 aaKnown RBP eCLIP8.34□□□□□ -1.07
CPNE3-209ENST00000620393 CCR1P32246 355 aa8.34□□□□□ -1.07
CPNE3-209ENST00000620393 CCR2P41597 374 aa8.34□□□□□ -1.07
CPNE3-209ENST00000620393 DNA2P51530 1060 aa8.34□□□□□ -1.07
CPNE3-209ENST00000620393 AIF1P55008 147 aa8.34□□□□□ -1.07
CPNE3-209ENST00000620393 TBX4P57082 545 aa8.34□□□□□ -1.07
CPNE3-209ENST00000620393 COG7P83436 770 aa8.34□□□□□ -1.07
CPNE3-209ENST00000620393 PPP2R5DQ14738 602 aa8.34□□□□□ -1.07
CPNE3-209ENST00000620393 TRIP4Q15650 581 aaPredicted RBP8.34□□□□□ -1.07
CPNE3-209ENST00000620393 CTC1Q2NKJ3 1217 aa8.34□□□□□ -1.07
CPNE3-209ENST00000620393 ARL13BQ3SXY8 428 aa8.34□□□□□ -1.07
CPNE3-209ENST00000620393 ZC3H12AQ5D1E8 599 aaKnown RBP8.34□□□□□ -1.07
CPNE3-209ENST00000620393 KCNT1Q5JUK3 1230 aa8.34□□□□□ -1.07
CPNE3-209ENST00000620393 PRSS36Q5K4E3 855 aa8.34□□□□□ -1.07
CPNE3-209ENST00000620393 BRMS1LQ5PSV4 323 aa8.34□□□□□ -1.07
CPNE3-209ENST00000620393 TXNDC8Q6A555 127 aa8.34□□□□□ -1.07
CPNE3-209ENST00000620393 ANKRD54Q6NXT1 300 aa8.34□□□□□ -1.07
CPNE3-209ENST00000620393 SYCE2Q6PIF2 218 aa8.34□□□□□ -1.07
CPNE3-209ENST00000620393 TMC5Q6UXY8 1006 aa8.34□□□□□ -1.07
CPNE3-209ENST00000620393 CYP4V2Q6ZWL3 525 aaPredicted RBP8.34□□□□□ -1.07
CPNE3-209ENST00000620393 PDZD4Q76G19 769 aaPredicted RBP8.34□□□□□ -1.07
CPNE3-209ENST00000620393 GRASPQ7Z6J2 395 aaPredicted RBP8.34□□□□□ -1.07
CPNE3-209ENST00000620393 GPR149Q86SP6 731 aa8.34□□□□□ -1.07
CPNE3-209ENST00000620393 FAM131BQ86XD5 332 aa8.34□□□□□ -1.07
CPNE3-209ENST00000620393 KATNAL2Q8IYT4 538 aa8.34□□□□□ -1.07
CPNE3-209ENST00000620393 EXD1Q8NHP7 514 aa8.34□□□□□ -1.07
CPNE3-209ENST00000620393 SHKBP1Q8TBC3 707 aa8.34□□□□□ -1.07
CPNE3-209ENST00000620393 SMG7Q92540 1137 aaKnown RBP8.34□□□□□ -1.07
CPNE3-209ENST00000620393 ALG3Q92685 438 aa8.34□□□□□ -1.07
CPNE3-209ENST00000620393 RNF34Q969K3 372 aa8.34□□□□□ -1.07
CPNE3-209ENST00000620393 NTAN1Q96AB6 310 aa8.34□□□□□ -1.07
CPNE3-209ENST00000620393 LRCH3Q96II8 777 aa8.34□□□□□ -1.07
CPNE3-209ENST00000620393 SERPINB11Q96P15 392 aa8.34□□□□□ -1.07
CPNE3-209ENST00000620393 PEBP4Q96S96 227 aa8.34□□□□□ -1.07
CPNE3-209ENST00000620393 CYP2S1Q96SQ9 504 aa8.34□□□□□ -1.07
CPNE3-209ENST00000620393 OSBPL9Q96SU4 736 aa8.34□□□□□ -1.07
CPNE3-209ENST00000620393 SLC46A2Q9BY10 475 aa8.34□□□□□ -1.07
CPNE3-209ENST00000620393 CARD9Q9H257 536 aa8.34□□□□□ -1.07
CPNE3-209ENST00000620393 ZWILCHQ9H900 591 aa8.34□□□□□ -1.07
CPNE3-209ENST00000620393 PIDD1Q9HB75 910 aa8.34□□□□□ -1.07
CPNE3-209ENST00000620393 RRAGDQ9NQL2 400 aaPredicted RBP8.34□□□□□ -1.07
CPNE3-209ENST00000620393 ARHGEF38Q9NXL2 777 aa8.34□□□□□ -1.07
CPNE3-209ENST00000620393 COX16Q9P0S2 106 aa8.34□□□□□ -1.07
CPNE3-209ENST00000620393 TLR6Q9Y2C9 796 aa8.34□□□□□ -1.07
CPNE3-209ENST00000620393 HBS1LQ9Y450 684 aaKnown RBP8.34□□□□□ -1.07
CPNE3-209ENST00000620393 MYO7AQ13402 2215 aa8.34□□□□□ -1.07
CPNE3-209ENST00000620393 CHD9Q3L8U1 2897 aa8.34□□□□□ -1.07
CPNE3-209ENST00000620393 KIAA1671Q9BY89 1806 aa8.33□□□□□ -1.08
CPNE3-209ENST00000620393 TNRC18O15417 2968 aaPredicted RBP8.33□□□□□ -1.08
CPNE3-209ENST00000620393 C2orf78A6NCI8 922 aa8.33□□□□□ -1.08
CPNE3-209ENST00000620393 GOLGA8CPA6NN73 597 aa8.33□□□□□ -1.08
CPNE3-209ENST00000620393 LINC01565O15544 149 aa8.33□□□□□ -1.08
CPNE3-209ENST00000620393 MSI1O43347 362 aaKnown RBP8.33□□□□□ -1.08
CPNE3-209ENST00000620393 SRGAP2O75044 1071 aa8.33□□□□□ -1.08
CPNE3-209ENST00000620393 OLFM2O95897 454 aa8.33□□□□□ -1.08
CPNE3-209ENST00000620393 PYGMP11217 842 aa8.33□□□□□ -1.08
CPNE3-209ENST00000620393 GJA1P17302 382 aa8.33□□□□□ -1.08
CPNE3-209ENST00000620393 IGFBP4P22692 258 aa8.33□□□□□ -1.08
CPNE3-209ENST00000620393 KDELR1P24390 212 aa8.33□□□□□ -1.08
CPNE3-209ENST00000620393 CXCR5P32302 372 aa8.33□□□□□ -1.08
CPNE3-209ENST00000620393 CETN2P41208 172 aa8.33□□□□□ -1.08
CPNE3-209ENST00000620393 MARCKSL1P49006 195 aa8.33□□□□□ -1.08
CPNE3-209ENST00000620393 ARSEP51690 589 aa8.33□□□□□ -1.08
CPNE3-209ENST00000620393 MLLT6P55198 1093 aaPredicted RBP8.33□□□□□ -1.08
CPNE3-209ENST00000620393 COPS2P61201 443 aa8.33□□□□□ -1.08
CPNE3-209ENST00000620393 NTHL1P78549 312 aa8.33□□□□□ -1.08
CPNE3-209ENST00000620393 SLC7A9P82251 487 aa8.33□□□□□ -1.08
CPNE3-209ENST00000620393 RING1Q06587 406 aa8.33□□□□□ -1.08
CPNE3-209ENST00000620393 SCAPQ12770 1279 aa8.33□□□□□ -1.08
CPNE3-209ENST00000620393 MTA1Q13330 715 aa8.33□□□□□ -1.08
CPNE3-209ENST00000620393 COL19A1Q14993 1142 aa8.33□□□□□ -1.08
CPNE3-209ENST00000620393 PDK2Q15119 407 aa8.33□□□□□ -1.08
CPNE3-209ENST00000620393 ARHGAP15Q53QZ3 475 aa8.33□□□□□ -1.08
CPNE3-209ENST00000620393 RARS2Q5T160 578 aaKnown RBP8.33□□□□□ -1.08
CPNE3-209ENST00000620393 ZFYVE27Q5T4F4 411 aa8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms