RNA–Protein interactions for RNA: ENST00000619035.4

TNFAIP3-209, Transcript of TNF alpha induced protein 3, humanhuman

TSL 5 BASIC

Gene TNFAIP3, Length 2,267 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-209ENST00000619035 CDC42EP4Q9H3Q1 356 aaKnown RBP13.18□□□□□ -0.3
TNFAIP3-209ENST00000619035 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP13.18□□□□□ -0.3
TNFAIP3-209ENST00000619035 PCDHB5Q9Y5E4 795 aa13.18□□□□□ -0.3
TNFAIP3-209ENST00000619035 VWA8A3KMH1 1905 aa13.18□□□□□ -0.3
TNFAIP3-209ENST00000619035 PTPRDP23468 1912 aa13.18□□□□□ -0.3
TNFAIP3-209ENST00000619035 OR6C75A6NL08 312 aa13.18□□□□□ -0.3
TNFAIP3-209ENST00000619035 ZNF487B1APH4 448 aa13.18□□□□□ -0.3
TNFAIP3-209ENST00000619035 KIAA0355O15063 1070 aa13.18□□□□□ -0.3
TNFAIP3-209ENST00000619035 SOAT2O75908 522 aa13.18□□□□□ -0.3
TNFAIP3-209ENST00000619035 TIMP1P01033 207 aa13.18□□□□□ -0.3
TNFAIP3-209ENST00000619035 CSF2RAP15509 400 aa13.18□□□□□ -0.3
TNFAIP3-209ENST00000619035 ITGB8P26012 769 aa13.18□□□□□ -0.3
TNFAIP3-209ENST00000619035 NRLP54845 237 aa13.18□□□□□ -0.3
TNFAIP3-209ENST00000619035 SMARCB1Q12824 385 aa13.18□□□□□ -0.3
TNFAIP3-209ENST00000619035 MRPL58Q14197 206 aaKnown RBP13.18□□□□□ -0.3
TNFAIP3-209ENST00000619035 NOMO1Q15155 1222 aa13.18□□□□□ -0.3
TNFAIP3-209ENST00000619035 EFHC2Q5JST6 749 aa13.18□□□□□ -0.3
TNFAIP3-209ENST00000619035 UNC45BQ8IWX7 931 aa13.18□□□□□ -0.3
TNFAIP3-209ENST00000619035 CCHCR1Q8TD31 782 aa13.18□□□□□ -0.3
TNFAIP3-209ENST00000619035 LRRN4Q8WUT4 740 aa13.18□□□□□ -0.3
TNFAIP3-209ENST00000619035 VWCEQ96DN2 955 aa13.18□□□□□ -0.3
TNFAIP3-209ENST00000619035 RRN3Q9NYV6 651 aa13.18□□□□□ -0.3
TNFAIP3-209ENST00000619035 CWC15Q9P013 229 aaKnown RBP13.18□□□□□ -0.3
TNFAIP3-209ENST00000619035 USP3Q9Y6I4 520 aa13.18□□□□□ -0.3
TNFAIP3-209ENST00000619035 LTBP2Q14767 1821 aa13.17□□□□□ -0.3
TNFAIP3-209ENST00000619035 TNFRSF10BO14763 440 aa13.17□□□□□ -0.3
TNFAIP3-209ENST00000619035 DGKIO75912 1065 aa13.17□□□□□ -0.3
TNFAIP3-209ENST00000619035 RARGP13631 454 aa13.17□□□□□ -0.3
TNFAIP3-209ENST00000619035 TGM2P21980 687 aa13.17□□□□□ -0.3
TNFAIP3-209ENST00000619035 YWHAGP61981 247 aaKnown RBP eCLIP13.17□□□□□ -0.3
TNFAIP3-209ENST00000619035 SLC9A4Q6AI14 798 aa13.17□□□□□ -0.3
TNFAIP3-209ENST00000619035 PRSS55Q6UWB4 352 aaPredicted RBP13.17□□□□□ -0.3
TNFAIP3-209ENST00000619035 RSPO2Q6UXX9 243 aaPredicted RBP13.17□□□□□ -0.3
TNFAIP3-209ENST00000619035 BNIPLQ7Z465 357 aa13.17□□□□□ -0.3
TNFAIP3-209ENST00000619035 RNF34Q969K3 372 aa13.17□□□□□ -0.3
TNFAIP3-209ENST00000619035 TTPALQ9BTX7 342 aa13.17□□□□□ -0.3
TNFAIP3-209ENST00000619035 PCDH9Q9HC56 1237 aa13.17□□□□□ -0.3
TNFAIP3-209ENST00000619035 TMEM51Q9NW97 253 aa13.17□□□□□ -0.3
TNFAIP3-209ENST00000619035 SLC27A5Q9Y2P5 690 aa13.17□□□□□ -0.3
TNFAIP3-209ENST00000619035 TRIM43BA6NCK2 446 aa13.16□□□□□ -0.3
TNFAIP3-209ENST00000619035 NUDT17P0C025 328 aa13.16□□□□□ -0.3
TNFAIP3-209ENST00000619035 AMPD1P23109 780 aa13.16□□□□□ -0.3
TNFAIP3-209ENST00000619035 IFI35P80217 286 aaPredicted RBP13.16□□□□□ -0.3
TNFAIP3-209ENST00000619035 GBE1Q04446 702 aa13.16□□□□□ -0.3
TNFAIP3-209ENST00000619035 HP1BP3Q5SSJ5 553 aaPredicted RBP13.16□□□□□ -0.3
TNFAIP3-209ENST00000619035 BTBD8Q5XKL5 378 aa13.16□□□□□ -0.3
TNFAIP3-209ENST00000619035 BEND5Q7L4P6 421 aa13.16□□□□□ -0.3
TNFAIP3-209ENST00000619035 TAC4Q86UU9 113 aa13.16□□□□□ -0.3
TNFAIP3-209ENST00000619035 PSTKQ8IV42 348 aaKnown RBP13.16□□□□□ -0.3
TNFAIP3-209ENST00000619035 BBOF1Q8ND07 529 aa13.16□□□□□ -0.3
TNFAIP3-209ENST00000619035 RNF139Q8WU17 664 aa13.16□□□□□ -0.3
TNFAIP3-209ENST00000619035 TRIM43Q96BQ3 446 aaPredicted RBP13.16□□□□□ -0.3
TNFAIP3-209ENST00000619035 FAF2Q96CS3 445 aa13.16□□□□□ -0.3
TNFAIP3-209ENST00000619035 SEPT5Q99719 369 aaPredicted RBP13.16□□□□□ -0.3
TNFAIP3-209ENST00000619035 FAM129AQ9BZQ8 928 aa13.16□□□□□ -0.3
TNFAIP3-209ENST00000619035 WDR6Q9NNW5 1121 aaKnown RBP13.16□□□□□ -0.3
TNFAIP3-209ENST00000619035 NUDT5Q9UKK9 219 aa13.16□□□□□ -0.3
TNFAIP3-209ENST00000619035 MFHAS1Q9Y4C4 1052 aa13.16□□□□□ -0.3
TNFAIP3-209ENST00000619035 FOXO6A8MYZ6 492 aa13.16□□□□□ -0.3
TNFAIP3-209ENST00000619035 H7C4K7 107 aa13.16□□□□□ -0.3
TNFAIP3-209ENST00000619035 C2CD2LO14523 706 aa13.16□□□□□ -0.3
TNFAIP3-209ENST00000619035 TRIM66O15016 1216 aa13.16□□□□□ -0.3
TNFAIP3-209ENST00000619035 EIF3HO15372 352 aaKnown RBP eCLIP13.16□□□□□ -0.39e-8■■■□□ 18.9
TNFAIP3-209ENST00000619035 ACRP10323 421 aa13.16□□□□□ -0.3
TNFAIP3-209ENST00000619035 RAG1P15918 1043 aa13.16□□□□□ -0.3
TNFAIP3-209ENST00000619035 PGFP49763 221 aa13.16□□□□□ -0.3
TNFAIP3-209ENST00000619035 DEFB103AP81534 67 aa13.16□□□□□ -0.3
TNFAIP3-209ENST00000619035 CAV1Q03135 178 aa13.16□□□□□ -0.3
TNFAIP3-209ENST00000619035 SLMAPQ14BN4 828 aa13.16□□□□□ -0.3
TNFAIP3-209ENST00000619035 KYNUQ16719 465 aa13.16□□□□□ -0.3
TNFAIP3-209ENST00000619035 MGAT5BQ3V5L5 792 aa13.16□□□□□ -0.3
TNFAIP3-209ENST00000619035 VSTM1Q6UX27 236 aa13.16□□□□□ -0.3
TNFAIP3-209ENST00000619035 RNF19BQ6ZMZ0 732 aa13.16□□□□□ -0.3
TNFAIP3-209ENST00000619035 DQX1Q8TE96 717 aaKnown RBP13.16□□□□□ -0.3
TNFAIP3-209ENST00000619035 ADAM7Q9H2U9 754 aa13.16□□□□□ -0.3
TNFAIP3-209ENST00000619035 WDCPQ9H6R7 721 aa13.16□□□□□ -0.3
TNFAIP3-209ENST00000619035 ANLNQ9NQW6 1124 aa13.16□□□□□ -0.3
TNFAIP3-209ENST00000619035 ETNK2Q9NVF9 386 aa13.16□□□□□ -0.3
TNFAIP3-209ENST00000619035 KIAA0100Q14667 2235 aaKnown RBP13.16□□□□□ -0.3
TNFAIP3-209ENST00000619035 PATJQ8NI35 1801 aa13.16□□□□□ -0.3
TNFAIP3-209ENST00000619035 DNALI1O14645 258 aaPredicted RBP13.15□□□□□ -0.3
TNFAIP3-209ENST00000619035 AMHP03971 560 aa13.15□□□□□ -0.3
TNFAIP3-209ENST00000619035 ADRA1BP35368 520 aa13.15□□□□□ -0.3
TNFAIP3-209ENST00000619035 AIF1P55008 147 aa13.15□□□□□ -0.3
TNFAIP3-209ENST00000619035 LONRF1Q17RB8 773 aa13.15□□□□□ -0.3
TNFAIP3-209ENST00000619035 ARL13BQ3SXY8 428 aa13.15□□□□□ -0.3
TNFAIP3-209ENST00000619035 AGBL2Q5U5Z8 902 aa13.15□□□□□ -0.3
TNFAIP3-209ENST00000619035 HIBCHQ6NVY1 386 aaPredicted RBP13.15□□□□□ -0.3
TNFAIP3-209ENST00000619035 ANKS3Q6ZW76 656 aa13.15□□□□□ -0.3
TNFAIP3-209ENST00000619035 NUP93Q8N1F7 819 aa13.15□□□□□ -0.3
TNFAIP3-209ENST00000619035 TMEM199Q8N511 208 aa13.15□□□□□ -0.3
TNFAIP3-209ENST00000619035 MDM1Q8TC05 714 aa13.15□□□□□ -0.3
TNFAIP3-209ENST00000619035 TOP1MTQ969P6 601 aa13.15□□□□□ -0.3
TNFAIP3-209ENST00000619035 C9orf72Q96LT7 481 aa13.15□□□□□ -0.3
TNFAIP3-209ENST00000619035 CWH43Q9H720 699 aa13.15□□□□□ -0.3
TNFAIP3-209ENST00000619035 PRDM16Q9HAZ2 1276 aa13.15□□□□□ -0.3
TNFAIP3-209ENST00000619035 FBXW11Q9UKB1 542 aa13.15□□□□□ -0.3
TNFAIP3-209ENST00000619035 TPX2Q9ULW0 747 aaKnown RBP13.15□□□□□ -0.3
TNFAIP3-209ENST00000619035 CDY1Q9Y6F8 540 aa13.15□□□□□ -0.3
TNFAIP3-209ENST00000619035 A0A1W2PQH9 124 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms