RNA–Protein interactions for RNA: ENST00000618999.4

SRGAP3-213, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 5 BASIC

Gene SRGAP3, Length 3,929 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-213ENST00000618999 BRSK2Q8IWQ3 736 aa7.24□□□□□ -1.25
SRGAP3-213ENST00000618999 SCUBE1Q8IWY4 988 aa7.24□□□□□ -1.25
SRGAP3-213ENST00000618999 SLC7A6OSQ96CW6 309 aaPredicted RBP7.24□□□□□ -1.25
SRGAP3-213ENST00000618999 CFAP36Q96G28 342 aa7.24□□□□□ -1.25
SRGAP3-213ENST00000618999 SYT15Q9BQS2 421 aa7.24□□□□□ -1.25
SRGAP3-213ENST00000618999 CADM1Q9BY67 442 aaKnown RBP7.24□□□□□ -1.25
SRGAP3-213ENST00000618999 ARL8BQ9NVJ2 186 aa7.24□□□□□ -1.25
SRGAP3-213ENST00000618999 XPO7Q9UIA9 1087 aaKnown RBP7.24□□□□□ -1.25
SRGAP3-213ENST00000618999 CCDC195A0A1B0GUA6 201 aa7.23□□□□□ -1.25
SRGAP3-213ENST00000618999 H7C0C1 242 aa7.23□□□□□ -1.25
SRGAP3-213ENST00000618999 KPNA6O60684 536 aa7.23□□□□□ -1.25
SRGAP3-213ENST00000618999 RNF8O76064 485 aa7.23□□□□□ -1.25
SRGAP3-213ENST00000618999 CTSHP09668 335 aa7.23□□□□□ -1.25
SRGAP3-213ENST00000618999 STAG3L1P0CL83 205 aa7.23□□□□□ -1.25
SRGAP3-213ENST00000618999 HOXD8P13378 290 aaPredicted RBP7.23□□□□□ -1.25
SRGAP3-213ENST00000618999 CYBAP13498 195 aa7.23□□□□□ -1.25
SRGAP3-213ENST00000618999 RANBP1P43487 201 aa7.23□□□□□ -1.25
SRGAP3-213ENST00000618999 ATP5OP48047 213 aa7.23□□□□□ -1.25
SRGAP3-213ENST00000618999 WNT7BP56706 349 aa7.23□□□□□ -1.25
SRGAP3-213ENST00000618999 PURAQ00577 322 aaKnown RBP7.23□□□□□ -1.25
SRGAP3-213ENST00000618999 PTP4A2Q12974 167 aa7.23□□□□□ -1.25
SRGAP3-213ENST00000618999 GSTA3Q16772 222 aa7.23□□□□□ -1.25
SRGAP3-213ENST00000618999 CMPK2Q5EBM0 449 aa7.23□□□□□ -1.25
SRGAP3-213ENST00000618999 LLGL2Q6P1M3 1020 aa7.23□□□□□ -1.25
SRGAP3-213ENST00000618999 RFWD3Q6PCD5 774 aa7.23□□□□□ -1.25
SRGAP3-213ENST00000618999 DARS2Q6PI48 645 aaKnown RBP7.23□□□□□ -1.25
SRGAP3-213ENST00000618999 SPOCD1Q6ZMY3 1216 aa7.23□□□□□ -1.25
SRGAP3-213ENST00000618999 ANKS1BQ7Z6G8 1248 aa7.23□□□□□ -1.25
SRGAP3-213ENST00000618999 RSPH3Q86UC2 560 aa7.23□□□□□ -1.25
SRGAP3-213ENST00000618999 ZNF410Q86VK4 478 aa7.23□□□□□ -1.25
SRGAP3-213ENST00000618999 RELL1Q8IUW5 271 aa7.23□□□□□ -1.25
SRGAP3-213ENST00000618999 ALLCQ8N6M5 410 aa7.23□□□□□ -1.25
SRGAP3-213ENST00000618999 PPM1NQ8N819 430 aa7.23□□□□□ -1.25
SRGAP3-213ENST00000618999 ZNF513Q8N8E2 541 aaPredicted RBP7.23□□□□□ -1.25
SRGAP3-213ENST00000618999 RFWD2Q8NHY2 731 aa7.23□□□□□ -1.25
SRGAP3-213ENST00000618999 UCMAQ8WVF2 138 aa7.23□□□□□ -1.25
SRGAP3-213ENST00000618999 ZNF516Q92618 1163 aa7.23□□□□□ -1.25
SRGAP3-213ENST00000618999 OXNAD1Q96HP4 312 aaPredicted RBP7.23□□□□□ -1.25
SRGAP3-213ENST00000618999 ANKRD36BP1Q96IX9 119 aa7.23□□□□□ -1.25
SRGAP3-213ENST00000618999 ACAP3Q96P50 834 aa7.23□□□□□ -1.25
SRGAP3-213ENST00000618999 CALN1Q9BXU9 219 aa7.23□□□□□ -1.25
SRGAP3-213ENST00000618999 MTMR12Q9C0I1 747 aa7.23□□□□□ -1.25
SRGAP3-213ENST00000618999 PFDN2Q9UHV9 154 aa7.23□□□□□ -1.25
SRGAP3-213ENST00000618999 MROH7Q68CQ1 1323 aa7.23□□□□□ -1.25
SRGAP3-213ENST00000618999 KRT7P08729 469 aa7.23□□□□□ -1.25
SRGAP3-213ENST00000618999 BGNP21810 368 aa7.23□□□□□ -1.25
SRGAP3-213ENST00000618999 EIF4BP23588 611 aaKnown RBP7.23□□□□□ -1.25
SRGAP3-213ENST00000618999 MED21Q13503 144 aa7.23□□□□□ -1.25
SRGAP3-213ENST00000618999 PIGHQ14442 188 aaPredicted RBP7.23□□□□□ -1.25
SRGAP3-213ENST00000618999 ZACNQ401N2 412 aa7.23□□□□□ -1.25
SRGAP3-213ENST00000618999 MAP3K21Q5TCX8 1036 aa7.23□□□□□ -1.25
SRGAP3-213ENST00000618999 TDRD10Q5VZ19 366 aaKnown RBP7.23□□□□□ -1.25
SRGAP3-213ENST00000618999 TMPRSS6Q8IU80 811 aa7.23□□□□□ -1.25
SRGAP3-213ENST00000618999 NUDCD3Q8IVD9 361 aa7.23□□□□□ -1.25
SRGAP3-213ENST00000618999 ARID3BQ8IVW6 561 aaPredicted RBP7.23□□□□□ -1.25
SRGAP3-213ENST00000618999 KCTD6Q8NC69 237 aa7.23□□□□□ -1.25
SRGAP3-213ENST00000618999 PPP4R1Q8TF05 950 aa7.23□□□□□ -1.25
SRGAP3-213ENST00000618999 TMEM174Q8WUU8 243 aa7.23□□□□□ -1.25
SRGAP3-213ENST00000618999 ATP2A3Q93084 1043 aa7.23□□□□□ -1.25
SRGAP3-213ENST00000618999 ACSF2Q96CM8 615 aaPredicted RBP7.23□□□□□ -1.25
SRGAP3-213ENST00000618999 VCPIP1Q96JH7 1222 aa7.23□□□□□ -1.25
SRGAP3-213ENST00000618999 CGRRF1Q99675 332 aa7.23□□□□□ -1.25
SRGAP3-213ENST00000618999 MIS12Q9H081 205 aa7.23□□□□□ -1.25
SRGAP3-213ENST00000618999 MMADHCQ9H3L0 296 aaPredicted RBP7.23□□□□□ -1.25
SRGAP3-213ENST00000618999 Q9H521 79 aa7.23□□□□□ -1.25
SRGAP3-213ENST00000618999 SMYD3Q9H7B4 428 aa7.23□□□□□ -1.25
SRGAP3-213ENST00000618999 FBXO6Q9NRD1 293 aaPredicted RBP7.23□□□□□ -1.25
SRGAP3-213ENST00000618999 ARMCX1Q9P291 453 aa7.23□□□□□ -1.25
SRGAP3-213ENST00000618999 STX18Q9P2W9 335 aaKnown RBP7.23□□□□□ -1.25
SRGAP3-213ENST00000618999 NXF1Q9UBU9 619 aaKnown RBP7.23□□□□□ -1.25
SRGAP3-213ENST00000618999 PIN4Q9Y237 131 aaKnown RBP7.23□□□□□ -1.25
SRGAP3-213ENST00000618999 SMIM35A0A1B0GVV1 85 aa7.23□□□□□ -1.25
SRGAP3-213ENST00000618999 TRAFD1O14545 582 aaPredicted RBP7.23□□□□□ -1.25
SRGAP3-213ENST00000618999 PMM2O15305 246 aa7.23□□□□□ -1.25
SRGAP3-213ENST00000618999 ASGR1P07306 291 aa7.23□□□□□ -1.25
SRGAP3-213ENST00000618999 ALDH18A1P54886 795 aaKnown RBP7.23□□□□□ -1.25
SRGAP3-213ENST00000618999 TAP1Q03518 808 aa7.23□□□□□ -1.25
SRGAP3-213ENST00000618999 MAMLD1Q13495 774 aa7.23□□□□□ -1.25
SRGAP3-213ENST00000618999 LARP7Q4G0J3 582 aaKnown RBP eCLIP7.23□□□□□ -1.25
SRGAP3-213ENST00000618999 RAVER1Q8IY67 606 aaKnown RBP7.23□□□□□ -1.25
SRGAP3-213ENST00000618999 SLC13A1Q9BZW2 595 aa7.23□□□□□ -1.25
SRGAP3-213ENST00000618999 SSU72Q9NP77 194 aaKnown RBP7.23□□□□□ -1.25
SRGAP3-213ENST00000618999 MARCOQ9UEW3 520 aaPredicted RBP7.23□□□□□ -1.25
SRGAP3-213ENST00000618999 DYTNA2CJ06 578 aa7.22□□□□□ -1.25
SRGAP3-213ENST00000618999 CST8O60676 142 aa7.22□□□□□ -1.25
SRGAP3-213ENST00000618999 FBXO24O75426 580 aa7.22□□□□□ -1.25
SRGAP3-213ENST00000618999 KRT38O76015 456 aa7.22□□□□□ -1.25
SRGAP3-213ENST00000618999 RAB27AP51159 221 aa7.22□□□□□ -1.25
SRGAP3-213ENST00000618999 GJA9P57773 515 aa7.22□□□□□ -1.25
SRGAP3-213ENST00000618999 POU5F1BQ06416 359 aa7.22□□□□□ -1.25
SRGAP3-213ENST00000618999 KCNA10Q16322 511 aa7.22□□□□□ -1.25
SRGAP3-213ENST00000618999 C11orf91Q3C1V1 193 aa7.22□□□□□ -1.25
SRGAP3-213ENST00000618999 ACSBG2Q5FVE4 666 aa7.22□□□□□ -1.25
SRGAP3-213ENST00000618999 SYCP2LQ5T4T6 812 aa7.22□□□□□ -1.25
SRGAP3-213ENST00000618999 ARMCX6Q7L4S7 300 aa7.22□□□□□ -1.25
SRGAP3-213ENST00000618999 ARHGAP22Q7Z5H3 698 aa7.22□□□□□ -1.25
SRGAP3-213ENST00000618999 PRPF39Q86UA1 669 aaKnown RBP7.22□□□□□ -1.25
SRGAP3-213ENST00000618999 EGFL6Q8IUX8 553 aa7.22□□□□□ -1.25
SRGAP3-213ENST00000618999 TMEM192Q8IY95 271 aa7.22□□□□□ -1.25
SRGAP3-213ENST00000618999 RNF217Q8TC41 542 aa7.22□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms