RNA–Protein interactions for RNA: ENST00000618902.1

SHMT1-211, Transcript of serine hydroxymethyltransferase 1, humanhuman

TSL 5 BASIC

Gene SHMT1, Length 378 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT1-211ENST00000618902 LRRC53A6NM62 1247 aa5.49□□□□□ -1.53
SHMT1-211ENST00000618902 YJEFN3A6XGL0 299 aa5.49□□□□□ -1.53
SHMT1-211ENST00000618902 EIF3CLB5ME19 914 aaKnown RBP5.49□□□□□ -1.53
SHMT1-211ENST00000618902 E5RJQ4 531 aa5.49□□□□□ -1.53
SHMT1-211ENST00000618902 E7ENQ6 273 aa5.49□□□□□ -1.53
SHMT1-211ENST00000618902 ARNTLO00327 626 aa5.49□□□□□ -1.53
SHMT1-211ENST00000618902 SCAMP3O14828 347 aaKnown RBP5.49□□□□□ -1.53
SHMT1-211ENST00000618902 SART1O43290 800 aaKnown RBP5.49□□□□□ -1.53
SHMT1-211ENST00000618902 COCHO43405 550 aa5.49□□□□□ -1.53
SHMT1-211ENST00000618902 GREM1O60565 184 aa5.49□□□□□ -1.53
SHMT1-211ENST00000618902 OLFM2O95897 454 aa5.49□□□□□ -1.53
SHMT1-211ENST00000618902 OAS1P00973 400 aaKnown RBP5.49□□□□□ -1.53
SHMT1-211ENST00000618902 ERBB2P04626 1255 aa5.49□□□□□ -1.53
SHMT1-211ENST00000618902 CYP1A1P04798 512 aaPredicted RBP5.49□□□□□ -1.53
SHMT1-211ENST00000618902 PLEKP08567 350 aaPredicted RBP5.49□□□□□ -1.53
SHMT1-211ENST00000618902 SETSIPP0DME0 302 aa5.49□□□□□ -1.53
SHMT1-211ENST00000618902 LCP1P13796 627 aa5.49□□□□□ -1.53
SHMT1-211ENST00000618902 DRD1P21728 446 aa5.49□□□□□ -1.53
SHMT1-211ENST00000618902 HNRNPH3P31942 346 aaKnown RBP5.49□□□□□ -1.53
SHMT1-211ENST00000618902 CASP14P31944 242 aa5.49□□□□□ -1.53
SHMT1-211ENST00000618902 KRT9P35527 623 aa5.49□□□□□ -1.53
SHMT1-211ENST00000618902 NBL1P41271 181 aa5.49□□□□□ -1.53
SHMT1-211ENST00000618902 STAT1P42224 750 aa5.49□□□□□ -1.53
SHMT1-211ENST00000618902 TKTL1P51854 596 aa5.49□□□□□ -1.53
SHMT1-211ENST00000618902 KPNA1P52294 538 aaPredicted RBP5.49□□□□□ -1.53
SHMT1-211ENST00000618902 ADKP55263 362 aaKnown RBP5.49□□□□□ -1.53
SHMT1-211ENST00000618902 SNX16P57768 344 aa5.49□□□□□ -1.53
SHMT1-211ENST00000618902 DAOAP59103 153 aa5.49□□□□□ -1.53
SHMT1-211ENST00000618902 NOMO3P69849 1222 aa5.49□□□□□ -1.53
SHMT1-211ENST00000618902 GPC5P78333 572 aa5.49□□□□□ -1.53
SHMT1-211ENST00000618902 PITX1P78337 314 aaPredicted RBP5.49□□□□□ -1.53
SHMT1-211ENST00000618902 SLC7A9P82251 487 aa5.49□□□□□ -1.53
SHMT1-211ENST00000618902 ZBED6P86452 979 aa5.49□□□□□ -1.53
SHMT1-211ENST00000618902 CDR2Q01850 454 aa5.49□□□□□ -1.53
SHMT1-211ENST00000618902 ARID5AQ03989 594 aa5.49□□□□□ -1.53
SHMT1-211ENST00000618902 PTK2Q05397 1052 aa5.49□□□□□ -1.53
SHMT1-211ENST00000618902 PTP4A2Q12974 167 aa5.49□□□□□ -1.53
SHMT1-211ENST00000618902 SPA17Q15506 151 aa5.49□□□□□ -1.53
SHMT1-211ENST00000618902 TAF5Q15542 800 aa5.49□□□□□ -1.53
SHMT1-211ENST00000618902 ITPRIPL2Q3MIP1 535 aa5.49□□□□□ -1.53
SHMT1-211ENST00000618902 GLE1Q53GS7 698 aaKnown RBP5.49□□□□□ -1.53
SHMT1-211ENST00000618902 ACBD5Q5T8D3 534 aaPredicted RBP5.49□□□□□ -1.53
SHMT1-211ENST00000618902 PAPD7Q5XG87 772 aaKnown RBP5.49□□□□□ -1.53
SHMT1-211ENST00000618902 PM20D1Q6GTS8 502 aa5.49□□□□□ -1.53
SHMT1-211ENST00000618902 WDR59Q6PJI9 974 aa5.49□□□□□ -1.53
SHMT1-211ENST00000618902 ZNF571Q7Z3V5 609 aaPredicted RBP5.49□□□□□ -1.53
SHMT1-211ENST00000618902 TMEM110Q86TL2 294 aa5.49□□□□□ -1.53
SHMT1-211ENST00000618902 RNF10Q8N5U6 811 aaKnown RBP5.49□□□□□ -1.53
SHMT1-211ENST00000618902 ZNF557Q8N988 423 aaPredicted RBP5.49□□□□□ -1.53
SHMT1-211ENST00000618902 CPLX3Q8WVH0 158 aa5.49□□□□□ -1.53
SHMT1-211ENST00000618902 KCTD13Q8WZ19 329 aa5.49□□□□□ -1.53
SHMT1-211ENST00000618902 TSC1Q92574 1164 aa5.49□□□□□ -1.53
SHMT1-211ENST00000618902 SYN2Q92777 582 aaPredicted RBP5.49□□□□□ -1.53
SHMT1-211ENST00000618902 USP13Q92995 863 aaPredicted RBP5.49□□□□□ -1.53
SHMT1-211ENST00000618902 FBXO32Q969P5 355 aa5.49□□□□□ -1.53
SHMT1-211ENST00000618902 P2RY11Q96G91 374 aa5.49□□□□□ -1.53
SHMT1-211ENST00000618902 CALR3Q96L12 384 aaKnown RBP5.49□□□□□ -1.53
SHMT1-211ENST00000618902 HSFY1Q96LI6 401 aa5.49□□□□□ -1.53
SHMT1-211ENST00000618902 EIF3CQ99613 913 aaKnown RBP5.49□□□□□ -1.53
SHMT1-211ENST00000618902 ADAM33Q9BZ11 813 aa5.49□□□□□ -1.53
SHMT1-211ENST00000618902 FAM107BQ9H098 131 aa5.49□□□□□ -1.53
SHMT1-211ENST00000618902 LHX5Q9H2C1 402 aa5.49□□□□□ -1.53
SHMT1-211ENST00000618902 CYLDQ9NQC7 956 aa5.49□□□□□ -1.53
SHMT1-211ENST00000618902 TLR8Q9NR97 1041 aaKnown RBP5.49□□□□□ -1.53
SHMT1-211ENST00000618902 ABHD10Q9NUJ1 306 aa5.49□□□□□ -1.53
SHMT1-211ENST00000618902 MTPAPQ9NVV4 582 aaKnown RBP eCLIP5.49□□□□□ -1.53
SHMT1-211ENST00000618902 TAS2R14Q9NYV8 317 aa5.49□□□□□ -1.53
SHMT1-211ENST00000618902 CLIC5Q9NZA1 410 aa5.49□□□□□ -1.53
SHMT1-211ENST00000618902 AIPL1Q9NZN9 384 aa5.49□□□□□ -1.53
SHMT1-211ENST00000618902 HESX1Q9UBX0 185 aa5.49□□□□□ -1.53
SHMT1-211ENST00000618902 MYO6Q9UM54 1294 aa5.49□□□□□ -1.53
SHMT1-211ENST00000618902 PCDHGA2Q9Y5H1 932 aa5.49□□□□□ -1.53
SHMT1-211ENST00000618902 GPR179Q6PRD1 2367 aa5.48□□□□□ -1.53
SHMT1-211ENST00000618902 NUP210Q8TEM1 1887 aaPredicted RBP5.48□□□□□ -1.53
SHMT1-211ENST00000618902 KIF26AQ9ULI4 1882 aaPredicted RBP5.48□□□□□ -1.53
SHMT1-211ENST00000618902 MYO16Q9Y6X6 1858 aa5.48□□□□□ -1.53
SHMT1-211ENST00000618902 E2F8A0AVK6 867 aa5.48□□□□□ -1.53
SHMT1-211ENST00000618902 HEPACAM2A8MVW5 462 aa5.48□□□□□ -1.53
SHMT1-211ENST00000618902 PALM2-AKAP2B1ALY0 433 aaPredicted RBP5.48□□□□□ -1.53
SHMT1-211ENST00000618902 DDX3XO00571 662 aaKnown RBP eCLIP5.48□□□□□ -1.53
SHMT1-211ENST00000618902 NPC1O15118 1278 aa5.48□□□□□ -1.53
SHMT1-211ENST00000618902 NDUFA10O95299 355 aa5.48□□□□□ -1.53
SHMT1-211ENST00000618902 GJB6O95452 261 aa5.48□□□□□ -1.53
SHMT1-211ENST00000618902 NFATC1O95644 943 aa5.48□□□□□ -1.53
SHMT1-211ENST00000618902 ZBED1O96006 694 aa5.48□□□□□ -1.53
SHMT1-211ENST00000618902 UNGP13051 313 aaPredicted RBP5.48□□□□□ -1.53
SHMT1-211ENST00000618902 FERP16591 822 aa5.48□□□□□ -1.53
SHMT1-211ENST00000618902 HDCP19113 662 aa5.48□□□□□ -1.53
SHMT1-211ENST00000618902 SDHBP21912 280 aa5.48□□□□□ -1.53
SHMT1-211ENST00000618902 PRKCIP41743 596 aa5.48□□□□□ -1.53
SHMT1-211ENST00000618902 CCR3P51677 355 aa5.48□□□□□ -1.53
SHMT1-211ENST00000618902 BPIFB4P59827 614 aa5.48□□□□□ -1.53
SHMT1-211ENST00000618902 GRSF1Q12849 480 aaKnown RBP eCLIP5.48□□□□□ -1.53
SHMT1-211ENST00000618902 USP4Q13107 963 aa5.48□□□□□ -1.53
SHMT1-211ENST00000618902 GRM2Q14416 872 aa5.48□□□□□ -1.53
SHMT1-211ENST00000618902 ZNF77Q15935 545 aa5.48□□□□□ -1.53
SHMT1-211ENST00000618902 ASIC2Q16515 512 aa5.48□□□□□ -1.53
SHMT1-211ENST00000618902 CLEC16AQ2KHT3 1053 aa5.48□□□□□ -1.53
SHMT1-211ENST00000618902 ZNF569Q5MCW4 686 aa5.48□□□□□ -1.53
SHMT1-211ENST00000618902 C10orf76Q5T2E6 689 aa5.48□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms