RNA–Protein interactions for RNA: ENST00000618836.4

UBE2D3-233, Transcript of ubiquitin conjugating enzyme E2 D3, human

APPRIS ALT1 TSL 5 BASIC

Gene UBE2D3, Length 3,472 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBE2D3-233	ENST00000618836		Q8NFD4	153 aa		4.24	□□□□□ -1.73
UBE2D3-233	ENST00000618836	COG1	Q8WTW3	980 aa		4.24	□□□□□ -1.73
UBE2D3-233	ENST00000618836	TOX2	Q96NM4	488 aa		4.24	□□□□□ -1.73
UBE2D3-233	ENST00000618836	CLUHP3	Q96NS8	147 aa		4.24	□□□□□ -1.73
UBE2D3-233	ENST00000618836	FCRL4	Q96PJ5	515 aa		4.24	□□□□□ -1.73
UBE2D3-233	ENST00000618836	TAAR9	Q96RI9	348 aa		4.24	□□□□□ -1.73
UBE2D3-233	ENST00000618836	NUP88	Q99567	741 aa	Predicted RBP	4.24	□□□□□ -1.73
UBE2D3-233	ENST00000618836	SH3GL2	Q99962	352 aa		4.24	□□□□□ -1.73
UBE2D3-233	ENST00000618836	WAC	Q9BTA9	647 aa		4.24	□□□□□ -1.73
UBE2D3-233	ENST00000618836	MLPH	Q9BV36	600 aa	Predicted RBP	4.24	□□□□□ -1.73
UBE2D3-233	ENST00000618836	FRMD8P1	Q9BZ68	369 aa	Predicted RBP	4.24	□□□□□ -1.73
UBE2D3-233	ENST00000618836	SENP6	Q9GZR1	1112 aa	Predicted RBP	4.24	□□□□□ -1.73
UBE2D3-233	ENST00000618836	WDR26	Q9H7D7	661 aa		4.24	□□□□□ -1.73
UBE2D3-233	ENST00000618836	ATP13A3	Q9H7F0	1226 aa		4.24	□□□□□ -1.73
UBE2D3-233	ENST00000618836	MID1IP1	Q9NPA3	183 aa		4.24	□□□□□ -1.73
UBE2D3-233	ENST00000618836	PIH1D3	Q9NQM4	214 aa	Known RBP	4.24	□□□□□ -1.73
UBE2D3-233	ENST00000618836	UXT	Q9UBK9	157 aa	Predicted RBP	4.24	□□□□□ -1.73
UBE2D3-233	ENST00000618836	SLC8A2	Q9UPR5	921 aa		4.24	□□□□□ -1.73
UBE2D3-233	ENST00000618836	STARD13	Q9Y3M8	1113 aa		4.24	□□□□□ -1.73
UBE2D3-233	ENST00000618836	STON1	Q9Y6Q2	735 aa		4.24	□□□□□ -1.73
UBE2D3-233	ENST00000618836	CASP8AP2	Q9UKL3	1982 aa		4.24	□□□□□ -1.73
UBE2D3-233	ENST00000618836	UTRN	P46939	3433 aa		4.24	□□□□□ -1.73
UBE2D3-233	ENST00000618836	CAPN8	A6NHC0	703 aa		4.23	□□□□□ -1.73
UBE2D3-233	ENST00000618836	SRRM3	A6NNA2	597 aa	Predicted RBP	4.23	□□□□□ -1.73
UBE2D3-233	ENST00000618836	AHRR	A9YTQ3	701 aa		4.23	□□□□□ -1.73
UBE2D3-233	ENST00000618836	SNPH	O15079	494 aa		4.23	□□□□□ -1.73
UBE2D3-233	ENST00000618836	HCRTR2	O43614	444 aa		4.23	□□□□□ -1.73
UBE2D3-233	ENST00000618836	KRT86	O43790	486 aa		4.23	□□□□□ -1.73
UBE2D3-233	ENST00000618836	ARHGEF15	O94989	841 aa		4.23	□□□□□ -1.73
UBE2D3-233	ENST00000618836	CCNA2	P20248	432 aa		4.23	□□□□□ -1.73
UBE2D3-233	ENST00000618836	ALDH1A3	P47895	512 aa		4.23	□□□□□ -1.73
UBE2D3-233	ENST00000618836	P2RX3	P56373	397 aa		4.23	□□□□□ -1.73
UBE2D3-233	ENST00000618836	EML3	Q32P44	896 aa		4.23	□□□□□ -1.73
UBE2D3-233	ENST00000618836	THEM4	Q5T1C6	240 aa		4.23	□□□□□ -1.73
UBE2D3-233	ENST00000618836	DENND2C	Q68D51	928 aa		4.23	□□□□□ -1.73
UBE2D3-233	ENST00000618836	KIAA1841	Q6NSI8	718 aa		4.23	□□□□□ -1.73
UBE2D3-233	ENST00000618836	ZBTB33	Q86T24	672 aa		4.23	□□□□□ -1.73
UBE2D3-233	ENST00000618836	ADCK1	Q86TW2	530 aa		4.23	□□□□□ -1.73
UBE2D3-233	ENST00000618836	CDH24	Q86UP0	819 aa		4.23	□□□□□ -1.73
UBE2D3-233	ENST00000618836	ETFBKMT	Q8IXQ9	262 aa		4.23	□□□□□ -1.73
UBE2D3-233	ENST00000618836	PYROXD2	Q8N2H3	581 aa		4.23	□□□□□ -1.73
UBE2D3-233	ENST00000618836	FBXW8	Q8N3Y1	598 aa		4.23	□□□□□ -1.73
UBE2D3-233	ENST00000618836	C3orf58	Q8NDZ4	430 aa		4.23	□□□□□ -1.73
UBE2D3-233	ENST00000618836	SLC24A4	Q8NFF2	622 aa		4.23	□□□□□ -1.73
UBE2D3-233	ENST00000618836	UCMA	Q8WVF2	138 aa		4.23	□□□□□ -1.73
UBE2D3-233	ENST00000618836	TNFRSF25	Q93038	417 aa		4.23	□□□□□ -1.73
UBE2D3-233	ENST00000618836	C7orf26	Q96N11	449 aa		4.23	□□□□□ -1.73
UBE2D3-233	ENST00000618836	SARS2	Q9NP81	518 aa	Known RBP	4.23	□□□□□ -1.73
UBE2D3-233	ENST00000618836	WWOX	Q9NZC7	414 aa		4.23	□□□□□ -1.73
UBE2D3-233	ENST00000618836	CACNG4	Q9UBN1	327 aa		4.23	□□□□□ -1.73
UBE2D3-233	ENST00000618836	DLGAP4	Q9Y2H0	992 aa		4.23	□□□□□ -1.73
UBE2D3-233	ENST00000618836	CYP46A1	Q9Y6A2	500 aa		4.23	□□□□□ -1.73
UBE2D3-233	ENST00000618836	ROBO2	Q9HCK4	1378 aa		4.23	□□□□□ -1.73
UBE2D3-233	ENST00000618836	PLXNA3	P51805	1871 aa		4.23	□□□□□ -1.73
UBE2D3-233	ENST00000618836	GLTPD2	A6NH11	291 aa		4.23	□□□□□ -1.73
UBE2D3-233	ENST00000618836	FOXO6	A8MYZ6	492 aa		4.23	□□□□□ -1.73
UBE2D3-233	ENST00000618836	FAM47E-STBD1	D6RA91	191 aa		4.23	□□□□□ -1.73
UBE2D3-233	ENST00000618836	T	O15178	435 aa		4.23	□□□□□ -1.73
UBE2D3-233	ENST00000618836	RRP8	O43159	456 aa	Known RBP	4.23	□□□□□ -1.73
UBE2D3-233	ENST00000618836	BUB1	O43683	1085 aa		4.23	□□□□□ -1.73
UBE2D3-233	ENST00000618836	ECE2	O60344	883 aa		4.23	□□□□□ -1.73
UBE2D3-233	ENST00000618836	PLA2G6	O60733	806 aa		4.23	□□□□□ -1.73
UBE2D3-233	ENST00000618836	PTCD1	O75127	700 aa	Known RBP	4.23	□□□□□ -1.73
UBE2D3-233	ENST00000618836	CIAO1	O76071	339 aa		4.23	□□□□□ -1.73
UBE2D3-233	ENST00000618836	PIGN	O95427	931 aa		4.23	□□□□□ -1.73
UBE2D3-233	ENST00000618836	LCA5L	O95447	670 aa		4.23	□□□□□ -1.73
UBE2D3-233	ENST00000618836	TMIGD3	P0DMS9	266 aa	Predicted RBP	4.23	□□□□□ -1.73
UBE2D3-233	ENST00000618836	CHN1	P15882	459 aa		4.23	□□□□□ -1.73
UBE2D3-233	ENST00000618836	ADSL	P30566	484 aa	Predicted RBP	4.23	□□□□□ -1.73
UBE2D3-233	ENST00000618836	GMFB	P60983	142 aa		4.23	□□□□□ -1.73
UBE2D3-233	ENST00000618836	OCRL	Q01968	901 aa		4.23	□□□□□ -1.73
UBE2D3-233	ENST00000618836	PPARA	Q07869	468 aa		4.23	□□□□□ -1.73
UBE2D3-233	ENST00000618836	GOLGA8F	Q08AF8	430 aa		4.23	□□□□□ -1.73
UBE2D3-233	ENST00000618836	GOLGA8DP	Q0D2H9	430 aa		4.23	□□□□□ -1.73
UBE2D3-233	ENST00000618836	MAP4K2	Q12851	820 aa		4.23	□□□□□ -1.73
UBE2D3-233	ENST00000618836	COASY	Q13057	564 aa		4.23	□□□□□ -1.73
UBE2D3-233	ENST00000618836	ORC1	Q13415	861 aa		4.23	□□□□□ -1.73
UBE2D3-233	ENST00000618836	NCAPH	Q15003	741 aa		4.23	□□□□□ -1.73
UBE2D3-233	ENST00000618836	IFIT1B	Q5T764	474 aa	Known RBP	4.23	□□□□□ -1.73
UBE2D3-233	ENST00000618836	DAB2IP	Q5VWQ8	1189 aa		4.23	□□□□□ -1.73
UBE2D3-233	ENST00000618836	ZCCHC12	Q6PEW1	402 aa		4.23	□□□□□ -1.73
UBE2D3-233	ENST00000618836	RFPL4B	Q6ZWI9	263 aa		4.23	□□□□□ -1.73
UBE2D3-233	ENST00000618836	HDX	Q7Z353	690 aa		4.23	□□□□□ -1.73
UBE2D3-233	ENST00000618836	STX12	Q86Y82	276 aa		4.23	□□□□□ -1.73
UBE2D3-233	ENST00000618836	CLVS1	Q8IUQ0	354 aa	Predicted RBP	4.23	□□□□□ -1.73
UBE2D3-233	ENST00000618836	CCDC50	Q8IVM0	306 aa		4.23	□□□□□ -1.73
UBE2D3-233	ENST00000618836	CCDC36	Q8IYA8	594 aa		4.23	□□□□□ -1.73
UBE2D3-233	ENST00000618836	CCDC63	Q8NA47	563 aa		4.23	□□□□□ -1.73
UBE2D3-233	ENST00000618836	DYDC1	Q8WWB3	177 aa		4.23	□□□□□ -1.73
UBE2D3-233	ENST00000618836	TRIM63	Q969Q1	353 aa		4.23	□□□□□ -1.73
UBE2D3-233	ENST00000618836	ANAPC16	Q96DE5	110 aa		4.23	□□□□□ -1.73
UBE2D3-233	ENST00000618836	CEP170P1	Q96L14	293 aa		4.23	□□□□□ -1.73
UBE2D3-233	ENST00000618836	FAM111A	Q96PZ2	611 aa		4.23	□□□□□ -1.73
UBE2D3-233	ENST00000618836	DCLK3	Q9C098	648 aa		4.23	□□□□□ -1.73
UBE2D3-233	ENST00000618836	JMJD4	Q9H9V9	463 aa		4.23	□□□□□ -1.73
UBE2D3-233	ENST00000618836	NRBP2	Q9NSY0	501 aa		4.23	□□□□□ -1.73
UBE2D3-233	ENST00000618836	INTS7	Q9NVH2	962 aa	Known RBP	4.23	□□□□□ -1.73
UBE2D3-233	ENST00000618836	ARMC1	Q9NVT9	282 aa		4.23	□□□□□ -1.73
UBE2D3-233	ENST00000618836	ABI2	Q9NYB9	513 aa	Predicted RBP	4.23	□□□□□ -1.73
UBE2D3-233	ENST00000618836	ZSWIM5	Q9P217	1185 aa		4.23	□□□□□ -1.73

Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms