RNA–Protein interactions for RNA: ENST00000618450.1

CHD7-212, Transcript of chromodomain helicase DNA binding protein 7, humanhuman

Gene CHD7, Length 4,222 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7-212ENST00000618450 CNDP1Q96KN2 507 aa8.2□□□□□ -1.1
CHD7-212ENST00000618450 OXCT2Q9BYC2 517 aaPredicted RBP8.2□□□□□ -1.1
CHD7-212ENST00000618450 MAP3K7O43318 606 aa8.2□□□□□ -1.1
CHD7-212ENST00000618450 HMGCRP04035 888 aa8.2□□□□□ -1.1
CHD7-212ENST00000618450 TGM2P21980 687 aa8.2□□□□□ -1.1
CHD7-212ENST00000618450 PEX2P28328 305 aa8.2□□□□□ -1.1
CHD7-212ENST00000618450 ROR1Q01973 937 aa8.2□□□□□ -1.1
CHD7-212ENST00000618450 FRG1Q14331 258 aaKnown RBP8.2□□□□□ -1.1
CHD7-212ENST00000618450 C15orf59Q2T9L4 293 aaPredicted RBP8.2□□□□□ -1.1
CHD7-212ENST00000618450 LPCAT4Q643R3 524 aa8.2□□□□□ -1.1
CHD7-212ENST00000618450 ZCCHC23Q6ZST2 131 aa8.2□□□□□ -1.1
CHD7-212ENST00000618450 PRPF31Q8WWY3 499 aaKnown RBP8.2□□□□□ -1.1
CHD7-212ENST00000618450 FAM161BQ96MY7 647 aa8.2□□□□□ -1.1
CHD7-212ENST00000618450 NFKBIZQ9BYH8 718 aa8.2□□□□□ -1.1
CHD7-212ENST00000618450 ZCWPW1Q9H0M4 648 aa8.2□□□□□ -1.1
CHD7-212ENST00000618450 R3HDMLQ9H3Y0 253 aa8.2□□□□□ -1.1
CHD7-212ENST00000618450 DNAJC5Q9H3Z4 198 aa8.2□□□□□ -1.1
CHD7-212ENST00000618450 SMYD3Q9H7B4 428 aa8.2□□□□□ -1.1
CHD7-212ENST00000618450 GJD2Q9UKL4 321 aa8.2□□□□□ -1.1
CHD7-212ENST00000618450 SCAF8Q9UPN6 1271 aaKnown RBP8.2□□□□□ -1.1
CHD7-212ENST00000618450 OR6B1O95007 311 aa8.19□□□□□ -1.1
CHD7-212ENST00000618450 UBTFL6P0CB48 400 aaPredicted RBP8.19□□□□□ -1.1
CHD7-212ENST00000618450 VAV1P15498 845 aa8.19□□□□□ -1.1
CHD7-212ENST00000618450 GMPRP36959 345 aa8.19□□□□□ -1.1
CHD7-212ENST00000618450 PSMD8P48556 350 aa8.19□□□□□ -1.1
CHD7-212ENST00000618450 DPYSL2Q16555 572 aa8.19□□□□□ -1.1
CHD7-212ENST00000618450 LIMS2Q7Z4I7 341 aa8.19□□□□□ -1.1
CHD7-212ENST00000618450 TMEM110Q86TL2 294 aa8.19□□□□□ -1.1
CHD7-212ENST00000618450 ACMSDQ8TDX5 336 aa8.19□□□□□ -1.1
CHD7-212ENST00000618450 KBTBD7Q8WVZ9 684 aa8.19□□□□□ -1.1
CHD7-212ENST00000618450 IRGQQ8WZA9 623 aa8.19□□□□□ -1.1
CHD7-212ENST00000618450 WWP1Q9H0M0 922 aa8.19□□□□□ -1.1
CHD7-212ENST00000618450 VPS33BQ9H267 617 aa8.19□□□□□ -1.1
CHD7-212ENST00000618450 IFT122Q9HBG6 1241 aa8.19□□□□□ -1.1
CHD7-212ENST00000618450 IL1RAPL1Q9NZN1 696 aa8.19□□□□□ -1.1
CHD7-212ENST00000618450 PAK5Q9P286 719 aa8.19□□□□□ -1.1
CHD7-212ENST00000618450 PATJQ8NI35 1801 aa8.19□□□□□ -1.1
CHD7-212ENST00000618450 TRIM64A6NGJ6 449 aa8.19□□□□□ -1.1
CHD7-212ENST00000618450 MEI4A8MW99 385 aa8.19□□□□□ -1.1
CHD7-212ENST00000618450 COPEO14579 308 aa8.19□□□□□ -1.1
CHD7-212ENST00000618450 DKC1O60832 514 aaKnown RBP eCLIP8.19□□□□□ -1.1
CHD7-212ENST00000618450 ZCCHC18P0CG32 403 aa8.19□□□□□ -1.1
CHD7-212ENST00000618450 PRDX6P30041 224 aa8.19□□□□□ -1.1
CHD7-212ENST00000618450 BACE1P56817 501 aa8.19□□□□□ -1.1
CHD7-212ENST00000618450 DUOXA2Q1HG44 320 aa8.19□□□□□ -1.1
CHD7-212ENST00000618450 FAM47CQ5HY64 1035 aa8.19□□□□□ -1.1
CHD7-212ENST00000618450 SYCP2LQ5T4T6 812 aa8.19□□□□□ -1.1
CHD7-212ENST00000618450 DCUN1D2Q6PH85 259 aa8.19□□□□□ -1.1
CHD7-212ENST00000618450 LCLAT1Q6UWP7 414 aa8.19□□□□□ -1.1
CHD7-212ENST00000618450 RFX8Q6ZV50 586 aa8.19□□□□□ -1.1
CHD7-212ENST00000618450 FAM183BPQ6ZVS7 135 aa8.19□□□□□ -1.1
CHD7-212ENST00000618450 TMEM126BQ8IUX1 230 aa8.19□□□□□ -1.1
CHD7-212ENST00000618450 SLC25A41Q8N5S1 370 aa8.19□□□□□ -1.1
CHD7-212ENST00000618450 GSDMBQ8TAX9 411 aa8.19□□□□□ -1.1
CHD7-212ENST00000618450 NAT14Q8WUY8 206 aa8.19□□□□□ -1.1
CHD7-212ENST00000618450 AFG1LQ8WV93 481 aa8.19□□□□□ -1.1
CHD7-212ENST00000618450 BTBD9Q96Q07 612 aa8.19□□□□□ -1.1
CHD7-212ENST00000618450 THTPAQ9BU02 230 aa8.19□□□□□ -1.1
CHD7-212ENST00000618450 SLC4A5Q9BY07 1137 aa8.19□□□□□ -1.1
CHD7-212ENST00000618450 CXCL16Q9H2A7 254 aa8.19□□□□□ -1.1
CHD7-212ENST00000618450 XAB2Q9HCS7 855 aaKnown RBP8.19□□□□□ -1.1
CHD7-212ENST00000618450 COMMD3-BMI1R4GMX3 469 aa8.19□□□□□ -1.1
CHD7-212ENST00000618450 UNCXA6NJT0 531 aa8.19□□□□□ -1.1
CHD7-212ENST00000618450 H0YIN7 160 aa8.19□□□□□ -1.1
CHD7-212ENST00000618450 ACOT8O14734 319 aa8.19□□□□□ -1.1
CHD7-212ENST00000618450 UBA1P22314 1058 aaKnown RBP8.19□□□□□ -1.1
CHD7-212ENST00000618450 PSMC1P62191 440 aaKnown RBP8.19□□□□□ -1.1
CHD7-212ENST00000618450 BASP1P80723 227 aaKnown RBP8.19□□□□□ -1.1
CHD7-212ENST00000618450 MYBPC1Q00872 1141 aa8.19□□□□□ -1.1
CHD7-212ENST00000618450 MBTD1Q05BQ5 628 aa8.19□□□□□ -1.1
CHD7-212ENST00000618450 HMGCLL1Q8TB92 370 aa8.19□□□□□ -1.1
CHD7-212ENST00000618450 LRRN4Q8WUT4 740 aa8.19□□□□□ -1.1
CHD7-212ENST00000618450 SLC35F5Q8WV83 523 aa8.19□□□□□ -1.1
CHD7-212ENST00000618450 PYDC1Q8WXC3 89 aa8.19□□□□□ -1.1
CHD7-212ENST00000618450 RSAD2Q8WXG1 361 aa8.19□□□□□ -1.1
CHD7-212ENST00000618450 EZH1Q92800 747 aaPredicted RBP8.19□□□□□ -1.1
CHD7-212ENST00000618450 CNPY3Q9BT09 278 aa8.19□□□□□ -1.1
CHD7-212ENST00000618450 C1QTNF1Q9BXJ1 281 aa8.19□□□□□ -1.1
CHD7-212ENST00000618450 VCXQ9H320 206 aa8.19□□□□□ -1.1
CHD7-212ENST00000618450 ZNF302Q9NR11 478 aa8.19□□□□□ -1.1
CHD7-212ENST00000618450 STAU2Q9NUL3 570 aaKnown RBP eCLIP8.19□□□□□ -1.1
CHD7-212ENST00000618450 A6NJR5 290 aa8.18□□□□□ -1.1
CHD7-212ENST00000618450 B4GALT5O43286 388 aa8.18□□□□□ -1.1
CHD7-212ENST00000618450 RAD17O75943 681 aa8.18□□□□□ -1.1
CHD7-212ENST00000618450 PTPN11Q06124 597 aaPredicted RBP8.18□□□□□ -1.1
CHD7-212ENST00000618450 KDSRQ06136 332 aa8.18□□□□□ -1.1
CHD7-212ENST00000618450 ZNF423Q2M1K9 1284 aa8.18□□□□□ -1.1
CHD7-212ENST00000618450 C8orf82Q6P1X6 216 aaPredicted RBP8.18□□□□□ -1.1
CHD7-212ENST00000618450 CPSF7Q8N684 471 aaKnown RBP8.18□□□□□ -1.1
CHD7-212ENST00000618450 PDCD7Q8N8D1 485 aaKnown RBP8.18□□□□□ -1.1
CHD7-212ENST00000618450 KCTD6Q8NC69 237 aa8.18□□□□□ -1.1
CHD7-212ENST00000618450 SMC1BQ8NDV3 1235 aa8.18□□□□□ -1.1
CHD7-212ENST00000618450 QKIQ96PU8 341 aaKnown RBP eCLIP8.18□□□□□ -1.1
CHD7-212ENST00000618450 ZNF670Q9BS34 389 aa8.18□□□□□ -1.1
CHD7-212ENST00000618450 FAM124BQ9H5Z6 455 aaPredicted RBP8.18□□□□□ -1.1
CHD7-212ENST00000618450 RAB6BQ9NRW1 208 aa8.18□□□□□ -1.1
CHD7-212ENST00000618450 ZC3H7BQ9UGR2 993 aaKnown RBP8.18□□□□□ -1.1
CHD7-212ENST00000618450 ANGPTL2Q9UKU9 493 aa8.18□□□□□ -1.1
CHD7-212ENST00000618450 PRSS51A0A1B0GVH4 220 aa8.18□□□□□ -1.1
CHD7-212ENST00000618450 AP2B1P63010 937 aa8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms