RNA–Protein interactions for RNA: ENST00000618395.4

COL5A1-208, Transcript of collagen type V alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL5A1, Length 8,437 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-208ENST00000618395 ARMCX1Q9P291 453 aa15.4■□□□□ 0.06
COL5A1-208ENST00000618395 VPS9D1Q9Y2B5 631 aa15.4■□□□□ 0.06
COL5A1-208ENST00000618395 KDM5BQ9UGL1 1544 aa15.4■□□□□ 0.06
COL5A1-208ENST00000618395 M0QYV0 167 aa15.4■□□□□ 0.06
COL5A1-208ENST00000618395 GSTM5P46439 218 aa15.4■□□□□ 0.06
COL5A1-208ENST00000618395 KCNJ1P48048 391 aa15.4■□□□□ 0.06
COL5A1-208ENST00000618395 APEX2Q9UBZ4 518 aa15.4■□□□□ 0.06
COL5A1-208ENST00000618395 MRPS7Q9Y2R9 242 aaKnown RBP15.4■□□□□ 0.06
COL5A1-208ENST00000618395 CCNT2O60583 730 aaKnown RBP15.39■□□□□ 0.05
COL5A1-208ENST00000618395 PRKD3O94806 890 aa15.39■□□□□ 0.05
COL5A1-208ENST00000618395 SUPT7LO94864 414 aa15.39■□□□□ 0.05
COL5A1-208ENST00000618395 ZNF432O94892 652 aa15.39■□□□□ 0.05
COL5A1-208ENST00000618395 PRKACAP17612 351 aa15.39■□□□□ 0.05
COL5A1-208ENST00000618395 RPA1P27694 616 aa15.39■□□□□ 0.05
COL5A1-208ENST00000618395 TPI1P60174 286 aa15.39■□□□□ 0.05
COL5A1-208ENST00000618395 PTSQ03393 145 aa15.39■□□□□ 0.05
COL5A1-208ENST00000618395 LINC00523Q86TU6 105 aa15.39■□□□□ 0.05
COL5A1-208ENST00000618395 ZNF540Q8NDQ6 660 aa15.39■□□□□ 0.05
COL5A1-208ENST00000618395 ACTRT1Q8TDG2 376 aa15.39■□□□□ 0.05
COL5A1-208ENST00000618395 RAD54LQ92698 747 aa15.39■□□□□ 0.05
COL5A1-208ENST00000618395 C18orf8Q96DM3 657 aa15.39■□□□□ 0.05
COL5A1-208ENST00000618395 TPD52L3Q96J77 140 aa15.39■□□□□ 0.05
COL5A1-208ENST00000618395 KATNAL1Q9BW62 490 aa15.39■□□□□ 0.05
COL5A1-208ENST00000618395 CDH19Q9H159 772 aa15.39■□□□□ 0.05
COL5A1-208ENST00000618395 NDUFB5O43674 189 aa15.39■□□□□ 0.05
COL5A1-208ENST00000618395 SNX4O95219 450 aa15.39■□□□□ 0.05
COL5A1-208ENST00000618395 IFNGR2P38484 337 aa15.39■□□□□ 0.05
COL5A1-208ENST00000618395 PHKG1Q16816 387 aa15.39■□□□□ 0.05
COL5A1-208ENST00000618395 C10orf53Q8N6V4 93 aa15.39■□□□□ 0.05
COL5A1-208ENST00000618395 S100A13Q99584 98 aa15.39■□□□□ 0.05
COL5A1-208ENST00000618395 LIMD1Q9UGP4 676 aa15.39■□□□□ 0.05
COL5A1-208ENST00000618395 CLDN25C9JDP6 229 aa15.39■□□□□ 0.05
COL5A1-208ENST00000618395 MAGEA12P43365 314 aa15.39■□□□□ 0.05
COL5A1-208ENST00000618395 CYP2R1Q6VVX0 501 aa15.39■□□□□ 0.05
COL5A1-208ENST00000618395 SYN2Q92777 582 aaPredicted RBP15.39■□□□□ 0.05
COL5A1-208ENST00000618395 TP53INP1Q96A56 240 aa15.39■□□□□ 0.05
COL5A1-208ENST00000618395 ADI1Q9BV57 179 aa15.39■□□□□ 0.05
COL5A1-208ENST00000618395 KCNK4Q9NYG8 393 aa15.39■□□□□ 0.05
COL5A1-208ENST00000618395 MKLN1Q9UL63 735 aa15.39■□□□□ 0.05
COL5A1-208ENST00000618395 TDRKHQ9Y2W6 561 aaKnown RBP15.39■□□□□ 0.05
COL5A1-208ENST00000618395 ASMTLO95671 621 aa15.39■□□□□ 0.05
COL5A1-208ENST00000618395 TGM2P21980 687 aa15.39■□□□□ 0.05
COL5A1-208ENST00000618395 INTS10Q9NVR2 710 aaKnown RBP15.39■□□□□ 0.05
COL5A1-208ENST00000618395 TRPM5Q9NZQ8 1165 aa15.39■□□□□ 0.05
COL5A1-208ENST00000618395 RNF112Q9ULX5 631 aa15.39■□□□□ 0.05
COL5A1-208ENST00000618395 NDUFAF1Q9Y375 327 aa15.39■□□□□ 0.05
COL5A1-208ENST00000618395 RNMTO43148 476 aaKnown RBP15.39■□□□□ 0.05
COL5A1-208ENST00000618395 SERPIND1P05546 499 aa15.39■□□□□ 0.05
COL5A1-208ENST00000618395 RB1P06400 928 aa15.39■□□□□ 0.05
COL5A1-208ENST00000618395 CNPP09543 421 aaKnown RBP15.39■□□□□ 0.05
COL5A1-208ENST00000618395 CDC16Q13042 620 aa15.39■□□□□ 0.05
COL5A1-208ENST00000618395 CERKLQ49MI3 558 aaPredicted RBP15.39■□□□□ 0.05
COL5A1-208ENST00000618395 TIGD7Q6NT04 549 aaPredicted RBP15.39■□□□□ 0.05
COL5A1-208ENST00000618395 FAM120BQ96EK7 910 aaKnown RBP15.39■□□□□ 0.05
COL5A1-208ENST00000618395 STX16-NPEPL1H3BU86 382 aa15.39■□□□□ 0.05
COL5A1-208ENST00000618395 STX16O14662 325 aa15.39■□□□□ 0.05
COL5A1-208ENST00000618395 MAPK12P53778 367 aa15.39■□□□□ 0.05
COL5A1-208ENST00000618395 DEF8Q6ZN54 512 aa15.39■□□□□ 0.05
COL5A1-208ENST00000618395 SLC22A9Q8IVM8 553 aa15.39■□□□□ 0.05
COL5A1-208ENST00000618395 CATSPERZQ9NTU4 200 aa15.39■□□□□ 0.05
COL5A1-208ENST00000618395 TRAPPC8Q9Y2L5 1435 aa15.39■□□□□ 0.05
COL5A1-208ENST00000618395 REREQ9P2R6 1566 aa15.39■□□□□ 0.05
COL5A1-208ENST00000618395 PRMT3O60678 531 aa15.38■□□□□ 0.05
COL5A1-208ENST00000618395 YES1P07947 543 aa15.38■□□□□ 0.05
COL5A1-208ENST00000618395 YWHAZP63104 245 aaKnown RBP15.38■□□□□ 0.05
COL5A1-208ENST00000618395 LIN52Q52LA3 116 aa15.38■□□□□ 0.05
COL5A1-208ENST00000618395 C15orf38-AP3S2A0A0A6YYH1 394 aa15.38■□□□□ 0.05
COL5A1-208ENST00000618395 KLHL33A6NCF5 533 aa15.38■□□□□ 0.05
COL5A1-208ENST00000618395 SASH3O75995 380 aa15.38■□□□□ 0.05
COL5A1-208ENST00000618395 HERC3Q15034 1050 aa15.38■□□□□ 0.05
COL5A1-208ENST00000618395 PGS1Q32NB8 556 aa15.38■□□□□ 0.05
COL5A1-208ENST00000618395 GALNT18Q6P9A2 607 aa15.38■□□□□ 0.05
COL5A1-208ENST00000618395 ARPINQ7Z6K5 226 aa15.38■□□□□ 0.05
COL5A1-208ENST00000618395 ABI1Q8IZP0 508 aa15.38■□□□□ 0.05
COL5A1-208ENST00000618395 AASDHPPTQ9NRN7 309 aa15.38■□□□□ 0.05
COL5A1-208ENST00000618395 GPRC5DQ9NZD1 345 aa15.38■□□□□ 0.05
COL5A1-208ENST00000618395 FAM172BPA6NC97 362 aa15.38■□□□□ 0.05
COL5A1-208ENST00000618395 WWP2O00308 870 aa15.38■□□□□ 0.05
COL5A1-208ENST00000618395 PCNAP12004 261 aa15.38■□□□□ 0.05
COL5A1-208ENST00000618395 AKT1P31749 480 aa15.38■□□□□ 0.05
COL5A1-208ENST00000618395 IL18Q14116 193 aa15.38■□□□□ 0.05
COL5A1-208ENST00000618395 UNC5CLQ8IV45 518 aa15.38■□□□□ 0.05
COL5A1-208ENST00000618395 SPIRE2Q8WWL2 714 aa15.38■□□□□ 0.05
COL5A1-208ENST00000618395 TMCO6Q96DC7 493 aa15.38■□□□□ 0.05
COL5A1-208ENST00000618395 TMEM117Q9H0C3 514 aa15.38■□□□□ 0.05
COL5A1-208ENST00000618395 PLEKHG3A1L390 1219 aa15.38■□□□□ 0.05
COL5A1-208ENST00000618395 AP3S2P59780 193 aa15.38■□□□□ 0.05
COL5A1-208ENST00000618395 RAD51Q06609 339 aa15.38■□□□□ 0.05
COL5A1-208ENST00000618395 PAPD7Q5XG87 772 aaKnown RBP15.38■□□□□ 0.05
COL5A1-208ENST00000618395 ZSWIM2Q8NEG5 633 aa15.38■□□□□ 0.05
COL5A1-208ENST00000618395 DPF2Q92785 391 aa15.38■□□□□ 0.05
COL5A1-208ENST00000618395 RSAD1Q9HA92 442 aa15.38■□□□□ 0.05
COL5A1-208ENST00000618395 EMSYQ7Z589 1322 aa15.38■□□□□ 0.05
COL5A1-208ENST00000618395 AGRPO00253 132 aa15.38■□□□□ 0.05
COL5A1-208ENST00000618395 CHL1O00533 1208 aa15.38■□□□□ 0.05
COL5A1-208ENST00000618395 ENTPD5O75356 428 aa15.38■□□□□ 0.05
COL5A1-208ENST00000618395 SP100P23497 879 aaPredicted RBP15.38■□□□□ 0.05
COL5A1-208ENST00000618395 SPDYCQ5MJ68 293 aa15.38■□□□□ 0.05
COL5A1-208ENST00000618395 TRPV3Q8NET8 790 aa15.38■□□□□ 0.05
COL5A1-208ENST00000618395 RIOK2Q9BVS4 552 aaKnown RBP15.38■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms