RNA–Protein interactions for RNA: ENST00000618262.4

SRRT-216, Transcript of serrate, RNA effector molecule, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SRRT, Length 2,955 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-216ENST00000618262 MYCBPAPQ8TBZ2 947 aa12.51□□□□□ -0.41
SRRT-216ENST00000618262 TUBGCP5Q96RT8 1024 aa12.51□□□□□ -0.41
SRRT-216ENST00000618262 LPIN3Q9BQK8 851 aa12.51□□□□□ -0.41
SRRT-216ENST00000618262 STIM2Q9P246 746 aa12.51□□□□□ -0.41
SRRT-216ENST00000618262 VNN1O95497 513 aa12.5□□□□□ -0.41
SRRT-216ENST00000618262 FAM107AO95990 144 aa12.5□□□□□ -0.41
SRRT-216ENST00000618262 HLA-DRAP01903 254 aa12.5□□□□□ -0.41
SRRT-216ENST00000618262 AP3M2P53677 418 aa12.5□□□□□ -0.41
SRRT-216ENST00000618262 ADARP55265 1226 aaKnown RBP12.5□□□□□ -0.41
SRRT-216ENST00000618262 HPCAP84074 193 aa12.5□□□□□ -0.41
SRRT-216ENST00000618262 FPGSQ05932 587 aa12.5□□□□□ -0.41
SRRT-216ENST00000618262 MTMR3Q13615 1198 aa12.5□□□□□ -0.41
SRRT-216ENST00000618262 NCOA4Q13772 614 aa12.5□□□□□ -0.41
SRRT-216ENST00000618262 CCDC142Q17RM4 750 aa12.5□□□□□ -0.41
SRRT-216ENST00000618262 DCAF4L1Q3SXM0 396 aa12.5□□□□□ -0.41
SRRT-216ENST00000618262 CMPK2Q5EBM0 449 aa12.5□□□□□ -0.41
SRRT-216ENST00000618262 NLRP14Q86W24 1093 aa12.5□□□□□ -0.41
SRRT-216ENST00000618262 GLYCTKQ8IVS8 523 aa12.5□□□□□ -0.41
SRRT-216ENST00000618262 CCDC63Q8NA47 563 aa12.5□□□□□ -0.41
SRRT-216ENST00000618262 GBP5Q96PP8 586 aa12.5□□□□□ -0.41
SRRT-216ENST00000618262 UBE2TQ9NPD8 197 aaPredicted RBP12.5□□□□□ -0.41
SRRT-216ENST00000618262 DPP3Q9NY33 737 aa12.5□□□□□ -0.41
SRRT-216ENST00000618262 SCOCQ9UIL1 159 aa12.5□□□□□ -0.41
SRRT-216ENST00000618262 COMMD3-BMI1R4GMX3 469 aa12.5□□□□□ -0.41
SRRT-216ENST00000618262 SLC16A3O15427 465 aaKnown RBP12.5□□□□□ -0.41
SRRT-216ENST00000618262 ASLP04424 464 aa12.5□□□□□ -0.41
SRRT-216ENST00000618262 PON1P27169 355 aa12.5□□□□□ -0.41
SRRT-216ENST00000618262 SEMA3AQ14563 771 aa12.5□□□□□ -0.41
SRRT-216ENST00000618262 DSC3Q14574 896 aa12.5□□□□□ -0.41
SRRT-216ENST00000618262 DUOXA2Q1HG44 320 aa12.5□□□□□ -0.41
SRRT-216ENST00000618262 SPRED3Q2MJR0 410 aa12.5□□□□□ -0.41
SRRT-216ENST00000618262 ARL13BQ3SXY8 428 aa12.5□□□□□ -0.41
SRRT-216ENST00000618262 PHLDB3Q6NSJ2 640 aa12.5□□□□□ -0.41
SRRT-216ENST00000618262 GALNT7Q86SF2 657 aa12.5□□□□□ -0.41
SRRT-216ENST00000618262 JAZF1Q86VZ6 243 aa12.5□□□□□ -0.41
SRRT-216ENST00000618262 DDX42Q86XP3 938 aaKnown RBP eCLIP12.5□□□□□ -0.416e-7■□□□□ 10.1
SRRT-216ENST00000618262 STKLD1Q8NE28 680 aa12.5□□□□□ -0.41
SRRT-216ENST00000618262 NSMCE3Q96MG7 304 aa12.5□□□□□ -0.41
SRRT-216ENST00000618262 RGS18Q9NS28 235 aa12.5□□□□□ -0.41
SRRT-216ENST00000618262 B3GAT3O94766 335 aa12.49□□□□□ -0.41
SRRT-216ENST00000618262 OLFM2O95897 454 aa12.49□□□□□ -0.41
SRRT-216ENST00000618262 TMED10P49755 219 aaKnown RBP12.49□□□□□ -0.41
SRRT-216ENST00000618262 INSCQ1MX18 579 aa12.49□□□□□ -0.41
SRRT-216ENST00000618262 RASIP1Q5U651 963 aa12.49□□□□□ -0.41
SRRT-216ENST00000618262 C1orf53Q5VUE5 145 aa12.49□□□□□ -0.41
SRRT-216ENST00000618262 FOXB2Q5VYV0 432 aa12.49□□□□□ -0.41
SRRT-216ENST00000618262 KRT39Q6A163 491 aa12.49□□□□□ -0.41
SRRT-216ENST00000618262 TMEM173Q86WV6 379 aaPredicted RBP12.49□□□□□ -0.41
SRRT-216ENST00000618262 SLC44A2Q8IWA5 706 aaPredicted RBP12.49□□□□□ -0.41
SRRT-216ENST00000618262 LSMEM1Q8N8F7 131 aa12.49□□□□□ -0.41
SRRT-216ENST00000618262 C3orf58Q8NDZ4 430 aa12.49□□□□□ -0.41
SRRT-216ENST00000618262 HTATIP2Q9BUP3 242 aa12.49□□□□□ -0.41
SRRT-216ENST00000618262 PLSCR2Q9NRY7 297 aa12.49□□□□□ -0.41
SRRT-216ENST00000618262 FARSBQ9NSD9 589 aaKnown RBP12.49□□□□□ -0.41
SRRT-216ENST00000618262 HSFX1Q9UBD0 423 aa12.49□□□□□ -0.41
SRRT-216ENST00000618262 SIX4Q9UIU6 781 aa12.49□□□□□ -0.41
SRRT-216ENST00000618262 USH1CQ9Y6N9 552 aa12.49□□□□□ -0.41
SRRT-216ENST00000618262 GOLGA8CPA6NN73 597 aa12.49□□□□□ -0.41
SRRT-216ENST00000618262 KIAA0355O15063 1070 aa12.49□□□□□ -0.41
SRRT-216ENST00000618262 TNNC2P02585 160 aa12.49□□□□□ -0.41
SRRT-216ENST00000618262 BRCC3P46736 316 aa12.49□□□□□ -0.41
SRRT-216ENST00000618262 HABP4Q5JVS0 413 aaKnown RBP12.49□□□□□ -0.41
SRRT-216ENST00000618262 GLB1LQ6UWU2 654 aa12.49□□□□□ -0.41
SRRT-216ENST00000618262 CACNA2D4Q7Z3S7 1137 aa12.49□□□□□ -0.41
SRRT-216ENST00000618262 C12orf56Q8IXR9 622 aa12.49□□□□□ -0.41
SRRT-216ENST00000618262 ZC3H3Q8IXZ2 948 aaKnown RBP12.49□□□□□ -0.41
SRRT-216ENST00000618262 NXPE3Q969Y0 559 aa12.49□□□□□ -0.41
SRRT-216ENST00000618262 ANKRD36BP1Q96IX9 119 aa12.49□□□□□ -0.41
SRRT-216ENST00000618262 HAPLN3Q96S86 360 aa12.49□□□□□ -0.41
SRRT-216ENST00000618262 INTS2Q9H0H0 1204 aaKnown RBP12.49□□□□□ -0.41
SRRT-216ENST00000618262 APOBEC3GQ9HC16 384 aaKnown RBP12.49□□□□□ -0.41
SRRT-216ENST00000618262 TRPC7Q9HCX4 862 aa12.49□□□□□ -0.41
SRRT-216ENST00000618262 RAB20Q9NX57 234 aa12.49□□□□□ -0.41
SRRT-216ENST00000618262 PDP2Q9P2J9 529 aa12.49□□□□□ -0.41
SRRT-216ENST00000618262 SNX9Q9Y5X1 595 aa12.49□□□□□ -0.41
SRRT-216ENST00000618262 LCHNA4D1U4 455 aa12.48□□□□□ -0.41
SRRT-216ENST00000618262 SRRM3A6NNA2 597 aaPredicted RBP12.48□□□□□ -0.41
SRRT-216ENST00000618262 H0YGN5 161 aa12.48□□□□□ -0.41
SRRT-216ENST00000618262 AGPSO00116 658 aa12.48□□□□□ -0.41
SRRT-216ENST00000618262 C2CD2LO14523 706 aa12.48□□□□□ -0.41
SRRT-216ENST00000618262 CASQ2O14958 399 aaPredicted RBP12.48□□□□□ -0.41
SRRT-216ENST00000618262 FGBP02675 491 aa12.48□□□□□ -0.41
SRRT-216ENST00000618262 C4BPAP04003 597 aaKnown RBP12.48□□□□□ -0.41
SRRT-216ENST00000618262 THP07101 528 aa12.48□□□□□ -0.41
SRRT-216ENST00000618262 AXLP30530 894 aa12.48□□□□□ -0.41
SRRT-216ENST00000618262 GBP1P32455 592 aa12.48□□□□□ -0.41
SRRT-216ENST00000618262 GNALP38405 381 aa12.48□□□□□ -0.41
SRRT-216ENST00000618262 TUBB2AQ13885 445 aa12.48□□□□□ -0.41
SRRT-216ENST00000618262 ALDH16A1Q8IZ83 802 aa12.48□□□□□ -0.41
SRRT-216ENST00000618262 CGRRF1Q99675 332 aa12.48□□□□□ -0.41
SRRT-216ENST00000618262 TUBB2BQ9BVA1 445 aa12.48□□□□□ -0.41
SRRT-216ENST00000618262 CTNNAL1Q9UBT7 734 aa12.48□□□□□ -0.41
SRRT-216ENST00000618262 LAMP5Q9UJQ1 280 aa12.48□□□□□ -0.41
SRRT-216ENST00000618262 CFAP73A6NFT4 308 aa12.48□□□□□ -0.41
SRRT-216ENST00000618262 SERPINB4P48594 390 aa12.48□□□□□ -0.41
SRRT-216ENST00000618262 KPNA1P52294 538 aaPredicted RBP12.48□□□□□ -0.41
SRRT-216ENST00000618262 WDR5P61964 334 aaKnown RBP12.48□□□□□ -0.41
SRRT-216ENST00000618262 ZNF268Q14587 947 aaPredicted RBP12.48□□□□□ -0.41
SRRT-216ENST00000618262 TAF12Q16514 161 aa12.48□□□□□ -0.41
SRRT-216ENST00000618262 IFI16Q16666 785 aaKnown RBP12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms