RNA–Protein interactions for RNA: ENST00000617998.4

POLR2A-209, Transcript of RNA polymerase II subunit A, humanhuman

TSL 1 (best)

Gene POLR2A, Length 6,751 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2A-209ENST00000617998 ELP6Q0PNE2 266 aa11.26□□□□□ -0.61
POLR2A-209ENST00000617998 ZNF792Q3KQV3 632 aa11.26□□□□□ -0.61
POLR2A-209ENST00000617998 MRNIPQ6NTE8 343 aa11.26□□□□□ -0.61
POLR2A-209ENST00000617998 ADAM32Q8TC27 787 aa11.26□□□□□ -0.61
POLR2A-209ENST00000617998 CDT1Q9H211 546 aa11.26□□□□□ -0.61
POLR2A-209ENST00000617998 LHX5Q9H2C1 402 aa11.26□□□□□ -0.61
POLR2A-209ENST00000617998 SMARCAL1Q9NZC9 954 aa11.26□□□□□ -0.61
POLR2A-209ENST00000617998 LMO7Q8WWI1 1683 aa11.26□□□□□ -0.61
POLR2A-209ENST00000617998 PGRMC1O00264 195 aaKnown RBP11.26□□□□□ -0.61
POLR2A-209ENST00000617998 AVILO75366 819 aa11.26□□□□□ -0.61
POLR2A-209ENST00000617998 OR56A5P0C7T3 313 aa11.26□□□□□ -0.61
POLR2A-209ENST00000617998 TBC1D25Q3MII6 688 aa11.26□□□□□ -0.61
POLR2A-209ENST00000617998 ST13P5Q8NFI4 369 aaPredicted RBP11.26□□□□□ -0.61
POLR2A-209ENST00000617998 SH3RF2Q8TEC5 729 aa11.26□□□□□ -0.61
POLR2A-209ENST00000617998 BRD8Q9H0E9 1235 aa11.26□□□□□ -0.61
POLR2A-209ENST00000617998 FAM170BA6NMN3 283 aa11.26□□□□□ -0.61
POLR2A-209ENST00000617998 CENPAP49450 140 aa11.26□□□□□ -0.61
POLR2A-209ENST00000617998 DSELQ8IZU8 1212 aa11.26□□□□□ -0.61
POLR2A-209ENST00000617998 CCNYL1Q8N7R7 359 aa11.26□□□□□ -0.61
POLR2A-209ENST00000617998 CLIP3Q96DZ5 547 aa11.26□□□□□ -0.61
POLR2A-209ENST00000617998 KAZALD1Q96I82 304 aa11.26□□□□□ -0.61
POLR2A-209ENST00000617998 P2RY13Q9BPV8 354 aa11.26□□□□□ -0.61
POLR2A-209ENST00000617998 INTS7Q9NVH2 962 aaKnown RBP11.26□□□□□ -0.61
POLR2A-209ENST00000617998 AAR2Q9Y312 384 aaKnown RBP11.26□□□□□ -0.61
POLR2A-209ENST00000617998 SLC38A8A6NNN8 435 aa11.25□□□□□ -0.61
POLR2A-209ENST00000617998 NFICP08651 508 aa11.25□□□□□ -0.61
POLR2A-209ENST00000617998 ADH5P11766 374 aa11.25□□□□□ -0.61
POLR2A-209ENST00000617998 MNAT1P51948 309 aa11.25□□□□□ -0.61
POLR2A-209ENST00000617998 VGLL2Q8N8G2 317 aa11.25□□□□□ -0.61
POLR2A-209ENST00000617998 WFIKKN2Q8TEU8 576 aa11.25□□□□□ -0.61
POLR2A-209ENST00000617998 FAM172AQ8WUF8 416 aa11.25□□□□□ -0.61
POLR2A-209ENST00000617998 ELMO2Q96JJ3 720 aa11.25□□□□□ -0.61
POLR2A-209ENST00000617998 RHBGQ9H310 441 aa11.25□□□□□ -0.61
POLR2A-209ENST00000617998 BCAP29Q9UHQ4 241 aa11.25□□□□□ -0.61
POLR2A-209ENST00000617998 KIAA1210Q9ULL0 1709 aa11.25□□□□□ -0.61
POLR2A-209ENST00000617998 PIK3CDO00329 1044 aa11.25□□□□□ -0.61
POLR2A-209ENST00000617998 PITPNM1O00562 1244 aa11.25□□□□□ -0.61
POLR2A-209ENST00000617998 SLITRK3O94933 977 aa11.25□□□□□ -0.61
POLR2A-209ENST00000617998 SHROOM1Q2M3G4 852 aaPredicted RBP11.25□□□□□ -0.61
POLR2A-209ENST00000617998 COL13A1Q5TAT6 717 aaPredicted RBP11.25□□□□□ -0.61
POLR2A-209ENST00000617998 TMC2Q8TDI7 906 aa11.25□□□□□ -0.61
POLR2A-209ENST00000617998 FAM3CQ92520 227 aa11.25□□□□□ -0.61
POLR2A-209ENST00000617998 NHEJ1Q9H9Q4 299 aaPredicted RBP11.25□□□□□ -0.61
POLR2A-209ENST00000617998 HS6ST1O60243 411 aa11.25□□□□□ -0.61
POLR2A-209ENST00000617998 ATP9AO75110 1047 aa11.25□□□□□ -0.61
POLR2A-209ENST00000617998 TTC4O95801 387 aa11.25□□□□□ -0.61
POLR2A-209ENST00000617998 TKTP29401 623 aaKnown RBP11.25□□□□□ -0.61
POLR2A-209ENST00000617998 SLC1A1P43005 524 aa11.25□□□□□ -0.61
POLR2A-209ENST00000617998 CAPSQ13938 189 aa11.25□□□□□ -0.61
POLR2A-209ENST00000617998 BOP1Q14137 746 aaKnown RBP11.25□□□□□ -0.61
POLR2A-209ENST00000617998 EDRF1Q3B7T1 1238 aa11.25□□□□□ -0.61
POLR2A-209ENST00000617998 EPC2Q52LR7 807 aa11.25□□□□□ -0.61
POLR2A-209ENST00000617998 UNC93AQ86WB7 457 aa11.25□□□□□ -0.61
POLR2A-209ENST00000617998 TRIM42Q8IWZ5 723 aa11.25□□□□□ -0.61
POLR2A-209ENST00000617998 RHBDD1Q8TEB9 315 aa11.25□□□□□ -0.61
POLR2A-209ENST00000617998 KCNS3Q9BQ31 491 aa11.25□□□□□ -0.61
POLR2A-209ENST00000617998 MAP2P11137 1827 aaKnown RBP11.25□□□□□ -0.61
POLR2A-209ENST00000617998 IQANK1A0A1B0GTG1 560 aa11.25□□□□□ -0.61
POLR2A-209ENST00000617998 AP5Z1O43299 807 aa11.25□□□□□ -0.61
POLR2A-209ENST00000617998 VPS26AO75436 327 aa11.25□□□□□ -0.61
POLR2A-209ENST00000617998 NPR3P17342 541 aa11.25□□□□□ -0.61
POLR2A-209ENST00000617998 CLK3P49761 638 aaKnown RBP11.25□□□□□ -0.61
POLR2A-209ENST00000617998 MAPK10P53779 464 aa11.25□□□□□ -0.61
POLR2A-209ENST00000617998 GRM3Q14832 879 aa11.25□□□□□ -0.61
POLR2A-209ENST00000617998 ACAP2Q15057 778 aa11.25□□□□□ -0.61
POLR2A-209ENST00000617998 AMIGO3Q86WK7 504 aa11.25□□□□□ -0.61
POLR2A-209ENST00000617998 RCOR2Q8IZ40 523 aa11.25□□□□□ -0.61
POLR2A-209ENST00000617998 ISM1B1AKI9 464 aa11.25□□□□□ -0.61
POLR2A-209ENST00000617998 POLR3GO15318 223 aaPredicted RBP11.25□□□□□ -0.61
POLR2A-209ENST00000617998 KRT37O76014 449 aa11.25□□□□□ -0.61
POLR2A-209ENST00000617998 INPP4AQ96PE3 977 aaPredicted RBP11.25□□□□□ -0.61
POLR2A-209ENST00000617998 LMAN1LQ9HAT1 526 aa11.25□□□□□ -0.61
POLR2A-209ENST00000617998 POPDC2Q9HBU9 364 aa11.25□□□□□ -0.61
POLR2A-209ENST00000617998 TTC7AQ9ULT0 858 aaPredicted RBP11.25□□□□□ -0.61
POLR2A-209ENST00000617998 WDR3Q9UNX4 943 aaKnown RBP eCLIP11.25□□□□□ -0.61
POLR2A-209ENST00000617998 ZSCAN5CA6NGD5 496 aaPredicted RBP11.24□□□□□ -0.61
POLR2A-209ENST00000617998 MLYCDO95822 493 aa11.24□□□□□ -0.61
POLR2A-209ENST00000617998 NUDT14O95848 222 aa11.24□□□□□ -0.61
POLR2A-209ENST00000617998 AGXTP21549 392 aa11.24□□□□□ -0.61
POLR2A-209ENST00000617998 ALAS2P22557 587 aa11.24□□□□□ -0.61
POLR2A-209ENST00000617998 CASRP41180 1078 aa11.24□□□□□ -0.61
POLR2A-209ENST00000617998 DDX39BQ13838 428 aaKnown RBP11.24□□□□□ -0.61
POLR2A-209ENST00000617998 CBX2Q14781 532 aaPredicted RBP11.24□□□□□ -0.61
POLR2A-209ENST00000617998 KRT31Q15323 416 aa11.24□□□□□ -0.61
POLR2A-209ENST00000617998 UGP2Q16851 508 aa11.24□□□□□ -0.61
POLR2A-209ENST00000617998 SH3BP5LQ7L8J4 393 aa11.24□□□□□ -0.61
POLR2A-209ENST00000617998 MON1AQ86VX9 555 aa11.24□□□□□ -0.61
POLR2A-209ENST00000617998 MYO1HQ8N1T3 1032 aa11.24□□□□□ -0.61
POLR2A-209ENST00000617998 STAU2Q9NUL3 570 aaKnown RBP eCLIP11.24□□□□□ -0.61
POLR2A-209ENST00000617998 GRXCR1A8MXD5 290 aa11.24□□□□□ -0.61
POLR2A-209ENST00000617998 MAPTP10636 758 aaKnown RBP11.24□□□□□ -0.61
POLR2A-209ENST00000617998 CLCN6P51797 869 aa11.24□□□□□ -0.61
POLR2A-209ENST00000617998 PARGQ86W56 976 aa11.24□□□□□ -0.61
POLR2A-209ENST00000617998 TOP6BLQ8N6T0 577 aa11.24□□□□□ -0.61
POLR2A-209ENST00000617998 NCLNQ969V3 563 aa11.24□□□□□ -0.61
POLR2A-209ENST00000617998 ATXN7L3BQ96GX2 97 aa11.24□□□□□ -0.61
POLR2A-209ENST00000617998 PBKQ96KB5 322 aa11.24□□□□□ -0.61
POLR2A-209ENST00000617998 ACO2Q99798 780 aaKnown RBP11.24□□□□□ -0.61
POLR2A-209ENST00000617998 MRPL42Q9Y6G3 142 aaKnown RBP11.24□□□□□ -0.61
POLR2A-209ENST00000617998 TRBV23OR9-2A0A075B6M9 112 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms