RNA–Protein interactions for RNA: ENST00000617617.4

PDPN-211, Transcript of podoplanin, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PDPN, Length 2,808 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-211ENST00000617617 KRIT1O00522 736 aa12.19□□□□□ -0.46
PDPN-211ENST00000617617 ZFXP17010 805 aaPredicted RBP12.19□□□□□ -0.46
PDPN-211ENST00000617617 SSR1P43307 286 aaKnown RBP12.19□□□□□ -0.46
PDPN-211ENST00000617617 MTMR3Q13615 1198 aa12.19□□□□□ -0.46
PDPN-211ENST00000617617 CCNG2Q16589 344 aa12.19□□□□□ -0.46
PDPN-211ENST00000617617 DUSP6Q16828 381 aa12.19□□□□□ -0.46
PDPN-211ENST00000617617 PLPP4Q5VZY2 271 aa12.19□□□□□ -0.46
PDPN-211ENST00000617617 TMEM150AQ86TG1 271 aa12.19□□□□□ -0.46
PDPN-211ENST00000617617 ZDHHC14Q8IZN3 488 aa12.19□□□□□ -0.46
PDPN-211ENST00000617617 PRELID2Q8N945 189 aa12.19□□□□□ -0.46
PDPN-211ENST00000617617 LRRN4CLQ8ND94 238 aa12.19□□□□□ -0.46
PDPN-211ENST00000617617 GIPC2Q8TF65 315 aa12.19□□□□□ -0.46
PDPN-211ENST00000617617 EDEM1Q92611 657 aa12.19□□□□□ -0.46
PDPN-211ENST00000617617 FCRL2Q96LA5 508 aaPredicted RBP12.19□□□□□ -0.46
PDPN-211ENST00000617617 NKX2-4Q9H2Z4 354 aa12.19□□□□□ -0.46
PDPN-211ENST00000617617 RBM12Q9NTZ6 932 aaKnown RBP12.19□□□□□ -0.46
PDPN-211ENST00000617617 DDIT4Q9NX09 232 aa12.19□□□□□ -0.46
PDPN-211ENST00000617617 PCSK1NQ9UHG2 260 aa12.19□□□□□ -0.46
PDPN-211ENST00000617617 RAD54BQ9Y620 910 aa12.19□□□□□ -0.46
PDPN-211ENST00000617617 LATS1O95835 1130 aa12.19□□□□□ -0.46
PDPN-211ENST00000617617 TGM2P21980 687 aa12.19□□□□□ -0.46
PDPN-211ENST00000617617 DDX6P26196 483 aaKnown RBP eCLIP12.19□□□□□ -0.46
PDPN-211ENST00000617617 CCR1P32246 355 aa12.19□□□□□ -0.46
PDPN-211ENST00000617617 PBX2P40425 430 aa12.19□□□□□ -0.46
PDPN-211ENST00000617617 TFDP2Q14188 446 aa12.19□□□□□ -0.46
PDPN-211ENST00000617617 EFHC2Q5JST6 749 aa12.19□□□□□ -0.46
PDPN-211ENST00000617617 MANEALQ5VSG8 457 aa12.19□□□□□ -0.46
PDPN-211ENST00000617617 AADACL2Q6P093 401 aa12.19□□□□□ -0.46
PDPN-211ENST00000617617 TMEM184AQ6ZMB5 413 aa12.19□□□□□ -0.46
PDPN-211ENST00000617617 KIAA1958Q8N8K9 716 aa12.19□□□□□ -0.46
PDPN-211ENST00000617617 RNF157Q96PX1 679 aa12.19□□□□□ -0.46
PDPN-211ENST00000617617 KCTD15Q96SI1 283 aaPredicted RBP12.19□□□□□ -0.46
PDPN-211ENST00000617617 TRPM5Q9NZQ8 1165 aa12.19□□□□□ -0.46
PDPN-211ENST00000617617 LMCD1Q9NZU5 365 aa12.19□□□□□ -0.46
PDPN-211ENST00000617617 LRRD1A4D1F6 860 aa12.18□□□□□ -0.46
PDPN-211ENST00000617617 C8AP07357 584 aa12.18□□□□□ -0.46
PDPN-211ENST00000617617 DPYSQ14117 519 aa12.18□□□□□ -0.46
PDPN-211ENST00000617617 DHX34Q14147 1143 aaKnown RBP12.18□□□□□ -0.46
PDPN-211ENST00000617617 ANKRD20A8PQ5CZ79 823 aa12.18□□□□□ -0.46
PDPN-211ENST00000617617 EIF1ADQ8N9N8 165 aaKnown RBP12.18□□□□□ -0.46
PDPN-211ENST00000617617 PLD4Q96BZ4 506 aa12.18□□□□□ -0.46
PDPN-211ENST00000617617 HERPUD2Q9BSE4 406 aa12.18□□□□□ -0.46
PDPN-211ENST00000617617 WDCPQ9H6R7 721 aa12.18□□□□□ -0.46
PDPN-211ENST00000617617 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP12.18□□□□□ -0.46
PDPN-211ENST00000617617 DRG1Q9Y295 367 aaKnown RBP12.18□□□□□ -0.46
PDPN-211ENST00000617617 LRG1P02750 347 aa12.18□□□□□ -0.46
PDPN-211ENST00000617617 TNFRSF8P28908 595 aa12.18□□□□□ -0.46
PDPN-211ENST00000617617 WEE1P30291 646 aa12.18□□□□□ -0.46
PDPN-211ENST00000617617 IRS1P35568 1242 aa12.18□□□□□ -0.46
PDPN-211ENST00000617617 DNA2P51530 1060 aa12.18□□□□□ -0.46
PDPN-211ENST00000617617 CDH6P55285 790 aa12.18□□□□□ -0.46
PDPN-211ENST00000617617 C5orf22Q49AR2 442 aa12.18□□□□□ -0.46
PDPN-211ENST00000617617 HECTD3Q5T447 861 aa12.18□□□□□ -0.46
PDPN-211ENST00000617617 PPP2R2DQ66LE6 453 aa12.18□□□□□ -0.46
PDPN-211ENST00000617617 SYDE1Q6ZW31 735 aaPredicted RBP12.18□□□□□ -0.46
PDPN-211ENST00000617617 GPR161Q8N6U8 529 aaKnown RBP12.18□□□□□ -0.46
PDPN-211ENST00000617617 SEC14L1Q92503 715 aa12.18□□□□□ -0.46
PDPN-211ENST00000617617 NKD2Q969F2 451 aaPredicted RBP12.18□□□□□ -0.46
PDPN-211ENST00000617617 DNMT3LQ9UJW3 386 aa12.18□□□□□ -0.46
PDPN-211ENST00000617617 STOML2Q9UJZ1 356 aa12.18□□□□□ -0.46
PDPN-211ENST00000617617 H3BRJ5 948 aa12.17□□□□□ -0.46
PDPN-211ENST00000617617 APOC4-APOC2K7ER74 178 aa12.17□□□□□ -0.46
PDPN-211ENST00000617617 APOC2P02655 101 aa12.17□□□□□ -0.46
PDPN-211ENST00000617617 CDC25CP30307 473 aa12.17□□□□□ -0.46
PDPN-211ENST00000617617 NR2C2P49116 596 aa12.17□□□□□ -0.46
PDPN-211ENST00000617617 ATXN1P54253 815 aaKnown RBP12.17□□□□□ -0.46
PDPN-211ENST00000617617 C2orf54Q08AI8 447 aa12.17□□□□□ -0.46
PDPN-211ENST00000617617 SMTNL2Q2TAL5 461 aa12.17□□□□□ -0.46
PDPN-211ENST00000617617 KCNT1Q5JUK3 1230 aa12.17□□□□□ -0.46
PDPN-211ENST00000617617 SPRED2Q7Z698 418 aa12.17□□□□□ -0.46
PDPN-211ENST00000617617 ELMOD1Q8N336 334 aa12.17□□□□□ -0.46
PDPN-211ENST00000617617 NOA1Q8NC60 698 aaKnown RBP12.17□□□□□ -0.46
PDPN-211ENST00000617617 GPR152Q8TDT2 470 aa12.17□□□□□ -0.46
PDPN-211ENST00000617617 HSPH1Q92598 858 aa12.17□□□□□ -0.46
PDPN-211ENST00000617617 RNF25Q96BH1 459 aaPredicted RBP12.17□□□□□ -0.46
PDPN-211ENST00000617617 DCLK3Q9C098 648 aa12.17□□□□□ -0.46
PDPN-211ENST00000617617 PPARGC1AQ9UBK2 798 aaKnown RBP12.17□□□□□ -0.46
PDPN-211ENST00000617617 NEU3Q9UQ49 428 aa12.17□□□□□ -0.46
PDPN-211ENST00000617617 FAM187AA6NFU0 413 aa12.17□□□□□ -0.46
PDPN-211ENST00000617617 WASH4PA8MWX3 477 aa12.17□□□□□ -0.46
PDPN-211ENST00000617617 I6L893 689 aaPredicted RBP12.17□□□□□ -0.46
PDPN-211ENST00000617617 TLR5O60602 858 aa12.17□□□□□ -0.46
PDPN-211ENST00000617617 TCF3P15923 654 aa12.17□□□□□ -0.46
PDPN-211ENST00000617617 ATP5C1P36542 298 aaKnown RBP12.17□□□□□ -0.46
PDPN-211ENST00000617617 NME3Q13232 169 aa12.17□□□□□ -0.46
PDPN-211ENST00000617617 KRT81Q14533 505 aa12.17□□□□□ -0.46
PDPN-211ENST00000617617 CA9Q16790 459 aa12.17□□□□□ -0.46
PDPN-211ENST00000617617 ODF2Q5BJF6 829 aa12.17□□□□□ -0.46
PDPN-211ENST00000617617 ZC3H12AQ5D1E8 599 aaKnown RBP12.17□□□□□ -0.46
PDPN-211ENST00000617617 PPM1LQ5SGD2 360 aa12.17□□□□□ -0.46
PDPN-211ENST00000617617 SCYL2Q6P3W7 929 aa12.17□□□□□ -0.46
PDPN-211ENST00000617617 FAM131BQ86XD5 332 aa12.17□□□□□ -0.46
PDPN-211ENST00000617617 CCDC50Q8IVM0 306 aa12.17□□□□□ -0.46
PDPN-211ENST00000617617 ZNF683Q8IZ20 524 aa12.17□□□□□ -0.46
PDPN-211ENST00000617617 PQLC3Q8N755 202 aa12.17□□□□□ -0.46
PDPN-211ENST00000617617 MRPL38Q96DV4 380 aaKnown RBP12.17□□□□□ -0.46
PDPN-211ENST00000617617 ZNF512Q96ME7 567 aaPredicted RBP12.17□□□□□ -0.46
PDPN-211ENST00000617617 ZNF334Q9HCZ1 680 aaPredicted RBP12.17□□□□□ -0.46
PDPN-211ENST00000617617 ANLNQ9NQW6 1124 aa12.17□□□□□ -0.46
PDPN-211ENST00000617617 DZANK1Q9NVP4 752 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms