RNA–Protein interactions for RNA: ENST00000617024.1

SPTSSB-204, Transcript of serine palmitoyltransferase small subunit B, humanhuman

BASIC

Gene SPTSSB, Length 1,292 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTSSB-204ENST00000617024 H2AFVQ71UI9 128 aa17.08■□□□□ 0.32
SPTSSB-204ENST00000617024 SERPINB11Q96P15 392 aa17.08■□□□□ 0.32
SPTSSB-204ENST00000617024 DCLK3Q9C098 648 aa17.08■□□□□ 0.32
SPTSSB-204ENST00000617024 SMOC2Q9H3U7 446 aa17.08■□□□□ 0.32
SPTSSB-204ENST00000617024 MRPL47Q9HD33 250 aaKnown RBP17.08■□□□□ 0.32
SPTSSB-204ENST00000617024 LSM7Q9UK45 103 aaKnown RBP17.08■□□□□ 0.32
SPTSSB-204ENST00000617024 STAP1Q9ULZ2 295 aa17.08■□□□□ 0.32
SPTSSB-204ENST00000617024 SCINQ9Y6U3 715 aa17.08■□□□□ 0.32
SPTSSB-204ENST00000617024 E2F8A0AVK6 867 aa17.07■□□□□ 0.32
SPTSSB-204ENST00000617024 SOWAHDA6NJG2 315 aa17.07■□□□□ 0.32
SPTSSB-204ENST00000617024 ZNF263O14978 683 aa17.07■□□□□ 0.32
SPTSSB-204ENST00000617024 STC2O76061 302 aa17.07■□□□□ 0.32
SPTSSB-204ENST00000617024 GJB6O95452 261 aa17.07■□□□□ 0.32
SPTSSB-204ENST00000617024 RFC1P35251 1148 aaPredicted RBP17.07■□□□□ 0.32
SPTSSB-204ENST00000617024 USP4Q13107 963 aa17.07■□□□□ 0.32
SPTSSB-204ENST00000617024 GRM2Q14416 872 aa17.07■□□□□ 0.32
SPTSSB-204ENST00000617024 MTF1Q14872 753 aa17.07■□□□□ 0.32
SPTSSB-204ENST00000617024 TRIP4Q15650 581 aaPredicted RBP17.07■□□□□ 0.32
SPTSSB-204ENST00000617024 SLC25A52Q3SY17 297 aa17.07■□□□□ 0.32
SPTSSB-204ENST00000617024 HTR3DQ70Z44 454 aa17.07■□□□□ 0.32
SPTSSB-204ENST00000617024 EMC1Q8N766 993 aa17.07■□□□□ 0.32
SPTSSB-204ENST00000617024 KIAA1958Q8N8K9 716 aa17.07■□□□□ 0.32
SPTSSB-204ENST00000617024 JOSD2Q8TAC2 188 aa17.07■□□□□ 0.32
SPTSSB-204ENST00000617024 ADAM32Q8TC27 787 aa17.07■□□□□ 0.32
SPTSSB-204ENST00000617024 RXFP2Q8WXD0 754 aa17.07■□□□□ 0.32
SPTSSB-204ENST00000617024 PLD4Q96BZ4 506 aa17.07■□□□□ 0.32
SPTSSB-204ENST00000617024 NPY6RQ99463 290 aa17.07■□□□□ 0.32
SPTSSB-204ENST00000617024 THAP2Q9H0W7 228 aa17.07■□□□□ 0.32
SPTSSB-204ENST00000617024 FAM204AQ9H8W3 233 aa17.07■□□□□ 0.32
SPTSSB-204ENST00000617024 TMEM51Q9NW97 253 aa17.07■□□□□ 0.32
SPTSSB-204ENST00000617024 TLR6Q9Y2C9 796 aa17.07■□□□□ 0.32
SPTSSB-204ENST00000617024 ZNF510Q9Y2H8 683 aa17.07■□□□□ 0.32
SPTSSB-204ENST00000617024 PRR23AA6NEV1 266 aa17.06■□□□□ 0.32
SPTSSB-204ENST00000617024 C2CD4BA6NLJ0 364 aa17.06■□□□□ 0.32
SPTSSB-204ENST00000617024 EIF3CLB5ME19 914 aaKnown RBP17.06■□□□□ 0.32
SPTSSB-204ENST00000617024 M0QYT0 321 aa17.06■□□□□ 0.32
SPTSSB-204ENST00000617024 SLC9A3R1O14745 358 aaPredicted RBP17.06■□□□□ 0.32
SPTSSB-204ENST00000617024 CHADO15335 359 aa17.06■□□□□ 0.32
SPTSSB-204ENST00000617024 ATMINO43313 823 aaPredicted RBP17.06■□□□□ 0.32
SPTSSB-204ENST00000617024 MSI1O43347 362 aaKnown RBP17.06■□□□□ 0.32
SPTSSB-204ENST00000617024 GALR2O43603 387 aaPredicted RBP17.06■□□□□ 0.32
SPTSSB-204ENST00000617024 LCA5LO95447 670 aa17.06■□□□□ 0.32
SPTSSB-204ENST00000617024 F9P00740 461 aa17.06■□□□□ 0.32
SPTSSB-204ENST00000617024 CYP1A2P05177 515 aa17.06■□□□□ 0.32
SPTSSB-204ENST00000617024 PTMAP06454 111 aaKnown RBP17.06■□□□□ 0.32
SPTSSB-204ENST00000617024 GPD1P21695 349 aa17.06■□□□□ 0.32
SPTSSB-204ENST00000617024 GDI1P31150 447 aa17.06■□□□□ 0.32
SPTSSB-204ENST00000617024 SDC4P31431 198 aa17.06■□□□□ 0.32
SPTSSB-204ENST00000617024 FLT3P36888 993 aa17.06■□□□□ 0.32
SPTSSB-204ENST00000617024 MAGEA1P43355 309 aa17.06■□□□□ 0.32
SPTSSB-204ENST00000617024 HARS2P49590 506 aaKnown RBP17.06■□□□□ 0.32
SPTSSB-204ENST00000617024 SULT1E1P49888 294 aa17.06■□□□□ 0.32
SPTSSB-204ENST00000617024 TBX4P57082 545 aa17.06■□□□□ 0.32
SPTSSB-204ENST00000617024 RPL7AP62424 266 aaKnown RBP17.06■□□□□ 0.32
SPTSSB-204ENST00000617024 FOXK2Q01167 660 aa17.06■□□□□ 0.32
SPTSSB-204ENST00000617024 FCHO2Q0JRZ9 810 aa17.06■□□□□ 0.32
SPTSSB-204ENST00000617024 NNTQ13423 1086 aa17.06■□□□□ 0.32
SPTSSB-204ENST00000617024 ARHGAP29Q52LW3 1261 aa17.06■□□□□ 0.32
SPTSSB-204ENST00000617024 PPP1R15BQ5SWA1 713 aa17.06■□□□□ 0.32
SPTSSB-204ENST00000617024 TAC4Q86UU9 113 aa17.06■□□□□ 0.32
SPTSSB-204ENST00000617024 UNC45BQ8IWX7 931 aa17.06■□□□□ 0.32
SPTSSB-204ENST00000617024 CTNNBL1Q8WYA6 563 aaPredicted RBP17.06■□□□□ 0.32
SPTSSB-204ENST00000617024 RNF34Q969K3 372 aa17.06■□□□□ 0.32
SPTSSB-204ENST00000617024 NT5C3BQ969T7 300 aa17.06■□□□□ 0.32
SPTSSB-204ENST00000617024 PDLIM2Q96JY6 352 aa17.06■□□□□ 0.32
SPTSSB-204ENST00000617024 CFAP57Q96MR6 1250 aa17.06■□□□□ 0.32
SPTSSB-204ENST00000617024 MCEEQ96PE7 176 aa17.06■□□□□ 0.32
SPTSSB-204ENST00000617024 EIF3CQ99613 913 aaKnown RBP17.06■□□□□ 0.32
SPTSSB-204ENST00000617024 IRF2BPLQ9H1B7 796 aa17.06■□□□□ 0.32
SPTSSB-204ENST00000617024 BRD9Q9H8M2 597 aa17.06■□□□□ 0.32
SPTSSB-204ENST00000617024 LUC7LQ9NQ29 371 aaKnown RBP17.06■□□□□ 0.32
SPTSSB-204ENST00000617024 DDIT4Q9NX09 232 aa17.06■□□□□ 0.32
SPTSSB-204ENST00000617024 DUS2Q9NX74 493 aaKnown RBP17.06■□□□□ 0.32
SPTSSB-204ENST00000617024 TBC1D14Q9P2M4 693 aa17.06■□□□□ 0.32
SPTSSB-204ENST00000617024 SORCS3Q9UPU3 1222 aa17.06■□□□□ 0.32
SPTSSB-204ENST00000617024 SYNJ2BP-COX16A0A087WUM0 186 aa17.05■□□□□ 0.32
SPTSSB-204ENST00000617024 NDUFA10O95299 355 aa17.05■□□□□ 0.32
SPTSSB-204ENST00000617024 IPO7O95373 1038 aaKnown RBP17.05■□□□□ 0.32
SPTSSB-204ENST00000617024 IGLV3-25P01717 112 aa17.05■□□□□ 0.32
SPTSSB-204ENST00000617024 TMEM253P0C7T8 217 aa17.05■□□□□ 0.32
SPTSSB-204ENST00000617024 DESP17661 470 aa17.05■□□□□ 0.32
SPTSSB-204ENST00000617024 PITX1P78337 314 aaPredicted RBP17.05■□□□□ 0.32
SPTSSB-204ENST00000617024 RING1Q06587 406 aa17.05■□□□□ 0.32
SPTSSB-204ENST00000617024 NME3Q13232 169 aa17.05■□□□□ 0.32
SPTSSB-204ENST00000617024 CCDC14Q49A88 953 aa17.05■□□□□ 0.32
SPTSSB-204ENST00000617024 TRNP1Q6NT89 227 aa17.05■□□□□ 0.32
SPTSSB-204ENST00000617024 RAD9BQ6WBX8 426 aa17.05■□□□□ 0.32
SPTSSB-204ENST00000617024 SND1Q7KZF4 910 aaKnown RBP eCLIP17.05■□□□□ 0.32
SPTSSB-204ENST00000617024 TMEM139Q8IV31 216 aa17.05■□□□□ 0.32
SPTSSB-204ENST00000617024 LRRC8AQ8IWT6 810 aa17.05■□□□□ 0.32
SPTSSB-204ENST00000617024 TMEM105Q8N8V8 129 aa17.05■□□□□ 0.32
SPTSSB-204ENST00000617024 RIN3Q8TB24 985 aa17.05■□□□□ 0.32
SPTSSB-204ENST00000617024 OSCP1Q8WVF1 389 aa17.05■□□□□ 0.32
SPTSSB-204ENST00000617024 IRF7Q92985 503 aa17.05■□□□□ 0.32
SPTSSB-204ENST00000617024 WBP2Q969T9 261 aa17.05■□□□□ 0.32
SPTSSB-204ENST00000617024 PGAP3Q96FM1 320 aaPredicted RBP17.05■□□□□ 0.32
SPTSSB-204ENST00000617024 TBCBQ99426 244 aa17.05■□□□□ 0.32
SPTSSB-204ENST00000617024 PACSIN1Q9BY11 444 aa17.05■□□□□ 0.32
SPTSSB-204ENST00000617024 LINC00597Q9H2U6 94 aa17.05■□□□□ 0.32
SPTSSB-204ENST00000617024 SLTMQ9NWH9 1034 aaKnown RBP eCLIP17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms