RNA–Protein interactions for RNA: ENST00000616939.4

GPN1-212, Transcript of GPN-loop GTPase 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene GPN1, Length 1,832 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPN1-212ENST00000616939 MAVSQ7Z434 540 aa16.08■□□□□ 0.16
GPN1-212ENST00000616939 TICAM1Q8IUC6 712 aa16.08■□□□□ 0.16
GPN1-212ENST00000616939 CDKL3Q8IVW4 592 aaPredicted RBP16.08■□□□□ 0.16
GPN1-212ENST00000616939 KLHL23Q8NBE8 558 aa16.08■□□□□ 0.16
GPN1-212ENST00000616939 TFB1MQ8WVM0 346 aaKnown RBP16.08■□□□□ 0.16
GPN1-212ENST00000616939 GFM2Q969S9 779 aaKnown RBP16.08■□□□□ 0.16
GPN1-212ENST00000616939 PEBP4Q96S96 227 aa16.08■□□□□ 0.16
GPN1-212ENST00000616939 SORT1Q99523 831 aa16.08■□□□□ 0.16
GPN1-212ENST00000616939 CNPY3Q9BT09 278 aa16.08■□□□□ 0.16
GPN1-212ENST00000616939 PREBQ9HCU5 417 aa16.08■□□□□ 0.16
GPN1-212ENST00000616939 JPH1Q9HDC5 661 aaPredicted RBP16.08■□□□□ 0.16
GPN1-212ENST00000616939 GALNT8Q9NY28 637 aa16.08■□□□□ 0.16
GPN1-212ENST00000616939 MOCS1Q9NZB8 636 aa16.08■□□□□ 0.16
GPN1-212ENST00000616939 FBXO40Q9UH90 709 aa16.08■□□□□ 0.16
GPN1-212ENST00000616939 DCDC2Q9UHG0 476 aa16.08■□□□□ 0.16
GPN1-212ENST00000616939 PCSK1NQ9UHG2 260 aa16.08■□□□□ 0.16
GPN1-212ENST00000616939 BCAP29Q9UHQ4 241 aa16.08■□□□□ 0.16
GPN1-212ENST00000616939 KCNN4O15554 427 aa16.07■□□□□ 0.16
GPN1-212ENST00000616939 ITM2AO43736 263 aa16.07■□□□□ 0.16
GPN1-212ENST00000616939 DNAJA2O60884 412 aa16.07■□□□□ 0.16
GPN1-212ENST00000616939 PDE5AO76074 875 aa16.07■□□□□ 0.16
GPN1-212ENST00000616939 ALDH1A2O94788 518 aa16.07■□□□□ 0.16
GPN1-212ENST00000616939 TNFAIP8O95379 198 aa16.07■□□□□ 0.16
GPN1-212ENST00000616939 CLPTM1O96005 669 aa16.07■□□□□ 0.16
GPN1-212ENST00000616939 ZBED1O96006 694 aa16.07■□□□□ 0.16
GPN1-212ENST00000616939 ERBB2P04626 1255 aa16.07■□□□□ 0.16
GPN1-212ENST00000616939 COX4I1P13073 169 aa16.07■□□□□ 0.16
GPN1-212ENST00000616939 HMGB2P26583 209 aaKnown RBP16.07■□□□□ 0.16
GPN1-212ENST00000616939 SERPINB6P35237 376 aa16.07■□□□□ 0.16
GPN1-212ENST00000616939 NRLP54845 237 aa16.07■□□□□ 0.16
GPN1-212ENST00000616939 SULT2A1Q06520 285 aa16.07■□□□□ 0.16
GPN1-212ENST00000616939 PCLAFQ15004 111 aa16.07■□□□□ 0.16
GPN1-212ENST00000616939 TLR1Q15399 786 aa16.07■□□□□ 0.16
GPN1-212ENST00000616939 DUOXA2Q1HG44 320 aa16.07■□□□□ 0.16
GPN1-212ENST00000616939 GRAMD1BQ3KR37 738 aa16.07■□□□□ 0.16
GPN1-212ENST00000616939 FAXCQ5TGI0 409 aa16.07■□□□□ 0.16
GPN1-212ENST00000616939 METTL21CQ5VZV1 264 aa16.07■□□□□ 0.16
GPN1-212ENST00000616939 SLC9A4Q6AI14 798 aa16.07■□□□□ 0.16
GPN1-212ENST00000616939 C1orf228Q6PIY5 440 aa16.07■□□□□ 0.16
GPN1-212ENST00000616939 RBM44Q6ZP01 1051 aaKnown RBP16.07■□□□□ 0.16
GPN1-212ENST00000616939 ZCCHC23Q6ZST2 131 aa16.07■□□□□ 0.16
GPN1-212ENST00000616939 MAP7D3Q8IWC1 876 aa16.07■□□□□ 0.16
GPN1-212ENST00000616939 DEFB107AQ8IZN7 70 aa16.07■□□□□ 0.16
GPN1-212ENST00000616939 POU5F2Q8N7G0 328 aa16.07■□□□□ 0.16
GPN1-212ENST00000616939 ADCY4Q8NFM4 1077 aa16.07■□□□□ 0.16
GPN1-212ENST00000616939 DEPDC1BQ8WUY9 529 aa16.07■□□□□ 0.16
GPN1-212ENST00000616939 NMD3Q96D46 503 aaKnown RBP16.07■□□□□ 0.16
GPN1-212ENST00000616939 DNAAF2Q9NVR5 837 aaKnown RBP16.07■□□□□ 0.16
GPN1-212ENST00000616939 INPP5FQ9Y2H2 1132 aa16.07■□□□□ 0.16
GPN1-212ENST00000616939 MGAMO43451 1857 aa16.06■□□□□ 0.16
GPN1-212ENST00000616939 ARHGAP10A1A4S6 786 aa16.06■□□□□ 0.16
GPN1-212ENST00000616939 LRRIQ4A6NIV6 560 aa16.06■□□□□ 0.16
GPN1-212ENST00000616939 TXNDC9O14530 226 aa16.06■□□□□ 0.16
GPN1-212ENST00000616939 OR6B1O95007 311 aa16.06■□□□□ 0.16
GPN1-212ENST00000616939 NR3C2P08235 984 aa16.06■□□□□ 0.16
GPN1-212ENST00000616939 ACTR2P61160 394 aa16.06■□□□□ 0.16
GPN1-212ENST00000616939 RPL10AP62906 217 aaKnown RBP16.06■□□□□ 0.16
GPN1-212ENST00000616939 NIPAL4Q0D2K0 466 aa16.06■□□□□ 0.16
GPN1-212ENST00000616939 TRPC3Q13507 836 aa16.06■□□□□ 0.16
GPN1-212ENST00000616939 TAF5Q15542 800 aa16.06■□□□□ 0.16
GPN1-212ENST00000616939 ZNF699Q32M78 642 aa16.06■□□□□ 0.16
GPN1-212ENST00000616939 N4BP2L1Q5TBK1 243 aaPredicted RBP16.06■□□□□ 0.16
GPN1-212ENST00000616939 AEBP2Q6ZN18 517 aaPredicted RBP16.06■□□□□ 0.16
GPN1-212ENST00000616939 EMC1Q8N766 993 aa16.06■□□□□ 0.16
GPN1-212ENST00000616939 PLD5Q8N7P1 536 aa16.06■□□□□ 0.16
GPN1-212ENST00000616939 TRAF3IP1Q8TDR0 691 aaPredicted RBP16.06■□□□□ 0.16
GPN1-212ENST00000616939 ATP2A3Q93084 1043 aa16.06■□□□□ 0.16
GPN1-212ENST00000616939 CPXM1Q96SM3 734 aa16.06■□□□□ 0.16
GPN1-212ENST00000616939 MTMR12Q9C0I1 747 aa16.06■□□□□ 0.16
GPN1-212ENST00000616939 XYLT2Q9H1B5 865 aa16.06■□□□□ 0.16
GPN1-212ENST00000616939 HOMER2Q9NSB8 354 aa16.06■□□□□ 0.16
GPN1-212ENST00000616939 CLIC5Q9NZA1 410 aa16.06■□□□□ 0.16
GPN1-212ENST00000616939 TJP2Q9UDY2 1190 aa16.06■□□□□ 0.16
GPN1-212ENST00000616939 STK39Q9UEW8 545 aa16.06■□□□□ 0.16
GPN1-212ENST00000616939 LOC285556D6RIA3 1793 aa16.06■□□□□ 0.16
GPN1-212ENST00000616939 GPR25O00155 361 aa16.05■□□□□ 0.16
GPN1-212ENST00000616939 DPYSL4O14531 572 aa16.05■□□□□ 0.16
GPN1-212ENST00000616939 APOL1O14791 398 aa16.05■□□□□ 0.16
GPN1-212ENST00000616939 SLC22A2O15244 555 aa16.05■□□□□ 0.16
GPN1-212ENST00000616939 GCATO75600 419 aa16.05■□□□□ 0.16
GPN1-212ENST00000616939 LYPLA1O75608 230 aaPredicted RBP16.05■□□□□ 0.16
GPN1-212ENST00000616939 ITGBL1O95965 494 aaPredicted RBP16.05■□□□□ 0.16
GPN1-212ENST00000616939 EDN1P05305 212 aa16.05■□□□□ 0.16
GPN1-212ENST00000616939 GPD1P21695 349 aa16.05■□□□□ 0.16
GPN1-212ENST00000616939 PROZP22891 400 aa16.05■□□□□ 0.16
GPN1-212ENST00000616939 ERFP50548 548 aa16.05■□□□□ 0.16
GPN1-212ENST00000616939 MMRN1Q13201 1228 aa16.05■□□□□ 0.16
GPN1-212ENST00000616939 ADGRE1Q14246 886 aa16.05■□□□□ 0.16
GPN1-212ENST00000616939 LRRC36Q1X8D7 754 aa16.05■□□□□ 0.16
GPN1-212ENST00000616939 RARS2Q5T160 578 aaKnown RBP16.05■□□□□ 0.16
GPN1-212ENST00000616939 MROH9Q5TGP6 573 aa16.05■□□□□ 0.16
GPN1-212ENST00000616939 KLHDC10Q6PID8 442 aa16.05■□□□□ 0.16
GPN1-212ENST00000616939 CPXCR1Q8N123 301 aa16.05■□□□□ 0.16
GPN1-212ENST00000616939 NGLY1Q96IV0 654 aa16.05■□□□□ 0.16
GPN1-212ENST00000616939 SERPINI1Q99574 410 aa16.05■□□□□ 0.16
GPN1-212ENST00000616939 BCO2Q9BYV7 579 aa16.05■□□□□ 0.16
GPN1-212ENST00000616939 STAU2Q9NUL3 570 aaKnown RBP eCLIP16.05■□□□□ 0.16
GPN1-212ENST00000616939 COL11A1P12107 1806 aaPredicted RBP16.05■□□□□ 0.16
GPN1-212ENST00000616939 ADCY3O60266 1144 aa16.05■□□□□ 0.16
GPN1-212ENST00000616939 FBXO21O94952 628 aa16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms