RNA–Protein interactions for RNA: ENST00000616692.1

NOP56-220, Transcript of NOP56 ribonucleoprotein, humanhuman

TSL 1 (best)

Gene NOP56, Length 2,662 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOP56-220ENST00000616692 LRRC71Q8N4P6 559 aa15.81■□□□□ 0.12
NOP56-220ENST00000616692 SLC44A1Q8WWI5 657 aa15.81■□□□□ 0.12
NOP56-220ENST00000616692 SLC47A1Q96FL8 570 aa15.81■□□□□ 0.12
NOP56-220ENST00000616692 ZNF641Q96N77 438 aaPredicted RBP15.81■□□□□ 0.12
NOP56-220ENST00000616692 SERPINB12Q96P63 405 aa15.81■□□□□ 0.12
NOP56-220ENST00000616692 PSMB7Q99436 277 aa15.81■□□□□ 0.12
NOP56-220ENST00000616692 APOL5Q9BWW9 433 aa15.81■□□□□ 0.12
NOP56-220ENST00000616692 SEMA6BQ9H3T3 888 aa15.81■□□□□ 0.12
NOP56-220ENST00000616692 IGSF9Q9P2J2 1179 aa15.81■□□□□ 0.12
NOP56-220ENST00000616692 PCDHA5Q9Y5H7 936 aa15.81■□□□□ 0.12
NOP56-220ENST00000616692 SLC12A7Q9Y666 1083 aa15.81■□□□□ 0.12
NOP56-220ENST00000616692 LINC01387J3KSC0 135 aa15.8■□□□□ 0.12
NOP56-220ENST00000616692 DNAJB5O75953 348 aa15.8■□□□□ 0.12
NOP56-220ENST00000616692 AGTP01019 485 aa15.8■□□□□ 0.12
NOP56-220ENST00000616692 MKI67P46013 3256 aaKnown RBP15.8■□□□□ 0.12
NOP56-220ENST00000616692 HCAR3P49019 387 aa15.8■□□□□ 0.12
NOP56-220ENST00000616692 NUBP1P53384 320 aa15.8■□□□□ 0.12
NOP56-220ENST00000616692 TPTEP56180 551 aa15.8■□□□□ 0.12
NOP56-220ENST00000616692 STX1BP61266 288 aa15.8■□□□□ 0.12
NOP56-220ENST00000616692 POU6F2P78424 691 aaPredicted RBP15.8■□□□□ 0.12
NOP56-220ENST00000616692 PARP14Q460N5 1801 aa15.8■□□□□ 0.12
NOP56-220ENST00000616692 HGSNATQ68CP4 663 aa15.8■□□□□ 0.12
NOP56-220ENST00000616692 BLOC1S2Q6QNY1 142 aa15.8■□□□□ 0.12
NOP56-220ENST00000616692 EMSYQ7Z589 1322 aa15.8■□□□□ 0.12
NOP56-220ENST00000616692 ACTRT1Q8TDG2 376 aa15.8■□□□□ 0.12
NOP56-220ENST00000616692 KBTBD7Q8WVZ9 684 aa15.8■□□□□ 0.12
NOP56-220ENST00000616692 DHX38Q92620 1227 aaKnown RBP15.8■□□□□ 0.12
NOP56-220ENST00000616692 HDAC2Q92769 488 aaKnown RBP15.8■□□□□ 0.12
NOP56-220ENST00000616692 RHOBTB2Q9BYZ6 727 aa15.8■□□□□ 0.12
NOP56-220ENST00000616692 GRID1Q9ULK0 1009 aa15.8■□□□□ 0.12
NOP56-220ENST00000616692 CHKBQ9Y259 395 aa15.8■□□□□ 0.12
NOP56-220ENST00000616692 hCG_1642624A0A1W2PR95 340 aa15.8■□□□□ 0.12
NOP56-220ENST00000616692 MAGEB16A2A368 324 aa15.8■□□□□ 0.12
NOP56-220ENST00000616692 TRDMT1O14717 391 aaKnown RBP15.8■□□□□ 0.12
NOP56-220ENST00000616692 SHOXO15266 292 aa15.8■□□□□ 0.12
NOP56-220ENST00000616692 RAD51CO43502 376 aa15.8■□□□□ 0.12
NOP56-220ENST00000616692 XIAPP98170 497 aa15.8■□□□□ 0.12
NOP56-220ENST00000616692 CSTF3Q12996 717 aaKnown RBP15.8■□□□□ 0.12
NOP56-220ENST00000616692 C6orf163Q5TEZ5 329 aa15.8■□□□□ 0.12
NOP56-220ENST00000616692 SLX4IPQ5VYV7 408 aa15.8■□□□□ 0.12
NOP56-220ENST00000616692 MRPL10Q7Z7H8 261 aaKnown RBP15.8■□□□□ 0.12
NOP56-220ENST00000616692 RNF180Q86T96 592 aa15.8■□□□□ 0.12
NOP56-220ENST00000616692 ADGRG5Q8IZF4 528 aa15.8■□□□□ 0.12
NOP56-220ENST00000616692 TCAIMQ8N3R3 496 aa15.8■□□□□ 0.12
NOP56-220ENST00000616692 ZNF565Q8N9K5 539 aa15.8■□□□□ 0.12
NOP56-220ENST00000616692 RHPN1Q8TCX5 695 aa15.8■□□□□ 0.12
NOP56-220ENST00000616692 SYMPKQ92797 1274 aaKnown RBP15.8■□□□□ 0.12
NOP56-220ENST00000616692 HDAC11Q96DB2 347 aa15.8■□□□□ 0.12
NOP56-220ENST00000616692 SLC39A13Q96H72 371 aa15.8■□□□□ 0.12
NOP56-220ENST00000616692 SLC29A1Q99808 456 aa15.8■□□□□ 0.12
NOP56-220ENST00000616692 COL25A1Q9BXS0 654 aaPredicted RBP15.8■□□□□ 0.12
NOP56-220ENST00000616692 DDX24Q9GZR7 859 aaKnown RBP eCLIP15.8■□□□□ 0.121e-6■□□□□ 8.8
NOP56-220ENST00000616692 KLC2Q9H0B6 622 aa15.8■□□□□ 0.12
NOP56-220ENST00000616692 KANSL2Q9H9L4 492 aa15.8■□□□□ 0.12
NOP56-220ENST00000616692 LIN28AQ9H9Z2 209 aaKnown RBP15.8■□□□□ 0.12
NOP56-220ENST00000616692 CEP72Q9P209 647 aa15.8■□□□□ 0.12
NOP56-220ENST00000616692 B3GNT3Q9Y2A9 372 aa15.8■□□□□ 0.12
NOP56-220ENST00000616692 ZNF532Q9HCE3 1301 aa15.79■□□□□ 0.12
NOP56-220ENST00000616692 MAPK13O15264 365 aa15.79■□□□□ 0.12
NOP56-220ENST00000616692 USP1O94782 785 aa15.79■□□□□ 0.12
NOP56-220ENST00000616692 CBX6O95503 412 aa15.79■□□□□ 0.12
NOP56-220ENST00000616692 POU2F1P14859 743 aa15.79■□□□□ 0.12
NOP56-220ENST00000616692 RPS6KB1P23443 525 aa15.79■□□□□ 0.12
NOP56-220ENST00000616692 SLC26A2P50443 739 aa15.79■□□□□ 0.12
NOP56-220ENST00000616692 ADCY7P51828 1080 aa15.79■□□□□ 0.12
NOP56-220ENST00000616692 ALDH18A1P54886 795 aaKnown RBP15.79■□□□□ 0.12
NOP56-220ENST00000616692 PTH1RQ03431 593 aa15.79■□□□□ 0.12
NOP56-220ENST00000616692 ZNF124Q15973 351 aa15.79■□□□□ 0.12
NOP56-220ENST00000616692 MMEL1Q495T6 779 aa15.79■□□□□ 0.12
NOP56-220ENST00000616692 AGAP7PQ5VUJ5 663 aa15.79■□□□□ 0.12
NOP56-220ENST00000616692 BNC2Q6ZN30 1099 aaPredicted RBP15.79■□□□□ 0.12
NOP56-220ENST00000616692 ZNF467Q7Z7K2 595 aaPredicted RBP15.79■□□□□ 0.12
NOP56-220ENST00000616692 SYTL1Q8IYJ3 562 aa15.79■□□□□ 0.12
NOP56-220ENST00000616692 PABPC3Q9H361 631 aaKnown RBP15.79■□□□□ 0.12
NOP56-220ENST00000616692 SPC25Q9HBM1 224 aa15.79■□□□□ 0.12
NOP56-220ENST00000616692 ASNSD1Q9NWL6 643 aa15.79■□□□□ 0.12
NOP56-220ENST00000616692 GPRC5BQ9NZH0 403 aa15.79■□□□□ 0.12
NOP56-220ENST00000616692 EDARQ9UNE0 448 aa15.79■□□□□ 0.12
NOP56-220ENST00000616692 CACNG2Q9Y698 323 aa15.79■□□□□ 0.12
NOP56-220ENST00000616692 BUD23O43709 281 aaKnown RBP15.79■□□□□ 0.12
NOP56-220ENST00000616692 ATP6V1B1P15313 513 aa15.79■□□□□ 0.12
NOP56-220ENST00000616692 CDC25AP30304 524 aa15.79■□□□□ 0.12
NOP56-220ENST00000616692 ADD2P35612 726 aa15.79■□□□□ 0.12
NOP56-220ENST00000616692 CYLC1P35663 651 aaPredicted RBP15.79■□□□□ 0.12
NOP56-220ENST00000616692 RAP1GDS1P52306 607 aa15.79■□□□□ 0.12
NOP56-220ENST00000616692 ZNF792Q3KQV3 632 aa15.79■□□□□ 0.12
NOP56-220ENST00000616692 APOA5Q6Q788 366 aa15.79■□□□□ 0.12
NOP56-220ENST00000616692 OPALINQ96PE5 141 aa15.79■□□□□ 0.12
NOP56-220ENST00000616692 MED15Q96RN5 788 aa15.79■□□□□ 0.12
NOP56-220ENST00000616692 MKRN2Q9H000 416 aaKnown RBP15.79■□□□□ 0.12
NOP56-220ENST00000616692 DPEP3Q9H4B8 488 aa15.79■□□□□ 0.12
NOP56-220ENST00000616692 CASS4Q9NQ75 786 aa15.79■□□□□ 0.12
NOP56-220ENST00000616692 POLR3EQ9NVU0 708 aa15.79■□□□□ 0.12
NOP56-220ENST00000616692 PAQR5Q9NXK6 330 aaPredicted RBP15.79■□□□□ 0.12
NOP56-220ENST00000616692 PCOLCE2Q9UKZ9 415 aa15.79■□□□□ 0.12
NOP56-220ENST00000616692 DUSP10Q9Y6W6 482 aa15.79■□□□□ 0.12
NOP56-220ENST00000616692 SYNGAP1Q96PV0 1343 aa15.78■□□□□ 0.12
NOP56-220ENST00000616692 TEX51A0A1B0GUA7 166 aa15.78■□□□□ 0.12
NOP56-220ENST00000616692 C17orf113A0A1B0GUU1 675 aa15.78■□□□□ 0.12
NOP56-220ENST00000616692 TMEM238LA0A1B0GVL6 79 aa15.78■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms