RNA–Protein interactions for RNA: ENST00000616407.1

PPP4R3B-206, Transcript of protein phosphatase 4 regulatory subunit 3B, humanhuman

TSL 1 (best) BASIC

Gene PPP4R3B, Length 4,385 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3B-206ENST00000616407 SLC12A1Q13621 1099 aa13.59□□□□□ -0.23
PPP4R3B-206ENST00000616407 SPRYD7Q5W111 196 aa13.59□□□□□ -0.23
PPP4R3B-206ENST00000616407 IL31Q6EBC2 164 aa13.59□□□□□ -0.23
PPP4R3B-206ENST00000616407 STRA8Q7Z7C7 330 aa13.59□□□□□ -0.23
PPP4R3B-206ENST00000616407 LINC00523Q86TU6 105 aa13.59□□□□□ -0.23
PPP4R3B-206ENST00000616407 BRI3BPQ8WY22 251 aa13.59□□□□□ -0.23
PPP4R3B-206ENST00000616407 SRPK1Q96SB4 655 aaKnown RBP13.59□□□□□ -0.23
PPP4R3B-206ENST00000616407 ANGPTL2Q9UKU9 493 aa13.59□□□□□ -0.23
PPP4R3B-206ENST00000616407 LOC100653049A0A140TA62 436 aa13.59□□□□□ -0.23
PPP4R3B-206ENST00000616407 CHADO15335 359 aa13.59□□□□□ -0.23
PPP4R3B-206ENST00000616407 KRT34O76011 436 aa13.59□□□□□ -0.23
PPP4R3B-206ENST00000616407 TPD52P55327 224 aaPredicted RBP13.59□□□□□ -0.23
PPP4R3B-206ENST00000616407 EFEMP1Q12805 493 aa13.59□□□□□ -0.23
PPP4R3B-206ENST00000616407 SH2D4BQ5SQS7 431 aa13.59□□□□□ -0.23
PPP4R3B-206ENST00000616407 DTX3LQ8TDB6 740 aa13.59□□□□□ -0.23
PPP4R3B-206ENST00000616407 NDRG1Q92597 394 aaKnown RBP13.59□□□□□ -0.23
PPP4R3B-206ENST00000616407 SGF29Q96ES7 293 aa13.59□□□□□ -0.23
PPP4R3B-206ENST00000616407 PGLYRP2Q96PD5 576 aa13.59□□□□□ -0.23
PPP4R3B-206ENST00000616407 LGMNQ99538 433 aa13.59□□□□□ -0.23
PPP4R3B-206ENST00000616407 SERPINI1Q99574 410 aa13.59□□□□□ -0.23
PPP4R3B-206ENST00000616407 ZNF670Q9BS34 389 aa13.59□□□□□ -0.23
PPP4R3B-206ENST00000616407 TKTL2Q9H0I9 626 aa13.59□□□□□ -0.23
PPP4R3B-206ENST00000616407 RXFP1Q9HBX9 757 aa13.59□□□□□ -0.23
PPP4R3B-206ENST00000616407 BCORQ6W2J9 1755 aa13.59□□□□□ -0.23
PPP4R3B-206ENST00000616407 HNRNPCL1O60812 293 aaKnown RBP13.59□□□□□ -0.23
PPP4R3B-206ENST00000616407 GLRA3O75311 464 aa13.59□□□□□ -0.23
PPP4R3B-206ENST00000616407 S100BP04271 92 aaPredicted RBP13.59□□□□□ -0.23
PPP4R3B-206ENST00000616407 SERPINB4P48594 390 aa13.59□□□□□ -0.23
PPP4R3B-206ENST00000616407 NSUN2Q08J23 767 aaKnown RBP eCLIP13.59□□□□□ -0.23
PPP4R3B-206ENST00000616407 MGAT5Q09328 741 aa13.59□□□□□ -0.23
PPP4R3B-206ENST00000616407 CTXN3Q4LDR2 81 aa13.59□□□□□ -0.23
PPP4R3B-206ENST00000616407 ANKRD20A2Q5SQ80 823 aa13.59□□□□□ -0.23
PPP4R3B-206ENST00000616407 ANKRD20A1Q5TYW2 823 aa13.59□□□□□ -0.23
PPP4R3B-206ENST00000616407 NSL1Q96IY1 281 aa13.59□□□□□ -0.23
PPP4R3B-206ENST00000616407 CD248Q9HCU0 757 aa13.59□□□□□ -0.23
PPP4R3B-206ENST00000616407 DMAP1Q9NPF5 467 aaPredicted RBP13.59□□□□□ -0.23
PPP4R3B-206ENST00000616407 IARS2Q9NSE4 1012 aaKnown RBP13.59□□□□□ -0.23
PPP4R3B-206ENST00000616407 CPSF2Q9P2I0 782 aaKnown RBP13.59□□□□□ -0.23
PPP4R3B-206ENST00000616407 PCDHB7Q9Y5E2 793 aa13.59□□□□□ -0.23
PPP4R3B-206ENST00000616407 SLX4Q8IY92 1834 aa13.59□□□□□ -0.23
PPP4R3B-206ENST00000616407 A0A1W2PPM1 405 aa13.58□□□□□ -0.23
PPP4R3B-206ENST00000616407 NCAM2O15394 837 aa13.58□□□□□ -0.23
PPP4R3B-206ENST00000616407 TMEM86AQ8N2M4 240 aa13.58□□□□□ -0.23
PPP4R3B-206ENST00000616407 FBXO32Q969P5 355 aa13.58□□□□□ -0.23
PPP4R3B-206ENST00000616407 PRDM12Q9H4Q4 367 aa13.58□□□□□ -0.23
PPP4R3B-206ENST00000616407 NOD2Q9HC29 1040 aa13.58□□□□□ -0.23
PPP4R3B-206ENST00000616407 VANGL2Q9ULK5 521 aa13.58□□□□□ -0.23
PPP4R3B-206ENST00000616407 ADAMTS5Q9UNA0 930 aa13.58□□□□□ -0.23
PPP4R3B-206ENST00000616407 DERAQ9Y315 318 aa13.58□□□□□ -0.23
PPP4R3B-206ENST00000616407 MAST2Q6P0Q8 1798 aa13.58□□□□□ -0.24
PPP4R3B-206ENST00000616407 C2CD2LO14523 706 aa13.58□□□□□ -0.24
PPP4R3B-206ENST00000616407 TRPA1O75762 1119 aa13.58□□□□□ -0.24
PPP4R3B-206ENST00000616407 CASP2P42575 452 aa13.58□□□□□ -0.24
PPP4R3B-206ENST00000616407 MATKP42679 507 aa13.58□□□□□ -0.24
PPP4R3B-206ENST00000616407 RPL10AP62906 217 aaKnown RBP13.58□□□□□ -0.24
PPP4R3B-206ENST00000616407 VEPH1Q14D04 833 aa13.58□□□□□ -0.24
PPP4R3B-206ENST00000616407 SH3PXD2AQ5TCZ1 1133 aa13.58□□□□□ -0.24
PPP4R3B-206ENST00000616407 GTF3C5Q9Y5Q8 519 aaPredicted RBP13.58□□□□□ -0.24
PPP4R3B-206ENST00000616407 ACTL7BQ9Y614 415 aa13.58□□□□□ -0.24
PPP4R3B-206ENST00000616407 RPLP2P05387 115 aaKnown RBP13.58□□□□□ -0.24
PPP4R3B-206ENST00000616407 GPD2P43304 727 aa13.58□□□□□ -0.24
PPP4R3B-206ENST00000616407 RAB27AP51159 221 aa13.58□□□□□ -0.24
PPP4R3B-206ENST00000616407 WNT7BP56706 349 aa13.58□□□□□ -0.24
PPP4R3B-206ENST00000616407 CUL3Q13618 768 aa13.58□□□□□ -0.24
PPP4R3B-206ENST00000616407 NOMO1Q15155 1222 aa13.58□□□□□ -0.24
PPP4R3B-206ENST00000616407 TRABD2AQ86V40 505 aa13.58□□□□□ -0.24
PPP4R3B-206ENST00000616407 PPWD1Q96BP3 646 aaKnown RBP13.58□□□□□ -0.24
PPP4R3B-206ENST00000616407 THTPAQ9BU02 230 aa13.58□□□□□ -0.24
PPP4R3B-206ENST00000616407 ACSS3Q9H6R3 686 aa13.58□□□□□ -0.24
PPP4R3B-206ENST00000616407 EPS15L1Q9UBC2 864 aa13.58□□□□□ -0.24
PPP4R3B-206ENST00000616407 AAR2Q9Y312 384 aaKnown RBP13.58□□□□□ -0.24
PPP4R3B-206ENST00000616407 A0A0A0MRY4 1105 aa13.57□□□□□ -0.24
PPP4R3B-206ENST00000616407 EIF4E1BA6NMX2 242 aaKnown RBP13.57□□□□□ -0.24
PPP4R3B-206ENST00000616407 CCR1P32246 355 aa13.57□□□□□ -0.24
PPP4R3B-206ENST00000616407 NFE2Q16621 373 aaPredicted RBP13.57□□□□□ -0.24
PPP4R3B-206ENST00000616407 NBPF20Q3BBV1 942 aa13.57□□□□□ -0.24
PPP4R3B-206ENST00000616407 CDCA2Q69YH5 1023 aaPredicted RBP13.57□□□□□ -0.24
PPP4R3B-206ENST00000616407 MFSD5Q6N075 450 aa13.57□□□□□ -0.24
PPP4R3B-206ENST00000616407 PRPF39Q86UA1 669 aaKnown RBP13.57□□□□□ -0.24
PPP4R3B-206ENST00000616407 SERBP1Q8NC51 408 aaKnown RBP eCLIP13.57□□□□□ -0.24
PPP4R3B-206ENST00000616407 PIK3R5Q8WYR1 880 aa13.57□□□□□ -0.24
PPP4R3B-206ENST00000616407 CPT1BQ92523 772 aa13.57□□□□□ -0.24
PPP4R3B-206ENST00000616407 PRCCQ92733 491 aaPredicted RBP13.57□□□□□ -0.24
PPP4R3B-206ENST00000616407 APOPT1Q96IL0 206 aa13.57□□□□□ -0.24
PPP4R3B-206ENST00000616407 LRGUKQ96M69 825 aa13.57□□□□□ -0.24
PPP4R3B-206ENST00000616407 SPATA13Q96N96 652 aa13.57□□□□□ -0.24
PPP4R3B-206ENST00000616407 DPEP3Q9H4B8 488 aa13.57□□□□□ -0.24
PPP4R3B-206ENST00000616407 GPBP1L1Q9HC44 474 aaPredicted RBP13.57□□□□□ -0.24
PPP4R3B-206ENST00000616407 SLCO1B3Q9NPD5 702 aa13.57□□□□□ -0.24
PPP4R3B-206ENST00000616407 FAM105AQ9NUU6 356 aa13.57□□□□□ -0.24
PPP4R3B-206ENST00000616407 RBM22Q9NW64 420 aaKnown RBP eCLIP13.57□□□□□ -0.24
PPP4R3B-206ENST00000616407 HACD1B0YJ81 288 aa13.57□□□□□ -0.24
PPP4R3B-206ENST00000616407 SLC2A3P11169 496 aa13.57□□□□□ -0.24
PPP4R3B-206ENST00000616407 CREB1P16220 341 aa13.57□□□□□ -0.24
PPP4R3B-206ENST00000616407 GBE1Q04446 702 aa13.57□□□□□ -0.24
PPP4R3B-206ENST00000616407 KIF19Q2TAC6 998 aa13.57□□□□□ -0.24
PPP4R3B-206ENST00000616407 PLD5Q8N7P1 536 aa13.57□□□□□ -0.24
PPP4R3B-206ENST00000616407 APBA2Q99767 749 aa13.57□□□□□ -0.24
PPP4R3B-206ENST00000616407 SHCBP1LQ9BZQ2 653 aa13.57□□□□□ -0.24
PPP4R3B-206ENST00000616407 RRN3Q9NYV6 651 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms