RNA–Protein interactions for RNA: ENST00000616247.4

LMO3-235, Transcript of LIM domain only 3, humanhuman

TSL 5 BASIC

Gene LMO3, Length 3,227 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-235ENST00000616247 GRIA1P42261 906 aa6.88□□□□□ -1.31
LMO3-235ENST00000616247 MNX1P50219 401 aaPredicted RBP6.88□□□□□ -1.31
LMO3-235ENST00000616247 THOP1P52888 689 aa6.88□□□□□ -1.31
LMO3-235ENST00000616247 WNT7BP56706 349 aa6.88□□□□□ -1.31
LMO3-235ENST00000616247 CDKL1Q00532 357 aa6.88□□□□□ -1.31
LMO3-235ENST00000616247 ZNF252P-AS1Q0IIN9 211 aa6.88□□□□□ -1.31
LMO3-235ENST00000616247 FSTL1Q12841 308 aa6.88□□□□□ -1.31
LMO3-235ENST00000616247 HNRNPDQ14103 355 aaKnown RBP6.88□□□□□ -1.31
LMO3-235ENST00000616247 C1QTNF12Q5T7M4 302 aa6.88□□□□□ -1.31
LMO3-235ENST00000616247 MFSD4BQ5TF39 518 aa6.88□□□□□ -1.31
LMO3-235ENST00000616247 SCARA3Q6AZY7 606 aa6.88□□□□□ -1.31
LMO3-235ENST00000616247 PPP1R2P3Q6NXS1 205 aa6.88□□□□□ -1.31
LMO3-235ENST00000616247 POTEAQ6S8J7 498 aa6.88□□□□□ -1.31
LMO3-235ENST00000616247 XKR5Q6UX68 686 aa6.88□□□□□ -1.31
LMO3-235ENST00000616247 CDR2LQ86X02 465 aaPredicted RBP6.88□□□□□ -1.31
LMO3-235ENST00000616247 PCDH20Q8N6Y1 951 aaKnown RBP6.88□□□□□ -1.31
LMO3-235ENST00000616247 TMC2Q8TDI7 906 aa6.88□□□□□ -1.31
LMO3-235ENST00000616247 RCN3Q96D15 328 aa6.88□□□□□ -1.31
LMO3-235ENST00000616247 FAM163AQ96GL9 167 aaPredicted RBP6.88□□□□□ -1.31
LMO3-235ENST00000616247 BTBD9Q96Q07 612 aa6.88□□□□□ -1.31
LMO3-235ENST00000616247 PKP2Q99959 881 aa6.88□□□□□ -1.31
LMO3-235ENST00000616247 XPO5Q9HAV4 1204 aaKnown RBP eCLIP6.88□□□□□ -1.31
LMO3-235ENST00000616247 TIMMDC1Q9NPL8 285 aa6.88□□□□□ -1.31
LMO3-235ENST00000616247 TELO2Q9Y4R8 837 aa6.88□□□□□ -1.31
LMO3-235ENST00000616247 GAKO14976 1311 aa6.87□□□□□ -1.31
LMO3-235ENST00000616247 K7ERI5 159 aa6.87□□□□□ -1.31
LMO3-235ENST00000616247 NFIBO00712 420 aa6.87□□□□□ -1.31
LMO3-235ENST00000616247 TPP1O14773 563 aa6.87□□□□□ -1.31
LMO3-235ENST00000616247 RFPL1O75677 317 aa6.87□□□□□ -1.31
LMO3-235ENST00000616247 APOEP02649 317 aa6.87□□□□□ -1.31
LMO3-235ENST00000616247 AOC1P19801 751 aa6.87□□□□□ -1.31
LMO3-235ENST00000616247 EEF1B2P24534 225 aaKnown RBP6.87□□□□□ -1.31
LMO3-235ENST00000616247 MIPP30301 263 aa6.87□□□□□ -1.31
LMO3-235ENST00000616247 NOVP48745 357 aa6.87□□□□□ -1.31
LMO3-235ENST00000616247 EIF2B2P49770 351 aaKnown RBP6.87□□□□□ -1.31
LMO3-235ENST00000616247 GTF2A2P52657 109 aa6.87□□□□□ -1.31
LMO3-235ENST00000616247 YWHAZP63104 245 aaKnown RBP6.87□□□□□ -1.31
LMO3-235ENST00000616247 PLOD1Q02809 727 aaPredicted RBP6.87□□□□□ -1.31
LMO3-235ENST00000616247 KLF10Q13118 480 aa6.87□□□□□ -1.31
LMO3-235ENST00000616247 FAM102AQ5T9C2 384 aaPredicted RBP6.87□□□□□ -1.31
LMO3-235ENST00000616247 OR6B2Q6IFH4 312 aa6.87□□□□□ -1.31
LMO3-235ENST00000616247 SWSAP1Q6NVH7 229 aa6.87□□□□□ -1.31
LMO3-235ENST00000616247 NCCRP1Q6ZVX7 275 aaPredicted RBP6.87□□□□□ -1.31
LMO3-235ENST00000616247 CMC1Q7Z7K0 106 aa6.87□□□□□ -1.31
LMO3-235ENST00000616247 AMIGO3Q86WK7 504 aa6.87□□□□□ -1.31
LMO3-235ENST00000616247 SIAH1Q8IUQ4 282 aa6.87□□□□□ -1.31
LMO3-235ENST00000616247 MPP5Q8N3R9 675 aa6.87□□□□□ -1.31
LMO3-235ENST00000616247 LARGE2Q8N3Y3 721 aa6.87□□□□□ -1.31
LMO3-235ENST00000616247 CHURC1Q8WUH1 139 aa6.87□□□□□ -1.31
LMO3-235ENST00000616247 OXCT2Q9BYC2 517 aaPredicted RBP6.87□□□□□ -1.31
LMO3-235ENST00000616247 CIDEBQ9UHD4 219 aa6.87□□□□□ -1.31
LMO3-235ENST00000616247 SCAF8Q9UPN6 1271 aaKnown RBP6.87□□□□□ -1.31
LMO3-235ENST00000616247 COQ4Q9Y3A0 265 aa6.87□□□□□ -1.31
LMO3-235ENST00000616247 GMEB1Q9Y692 573 aa6.87□□□□□ -1.31
LMO3-235ENST00000616247 J3QRK9 145 aa6.87□□□□□ -1.31
LMO3-235ENST00000616247 PRPSAP2O60256 369 aa6.87□□□□□ -1.31
LMO3-235ENST00000616247 CCNT2O60583 730 aaKnown RBP6.87□□□□□ -1.31
LMO3-235ENST00000616247 NOL3O60936 208 aaKnown RBP6.87□□□□□ -1.31
LMO3-235ENST00000616247 LRCH4O75427 683 aa6.87□□□□□ -1.31
LMO3-235ENST00000616247 RPS6KA4O75676 772 aa6.87□□□□□ -1.31
LMO3-235ENST00000616247 IL1R1P14778 569 aa6.87□□□□□ -1.31
LMO3-235ENST00000616247 CD1EP15812 388 aa6.87□□□□□ -1.31
LMO3-235ENST00000616247 ZFXP17010 805 aaPredicted RBP6.87□□□□□ -1.31
LMO3-235ENST00000616247 CDH2P19022 906 aaPredicted RBP6.87□□□□□ -1.31
LMO3-235ENST00000616247 TFE3P19532 575 aaPredicted RBP6.87□□□□□ -1.31
LMO3-235ENST00000616247 EIF4BP23588 611 aaKnown RBP6.87□□□□□ -1.31
LMO3-235ENST00000616247 RAP1GAPP47736 663 aa6.87□□□□□ -1.31
LMO3-235ENST00000616247 MYL6P60660 151 aa6.87□□□□□ -1.31
LMO3-235ENST00000616247 JAG1P78504 1218 aa6.87□□□□□ -1.31
LMO3-235ENST00000616247 SH3PXD2AQ5TCZ1 1133 aa6.87□□□□□ -1.31
LMO3-235ENST00000616247 ANGEL2Q5VTE6 544 aaKnown RBP6.87□□□□□ -1.31
LMO3-235ENST00000616247 TMEM198Q66K66 360 aa6.87□□□□□ -1.31
LMO3-235ENST00000616247 SLC39A4Q6P5W5 647 aa6.87□□□□□ -1.31
LMO3-235ENST00000616247 UNC5AQ6ZN44 842 aa6.87□□□□□ -1.31
LMO3-235ENST00000616247 FAM196AQ6ZSG2 479 aa6.87□□□□□ -1.31
LMO3-235ENST00000616247 BBS12Q6ZW61 710 aa6.87□□□□□ -1.31
LMO3-235ENST00000616247 GPR141Q7Z602 305 aa6.87□□□□□ -1.31
LMO3-235ENST00000616247 ZNF410Q86VK4 478 aa6.87□□□□□ -1.31
LMO3-235ENST00000616247 PHF13Q86YI8 300 aaPredicted RBP6.87□□□□□ -1.31
LMO3-235ENST00000616247 CPNE9Q8IYJ1 553 aa6.87□□□□□ -1.31
LMO3-235ENST00000616247 NUP93Q8N1F7 819 aa6.87□□□□□ -1.31
LMO3-235ENST00000616247 CCNYL1Q8N7R7 359 aa6.87□□□□□ -1.31
LMO3-235ENST00000616247 KYQ8NBH2 561 aa6.87□□□□□ -1.31
LMO3-235ENST00000616247 ACTRT2Q8TDY3 377 aa6.87□□□□□ -1.31
LMO3-235ENST00000616247 CDKL2Q92772 493 aa6.87□□□□□ -1.31
LMO3-235ENST00000616247 ATP6V1E2Q96A05 226 aa6.87□□□□□ -1.31
LMO3-235ENST00000616247 FBXL8Q96CD0 374 aa6.87□□□□□ -1.31
LMO3-235ENST00000616247 RIT2Q99578 217 aa6.87□□□□□ -1.31
LMO3-235ENST00000616247 CIB1Q99828 191 aa6.87□□□□□ -1.31
LMO3-235ENST00000616247 POLR3FQ9H1D9 316 aaPredicted RBP6.87□□□□□ -1.31
LMO3-235ENST00000616247 COG4Q9H9E3 785 aa6.87□□□□□ -1.31
LMO3-235ENST00000616247 TRNAU1APQ9NX07 287 aaKnown RBP6.87□□□□□ -1.31
LMO3-235ENST00000616247 SIRPGQ9P1W8 387 aa6.87□□□□□ -1.31
LMO3-235ENST00000616247 CNTN3Q9P232 1028 aa6.87□□□□□ -1.31
LMO3-235ENST00000616247 EPS15L1Q9UBC2 864 aa6.87□□□□□ -1.31
LMO3-235ENST00000616247 BCAP29Q9UHQ4 241 aa6.87□□□□□ -1.31
LMO3-235ENST00000616247 BARX2Q9UMQ3 279 aaPredicted RBP6.87□□□□□ -1.31
LMO3-235ENST00000616247 POLIQ9UNA4 740 aa6.87□□□□□ -1.31
LMO3-235ENST00000616247 AURKCQ9UQB9 309 aa6.87□□□□□ -1.31
LMO3-235ENST00000616247 WDR27A2RRH5 827 aa6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms