RNA–Protein interactions for RNA: ENST00000615459.4

RSPO1-204, Transcript of R-spondin 1, humanhuman

TSL 2 BASIC

Gene RSPO1, Length 2,331 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO1-204ENST00000615459 LLGL1Q15334 1064 aa16.3■□□□□ 0.2
RSPO1-204ENST00000615459 SIX1Q15475 284 aaPredicted RBP16.3■□□□□ 0.2
RSPO1-204ENST00000615459 SMAD2Q15796 467 aaKnown RBP16.3■□□□□ 0.2
RSPO1-204ENST00000615459 CYP1B1Q16678 543 aa16.3■□□□□ 0.2
RSPO1-204ENST00000615459 HIBCHQ6NVY1 386 aaPredicted RBP16.3■□□□□ 0.2
RSPO1-204ENST00000615459 GRASPQ7Z6J2 395 aaPredicted RBP16.3■□□□□ 0.2
RSPO1-204ENST00000615459 ACOT1Q86TX2 421 aa16.3■□□□□ 0.2
RSPO1-204ENST00000615459 NOP9Q86U38 636 aaKnown RBP16.3■□□□□ 0.2
RSPO1-204ENST00000615459 TAX1BP1Q86VP1 789 aa16.3■□□□□ 0.2
RSPO1-204ENST00000615459 CCDC50Q8IVM0 306 aa16.3■□□□□ 0.2
RSPO1-204ENST00000615459 STKLD1Q8NE28 680 aa16.3■□□□□ 0.2
RSPO1-204ENST00000615459 EPS8L1Q8TE68 723 aa16.3■□□□□ 0.2
RSPO1-204ENST00000615459 SUSD6Q92537 303 aa16.3■□□□□ 0.2
RSPO1-204ENST00000615459 TMEM109Q9BVC6 243 aa16.3■□□□□ 0.2
RSPO1-204ENST00000615459 SAMD15Q9P1V8 674 aa16.3■□□□□ 0.2
RSPO1-204ENST00000615459 CDH9Q9ULB4 789 aa16.3■□□□□ 0.2
RSPO1-204ENST00000615459 LRG1P02750 347 aa16.29■□□□□ 0.2
RSPO1-204ENST00000615459 RARAP10276 462 aa16.29■□□□□ 0.2
RSPO1-204ENST00000615459 PTPN1P18031 435 aaKnown RBP16.29■□□□□ 0.2
RSPO1-204ENST00000615459 CETN1Q12798 172 aa16.29■□□□□ 0.2
RSPO1-204ENST00000615459 SLMAPQ14BN4 828 aa16.29■□□□□ 0.2
RSPO1-204ENST00000615459 CNGA2Q16280 664 aa16.29■□□□□ 0.2
RSPO1-204ENST00000615459 SLC13A5Q86YT5 568 aaPredicted RBP16.29■□□□□ 0.2
RSPO1-204ENST00000615459 SPATA18Q8TC71 538 aa16.29■□□□□ 0.2
RSPO1-204ENST00000615459 MYLPFQ96A32 169 aa16.29■□□□□ 0.2
RSPO1-204ENST00000615459 DDX23Q9BUQ8 820 aaKnown RBP16.29■□□□□ 0.2
RSPO1-204ENST00000615459 ABCF3Q9NUQ8 709 aa16.29■□□□□ 0.2
RSPO1-204ENST00000615459 NOCTQ9UK39 431 aaKnown RBP16.29■□□□□ 0.2
RSPO1-204ENST00000615459 YIPF1Q9Y548 306 aa16.29■□□□□ 0.2
RSPO1-204ENST00000615459 GPR15P49685 360 aa16.29■□□□□ 0.2
RSPO1-204ENST00000615459 LONRF1Q17RB8 773 aa16.29■□□□□ 0.2
RSPO1-204ENST00000615459 FAM133BQ5BKY9 247 aaKnown RBP16.29■□□□□ 0.2
RSPO1-204ENST00000615459 TJAP1Q5JTD0 557 aa16.29■□□□□ 0.2
RSPO1-204ENST00000615459 SDHAF4Q5VUM1 108 aa16.29■□□□□ 0.2
RSPO1-204ENST00000615459 FAM171BQ6P995 826 aa16.29■□□□□ 0.2
RSPO1-204ENST00000615459 B3GALNT2Q8NCR0 500 aa16.29■□□□□ 0.2
RSPO1-204ENST00000615459 GIMAP7Q8NHV1 300 aa16.29■□□□□ 0.2
RSPO1-204ENST00000615459 MAGEC3Q8TD91 643 aa16.29■□□□□ 0.2
RSPO1-204ENST00000615459 PCED1BQ96HM7 432 aa16.29■□□□□ 0.2
RSPO1-204ENST00000615459 EPB41L3Q9Y2J2 1087 aaPredicted RBP16.29■□□□□ 0.2
RSPO1-204ENST00000615459 PCDHB5Q9Y5E4 795 aa16.29■□□□□ 0.2
RSPO1-204ENST00000615459 DOCK6Q96HP0 2047 aa16.28■□□□□ 0.2
RSPO1-204ENST00000615459 CLDN5O00501 218 aa16.28■□□□□ 0.2
RSPO1-204ENST00000615459 SPOPO43791 374 aa16.28■□□□□ 0.2
RSPO1-204ENST00000615459 ATP6V1G2O95670 118 aa16.28■□□□□ 0.2
RSPO1-204ENST00000615459 LRRC14Q15048 493 aa16.28■□□□□ 0.2
RSPO1-204ENST00000615459 TRPM8Q7Z2W7 1104 aa16.28■□□□□ 0.2
RSPO1-204ENST00000615459 EXOC3L1Q86VI1 746 aa16.28■□□□□ 0.2
RSPO1-204ENST00000615459 SLC47A2Q86VL8 602 aa16.28■□□□□ 0.2
RSPO1-204ENST00000615459 SPATA2LQ8IUW3 424 aaPredicted RBP16.28■□□□□ 0.2
RSPO1-204ENST00000615459 PPM1KQ8N3J5 372 aa16.28■□□□□ 0.2
RSPO1-204ENST00000615459 C12orf29Q8N999 325 aa16.28■□□□□ 0.2
RSPO1-204ENST00000615459 CMASQ8NFW8 434 aaPredicted RBP16.28■□□□□ 0.2
RSPO1-204ENST00000615459 ZNF564Q8TBZ8 553 aaPredicted RBP16.28■□□□□ 0.2
RSPO1-204ENST00000615459 NUP85Q9BW27 656 aa16.28■□□□□ 0.2
RSPO1-204ENST00000615459 CISHQ9NSE2 258 aa16.28■□□□□ 0.2
RSPO1-204ENST00000615459 PMM2O15305 246 aa16.28■□□□□ 0.2
RSPO1-204ENST00000615459 TP73O15350 636 aa16.28■□□□□ 0.2
RSPO1-204ENST00000615459 MTA2O94776 668 aa16.28■□□□□ 0.2
RSPO1-204ENST00000615459 GSTA1P08263 222 aa16.28■□□□□ 0.2
RSPO1-204ENST00000615459 HNRNPA1P09651 372 aaKnown RBP eCLIP16.28■□□□□ 0.2
RSPO1-204ENST00000615459 BDNFP23560 247 aa16.28■□□□□ 0.2
RSPO1-204ENST00000615459 CUL2Q13617 745 aa16.28■□□□□ 0.2
RSPO1-204ENST00000615459 NFE2Q16621 373 aaPredicted RBP16.28■□□□□ 0.2
RSPO1-204ENST00000615459 DDR2Q16832 855 aa16.28■□□□□ 0.2
RSPO1-204ENST00000615459 CROCCP2Q86T23 111 aa16.28■□□□□ 0.2
RSPO1-204ENST00000615459 MGARPQ8TDB4 240 aa16.28■□□□□ 0.2
RSPO1-204ENST00000615459 GIPC2Q8TF65 315 aa16.28■□□□□ 0.2
RSPO1-204ENST00000615459 RIPOR3Q96MK2 946 aa16.28■□□□□ 0.2
RSPO1-204ENST00000615459 NT5C1BQ96P26 610 aa16.28■□□□□ 0.2
RSPO1-204ENST00000615459 CDC42EP4Q9H3Q1 356 aaKnown RBP16.28■□□□□ 0.2
RSPO1-204ENST00000615459 CYP3A43Q9HB55 503 aa16.28■□□□□ 0.2
RSPO1-204ENST00000615459 DNMT3BQ9UBC3 853 aaKnown RBP16.28■□□□□ 0.2
RSPO1-204ENST00000615459 GGT7Q9UJ14 662 aa16.28■□□□□ 0.2
RSPO1-204ENST00000615459 MTCL1Q9Y4B5 1905 aaKnown RBP16.27■□□□□ 0.2
RSPO1-204ENST00000615459 P4HA2O15460 535 aa16.27■□□□□ 0.2
RSPO1-204ENST00000615459 CYP26A1O43174 497 aa16.27■□□□□ 0.2
RSPO1-204ENST00000615459 ACSL3O95573 720 aa16.27■□□□□ 0.2
RSPO1-204ENST00000615459 FAM163BP0C2L3 166 aa16.27■□□□□ 0.2
RSPO1-204ENST00000615459 CREB1P16220 341 aa16.27■□□□□ 0.2
RSPO1-204ENST00000615459 ALDH1A3P47895 512 aa16.27■□□□□ 0.2
RSPO1-204ENST00000615459 PUS10Q3MIT2 529 aaKnown RBP16.27■□□□□ 0.2
RSPO1-204ENST00000615459 CCDC63Q8NA47 563 aa16.27■□□□□ 0.2
RSPO1-204ENST00000615459 SPPL2BQ8TCT7 592 aa16.27■□□□□ 0.2
RSPO1-204ENST00000615459 KREMEN1Q96MU8 473 aa16.27■□□□□ 0.2
RSPO1-204ENST00000615459 CORO1BQ9BR76 489 aa16.27■□□□□ 0.2
RSPO1-204ENST00000615459 TACO1Q9BSH4 297 aaKnown RBP16.27■□□□□ 0.2
RSPO1-204ENST00000615459 STMN4Q9H169 189 aaPredicted RBP16.27■□□□□ 0.2
RSPO1-204ENST00000615459 NOD2Q9HC29 1040 aa16.27■□□□□ 0.2
RSPO1-204ENST00000615459 FAM49BQ9NUQ9 324 aa16.27■□□□□ 0.2
RSPO1-204ENST00000615459 NCOR1O75376 2440 aa16.27■□□□□ 0.19
RSPO1-204ENST00000615459 XYLBO75191 536 aa16.27■□□□□ 0.19
RSPO1-204ENST00000615459 ATF6P18850 670 aa16.27■□□□□ 0.19
RSPO1-204ENST00000615459 HOXA9P31269 272 aa16.27■□□□□ 0.19
RSPO1-204ENST00000615459 MTHFRP42898 656 aa16.27■□□□□ 0.19
RSPO1-204ENST00000615459 INCA1Q0VD86 236 aa16.27■□□□□ 0.19
RSPO1-204ENST00000615459 TAOK1Q7L7X3 1001 aa16.27■□□□□ 0.19
RSPO1-204ENST00000615459 SCN4BQ8IWT1 228 aa16.27■□□□□ 0.19
RSPO1-204ENST00000615459 HS6ST3Q8IZP7 471 aa16.27■□□□□ 0.19
RSPO1-204ENST00000615459 ST13P5Q8NFI4 369 aaPredicted RBP16.27■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 113.9 ms