RNA–Protein interactions for RNA: ENST00000615230.4

TNFRSF9-204, Transcript of TNF receptor superfamily member 9, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TNFRSF9, Length 5,970 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF9-204ENST00000615230 SLC22A9Q8IVM8 553 aa10.02□□□□□ -0.81
TNFRSF9-204ENST00000615230 BRI3BPQ8WY22 251 aa10.02□□□□□ -0.81
TNFRSF9-204ENST00000615230 SPDL1Q96EA4 605 aa10.02□□□□□ -0.81
TNFRSF9-204ENST00000615230 PITPNM3Q9BZ71 974 aa10.02□□□□□ -0.81
TNFRSF9-204ENST00000615230 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP10.02□□□□□ -0.81
TNFRSF9-204ENST00000615230 ZNF112Q9UJU3 913 aa10.02□□□□□ -0.81
TNFRSF9-204ENST00000615230 RNF112Q9ULX5 631 aa10.02□□□□□ -0.81
TNFRSF9-204ENST00000615230 MAFBQ9Y5Q3 323 aaPredicted RBP10.02□□□□□ -0.81
TNFRSF9-204ENST00000615230 PRR23AA6NEV1 266 aa10.02□□□□□ -0.81
TNFRSF9-204ENST00000615230 ANGPT2O15123 496 aa10.02□□□□□ -0.81
TNFRSF9-204ENST00000615230 CFLARO15519 480 aa10.02□□□□□ -0.81
TNFRSF9-204ENST00000615230 PFKPQ01813 784 aa10.02□□□□□ -0.81
TNFRSF9-204ENST00000615230 NCAPHQ15003 741 aa10.02□□□□□ -0.81
TNFRSF9-204ENST00000615230 MFSD4BQ5TF39 518 aa10.02□□□□□ -0.81
TNFRSF9-204ENST00000615230 SPOCD1Q6ZMY3 1216 aa10.02□□□□□ -0.81
TNFRSF9-204ENST00000615230 KDELC2Q7Z4H8 507 aa10.02□□□□□ -0.81
TNFRSF9-204ENST00000615230 ANKRD52Q8NB46 1076 aa10.02□□□□□ -0.81
TNFRSF9-204ENST00000615230 B3GALNT2Q8NCR0 500 aa10.02□□□□□ -0.81
TNFRSF9-204ENST00000615230 TAS1R2Q8TE23 839 aa10.02□□□□□ -0.81
TNFRSF9-204ENST00000615230 WNT8BQ93098 351 aa10.02□□□□□ -0.81
TNFRSF9-204ENST00000615230 QRFPRQ96P65 431 aa10.02□□□□□ -0.81
TNFRSF9-204ENST00000615230 DNAJC7Q99615 494 aa10.02□□□□□ -0.81
TNFRSF9-204ENST00000615230 FICDQ9BVA6 458 aa10.02□□□□□ -0.81
TNFRSF9-204ENST00000615230 ZYG11BQ9C0D3 744 aa10.02□□□□□ -0.81
TNFRSF9-204ENST00000615230 TASP1Q9H6P5 420 aa10.02□□□□□ -0.81
TNFRSF9-204ENST00000615230 NIPSNAP3AQ9UFN0 247 aaPredicted RBP10.02□□□□□ -0.81
TNFRSF9-204ENST00000615230 DDHD2O94830 711 aa10.02□□□□□ -0.81
TNFRSF9-204ENST00000615230 MYBL2P10244 700 aa10.02□□□□□ -0.81
TNFRSF9-204ENST00000615230 MAD2L1Q13257 205 aaPredicted RBP10.02□□□□□ -0.81
TNFRSF9-204ENST00000615230 SPDYAQ5MJ70 313 aa10.02□□□□□ -0.81
TNFRSF9-204ENST00000615230 HYIQ5T013 277 aa10.02□□□□□ -0.81
TNFRSF9-204ENST00000615230 PNMA5Q96PV4 448 aa10.02□□□□□ -0.81
TNFRSF9-204ENST00000615230 APOL5Q9BWW9 433 aa10.02□□□□□ -0.81
TNFRSF9-204ENST00000615230 INTS7Q9NVH2 962 aaKnown RBP10.02□□□□□ -0.81
TNFRSF9-204ENST00000615230 GPN3Q9UHW5 284 aaPredicted RBP10.02□□□□□ -0.81
TNFRSF9-204ENST00000615230 PYCARDQ9ULZ3 195 aa10.02□□□□□ -0.81
TNFRSF9-204ENST00000615230 ANKRD6Q9Y2G4 727 aa10.02□□□□□ -0.81
TNFRSF9-204ENST00000615230 GCATO75600 419 aa10.01□□□□□ -0.81
TNFRSF9-204ENST00000615230 MPOP05164 745 aa10.01□□□□□ -0.81
TNFRSF9-204ENST00000615230 FMR1Q06787 632 aaKnown RBP eCLIP10.01□□□□□ -0.81
TNFRSF9-204ENST00000615230 ELP6Q0PNE2 266 aa10.01□□□□□ -0.81
TNFRSF9-204ENST00000615230 CDH17Q12864 832 aa10.01□□□□□ -0.81
TNFRSF9-204ENST00000615230 MAPK8IP2Q13387 824 aaPredicted RBP10.01□□□□□ -0.81
TNFRSF9-204ENST00000615230 KBTBD12Q3ZCT8 623 aa10.01□□□□□ -0.81
TNFRSF9-204ENST00000615230 HSP90AA5PQ58FG0 334 aa10.01□□□□□ -0.81
TNFRSF9-204ENST00000615230 LPCAT1Q8NF37 534 aa10.01□□□□□ -0.81
TNFRSF9-204ENST00000615230 COG1Q8WTW3 980 aa10.01□□□□□ -0.81
TNFRSF9-204ENST00000615230 POP1Q99575 1024 aaKnown RBP10.01□□□□□ -0.81
TNFRSF9-204ENST00000615230 RBBP8Q99708 897 aa10.01□□□□□ -0.81
TNFRSF9-204ENST00000615230 NT5MQ9NPB1 228 aa10.01□□□□□ -0.81
TNFRSF9-204ENST00000615230 CDYLQ9Y232 598 aa10.01□□□□□ -0.81
TNFRSF9-204ENST00000615230 CCDC78A2IDD5 438 aa10.01□□□□□ -0.81
TNFRSF9-204ENST00000615230 TBC1D4O60343 1298 aa10.01□□□□□ -0.81
TNFRSF9-204ENST00000615230 ATP1A2P50993 1020 aa10.01□□□□□ -0.81
TNFRSF9-204ENST00000615230 SERPINA13PQ6UXR4 307 aa10.01□□□□□ -0.81
TNFRSF9-204ENST00000615230 MON1AQ86VX9 555 aa10.01□□□□□ -0.81
TNFRSF9-204ENST00000615230 ADAM28Q9UKQ2 775 aa10.01□□□□□ -0.81
TNFRSF9-204ENST00000615230 ALG6Q9Y672 507 aa10.01□□□□□ -0.81
TNFRSF9-204ENST00000615230 URADA6NGE7 173 aa10.01□□□□□ -0.81
TNFRSF9-204ENST00000615230 F5H423 210 aaPredicted RBP10.01□□□□□ -0.81
TNFRSF9-204ENST00000615230 CACNB4O00305 520 aaPredicted RBP10.01□□□□□ -0.81
TNFRSF9-204ENST00000615230 GNSP15586 552 aa10.01□□□□□ -0.81
TNFRSF9-204ENST00000615230 SLCO1A2P46721 670 aa10.01□□□□□ -0.81
TNFRSF9-204ENST00000615230 GAD2Q05329 585 aa10.01□□□□□ -0.81
TNFRSF9-204ENST00000615230 IFT88Q13099 833 aa10.01□□□□□ -0.81
TNFRSF9-204ENST00000615230 PDCD2Q16342 344 aaPredicted RBP10.01□□□□□ -0.81
TNFRSF9-204ENST00000615230 COBLL1Q53SF7 1204 aa10.01□□□□□ -0.81
TNFRSF9-204ENST00000615230 SPANXN3Q5MJ09 141 aa10.01□□□□□ -0.81
TNFRSF9-204ENST00000615230 WSCD1Q658N2 575 aa10.01□□□□□ -0.81
TNFRSF9-204ENST00000615230 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.01□□□□□ -0.81
TNFRSF9-204ENST00000615230 GET4Q7L5D6 327 aaPredicted RBP10.01□□□□□ -0.81
TNFRSF9-204ENST00000615230 STX19Q8N4C7 294 aa10.01□□□□□ -0.81
TNFRSF9-204ENST00000615230 CMTM5Q96DZ9 223 aa10.01□□□□□ -0.81
TNFRSF9-204ENST00000615230 TCF25Q9BQ70 676 aa10.01□□□□□ -0.81
TNFRSF9-204ENST00000615230 CNGB3Q9NQW8 809 aa10.01□□□□□ -0.81
TNFRSF9-204ENST00000615230 SAE1Q9UBE0 346 aaPredicted RBP10.01□□□□□ -0.81
TNFRSF9-204ENST00000615230 DOT1LQ8TEK3 1739 aa10.01□□□□□ -0.81
TNFRSF9-204ENST00000615230 BAG2O95816 211 aa10.01□□□□□ -0.81
TNFRSF9-204ENST00000615230 ASLP04424 464 aa10.01□□□□□ -0.81
TNFRSF9-204ENST00000615230 CDH2P19022 906 aaPredicted RBP10.01□□□□□ -0.81
TNFRSF9-204ENST00000615230 MMP13P45452 471 aa10.01□□□□□ -0.81
TNFRSF9-204ENST00000615230 TOB1P50616 345 aaPredicted RBP10.01□□□□□ -0.81
TNFRSF9-204ENST00000615230 VCPP55072 806 aaKnown RBP10.01□□□□□ -0.81
TNFRSF9-204ENST00000615230 GPR158Q5T848 1215 aa10.01□□□□□ -0.81
TNFRSF9-204ENST00000615230 PRPF39Q86UA1 669 aaKnown RBP10.01□□□□□ -0.81
TNFRSF9-204ENST00000615230 TIFAQ96CG3 184 aa10.01□□□□□ -0.81
TNFRSF9-204ENST00000615230 PGLYRP2Q96PD5 576 aa10.01□□□□□ -0.81
TNFRSF9-204ENST00000615230 TBL1YQ9BQ87 522 aa10.01□□□□□ -0.81
TNFRSF9-204ENST00000615230 RGS18Q9NS28 235 aa10.01□□□□□ -0.81
TNFRSF9-204ENST00000615230 GID8Q9NWU2 228 aa10.01□□□□□ -0.81
TNFRSF9-204ENST00000615230 FAM153AQ9UHL3 310 aa10.01□□□□□ -0.81
TNFRSF9-204ENST00000615230 ERVW-1Q9UQF0 538 aa10.01□□□□□ -0.81
TNFRSF9-204ENST00000615230 TSPAN3O60637 253 aa10.01□□□□□ -0.81
TNFRSF9-204ENST00000615230 COILP38432 576 aaPredicted RBP10.01□□□□□ -0.81
TNFRSF9-204ENST00000615230 CYP2A13Q16696 494 aa10.01□□□□□ -0.81
TNFRSF9-204ENST00000615230 TDRD5Q8NAT2 981 aaKnown RBP10.01□□□□□ -0.81
TNFRSF9-204ENST00000615230 C3orf20Q8ND61 904 aa10.01□□□□□ -0.81
TNFRSF9-204ENST00000615230 TPCN2Q8NHX9 752 aa10.01□□□□□ -0.81
TNFRSF9-204ENST00000615230 RBM15Q96T37 977 aaKnown RBP eCLIP10.01□□□□□ -0.81
TNFRSF9-204ENST00000615230 PADI3Q9ULW8 664 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms