RNA–Protein interactions for RNA: ENST00000614944.4

VPS11-206, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 2 BASIC

Gene VPS11, Length 3,388 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-206ENST00000614944 HSPA14Q0VDF9 509 aa9.12□□□□□ -0.95
VPS11-206ENST00000614944 TRPC3Q13507 836 aa9.12□□□□□ -0.95
VPS11-206ENST00000614944 MTF1Q14872 753 aa9.12□□□□□ -0.95
VPS11-206ENST00000614944 KPNB1Q14974 876 aaKnown RBP9.12□□□□□ -0.95
VPS11-206ENST00000614944 PCGF5Q86SE9 256 aa9.12□□□□□ -0.95
VPS11-206ENST00000614944 TMEM192Q8IY95 271 aa9.12□□□□□ -0.95
VPS11-206ENST00000614944 VCPIP1Q96JH7 1222 aa9.12□□□□□ -0.95
VPS11-206ENST00000614944 ZNF560Q96MR9 790 aa9.12□□□□□ -0.95
VPS11-206ENST00000614944 TTC1Q99614 292 aa9.12□□□□□ -0.95
VPS11-206ENST00000614944 DESI2Q9BSY9 194 aa9.12□□□□□ -0.95
VPS11-206ENST00000614944 ABCG4Q9H172 646 aa9.12□□□□□ -0.95
VPS11-206ENST00000614944 XAB2Q9HCS7 855 aaKnown RBP9.12□□□□□ -0.95
VPS11-206ENST00000614944 TIMMDC1Q9NPL8 285 aa9.12□□□□□ -0.95
VPS11-206ENST00000614944 IL20Q9NYY1 176 aa9.12□□□□□ -0.95
VPS11-206ENST00000614944 NAGPAQ9UK23 515 aa9.12□□□□□ -0.95
VPS11-206ENST00000614944 TDRD15B5MCY1 1934 aaKnown RBP9.12□□□□□ -0.95
VPS11-206ENST00000614944 A8MUI8 341 aa9.12□□□□□ -0.95
VPS11-206ENST00000614944 CPA3P15088 417 aa9.12□□□□□ -0.95
VPS11-206ENST00000614944 CD9P21926 228 aa9.12□□□□□ -0.95
VPS11-206ENST00000614944 FAM133BQ5BKY9 247 aaKnown RBP9.12□□□□□ -0.95
VPS11-206ENST00000614944 UNC5DQ6UXZ4 953 aa9.12□□□□□ -0.95
VPS11-206ENST00000614944 SLC39A5Q6ZMH5 540 aa9.12□□□□□ -0.95
VPS11-206ENST00000614944 UNC93AQ86WB7 457 aa9.12□□□□□ -0.95
VPS11-206ENST00000614944 RNPEPL1Q9HAU8 725 aa9.12□□□□□ -0.95
VPS11-206ENST00000614944 RIMKLBQ9ULI2 386 aa9.12□□□□□ -0.95
VPS11-206ENST00000614944 PCDHGB3Q9Y5G1 929 aa9.12□□□□□ -0.95
VPS11-206ENST00000614944 CARNS1A5YM72 827 aa9.12□□□□□ -0.95
VPS11-206ENST00000614944 RECQL4O94761 1208 aa9.12□□□□□ -0.95
VPS11-206ENST00000614944 CYP1A1P04798 512 aaPredicted RBP9.12□□□□□ -0.95
VPS11-206ENST00000614944 ENO2P09104 434 aaPredicted RBP9.12□□□□□ -0.95
VPS11-206ENST00000614944 TMEM253P0C7T8 217 aa9.12□□□□□ -0.95
VPS11-206ENST00000614944 GNA13Q14344 377 aa9.12□□□□□ -0.95
VPS11-206ENST00000614944 STILQ15468 1287 aa9.12□□□□□ -0.95
VPS11-206ENST00000614944 ZNF699Q32M78 642 aa9.12□□□□□ -0.95
VPS11-206ENST00000614944 PLEKHG4Q58EX7 1191 aa9.12□□□□□ -0.95
VPS11-206ENST00000614944 FAM47CQ5HY64 1035 aa9.12□□□□□ -0.95
VPS11-206ENST00000614944 SYCP2LQ5T4T6 812 aa9.12□□□□□ -0.95
VPS11-206ENST00000614944 ZNF618Q5T7W0 954 aa9.12□□□□□ -0.95
VPS11-206ENST00000614944 GJB7Q6PEY0 223 aa9.12□□□□□ -0.95
VPS11-206ENST00000614944 TTC23LQ6PF05 361 aa9.12□□□□□ -0.95
VPS11-206ENST00000614944 KLHL35Q6PF15 583 aa9.12□□□□□ -0.95
VPS11-206ENST00000614944 LRRC8DQ7L1W4 858 aa9.12□□□□□ -0.95
VPS11-206ENST00000614944 SLC35F6Q8N357 371 aa9.12□□□□□ -0.95
VPS11-206ENST00000614944 KLHL29Q96CT2 875 aa9.12□□□□□ -0.95
VPS11-206ENST00000614944 MRPL9Q9BYD2 267 aaKnown RBP9.12□□□□□ -0.95
VPS11-206ENST00000614944 SNTG2Q9NY99 539 aa9.12□□□□□ -0.95
VPS11-206ENST00000614944 DSEQ9UL01 958 aa9.12□□□□□ -0.95
VPS11-206ENST00000614944 PADI3Q9ULW8 664 aa9.12□□□□□ -0.95
VPS11-206ENST00000614944 COL4A4P53420 1690 aaPredicted RBP9.12□□□□□ -0.95
VPS11-206ENST00000614944 TMEM189-UBE2V1I3L0A0 370 aa9.11□□□□□ -0.95
VPS11-206ENST00000614944 DDX3XO00571 662 aaKnown RBP eCLIP9.11□□□□□ -0.959e-7■□□□□ 10
VPS11-206ENST00000614944 CST3P01034 146 aaPredicted RBP9.11□□□□□ -0.95
VPS11-206ENST00000614944 CYP11B1P15538 503 aa9.11□□□□□ -0.95
VPS11-206ENST00000614944 PRKACAP17612 351 aa9.11□□□□□ -0.95
VPS11-206ENST00000614944 PTDSS1P48651 473 aaKnown RBP9.11□□□□□ -0.95
VPS11-206ENST00000614944 LAPTM5Q13571 262 aa9.11□□□□□ -0.95
VPS11-206ENST00000614944 INSCQ1MX18 579 aa9.11□□□□□ -0.95
VPS11-206ENST00000614944 SNX30Q5VWJ9 437 aa9.11□□□□□ -0.95
VPS11-206ENST00000614944 CLVS1Q8IUQ0 354 aaPredicted RBP9.11□□□□□ -0.95
VPS11-206ENST00000614944 ANKMY2Q8IV38 441 aa9.11□□□□□ -0.95
VPS11-206ENST00000614944 LNX1Q8TBB1 728 aaPredicted RBP9.11□□□□□ -0.95
VPS11-206ENST00000614944 AIFM2Q9BRQ8 373 aa9.11□□□□□ -0.95
VPS11-206ENST00000614944 IFIH1Q9BYX4 1025 aaKnown RBP9.11□□□□□ -0.95
VPS11-206ENST00000614944 LHX5Q9H2C1 402 aa9.11□□□□□ -0.95
VPS11-206ENST00000614944 FAM114A2Q9NRY5 505 aa9.11□□□□□ -0.95
VPS11-206ENST00000614944 TRMT13Q9NUP7 481 aaKnown RBP9.11□□□□□ -0.95
VPS11-206ENST00000614944 NUMBLQ9Y6R0 609 aa9.11□□□□□ -0.95
VPS11-206ENST00000614944 UMODL1Q5DID0 1318 aa9.11□□□□□ -0.95
VPS11-206ENST00000614944 SMIM28A0A1B0GU29 152 aa9.11□□□□□ -0.95
VPS11-206ENST00000614944 TMEM114B3SHH9 223 aa9.11□□□□□ -0.95
VPS11-206ENST00000614944 C9IYK1 514 aa9.11□□□□□ -0.95
VPS11-206ENST00000614944 ADAM23O75077 832 aa9.11□□□□□ -0.95
VPS11-206ENST00000614944 KRT16P08779 473 aa9.11□□□□□ -0.95
VPS11-206ENST00000614944 ITGA4P13612 1032 aa9.11□□□□□ -0.95
VPS11-206ENST00000614944 CHRNB2P17787 502 aa9.11□□□□□ -0.95
VPS11-206ENST00000614944 PHBP35232 272 aa9.11□□□□□ -0.95
VPS11-206ENST00000614944 MYL6P60660 151 aa9.11□□□□□ -0.95
VPS11-206ENST00000614944 LMNB2Q03252 620 aa9.11□□□□□ -0.95
VPS11-206ENST00000614944 ZNF667Q5HYK9 610 aa9.11□□□□□ -0.95
VPS11-206ENST00000614944 C9orf57Q5W0N0 161 aa9.11□□□□□ -0.95
VPS11-206ENST00000614944 Q6ZNX1 250 aa9.11□□□□□ -0.95
VPS11-206ENST00000614944 NOP9Q86U38 636 aaKnown RBP9.11□□□□□ -0.95
VPS11-206ENST00000614944 PPM1KQ8N3J5 372 aa9.11□□□□□ -0.95
VPS11-206ENST00000614944 TOP6BLQ8N6T0 577 aa9.11□□□□□ -0.95
VPS11-206ENST00000614944 FLCNQ8NFG4 579 aa9.11□□□□□ -0.95
VPS11-206ENST00000614944 STK32AQ8WU08 396 aa9.11□□□□□ -0.95
VPS11-206ENST00000614944 KIF12Q96FN5 646 aa9.11□□□□□ -0.95
VPS11-206ENST00000614944 ATP6V1G3Q96LB4 118 aa9.11□□□□□ -0.95
VPS11-206ENST00000614944 ZIM3Q96PE6 472 aa9.11□□□□□ -0.95
VPS11-206ENST00000614944 SERHL2Q9H4I8 314 aa9.11□□□□□ -0.95
VPS11-206ENST00000614944 AVENQ9NQS1 362 aaPredicted RBP9.11□□□□□ -0.95
VPS11-206ENST00000614944 SELENONQ9NZV5 590 aa9.11□□□□□ -0.95
VPS11-206ENST00000614944 FAF1Q9UNN5 650 aaPredicted RBP9.11□□□□□ -0.95
VPS11-206ENST00000614944 NOD1Q9Y239 953 aa9.11□□□□□ -0.95
VPS11-206ENST00000614944 CFL2Q9Y281 166 aa9.11□□□□□ -0.95
VPS11-206ENST00000614944 TRIP11Q15643 1979 aa9.11□□□□□ -0.95
VPS11-206ENST00000614944 CES2O00748 559 aa9.1□□□□□ -0.95
VPS11-206ENST00000614944 NVLO15381 856 aaKnown RBP9.1□□□□□ -0.95
VPS11-206ENST00000614944 RNASEH2AO75792 299 aaKnown RBP9.1□□□□□ -0.95
VPS11-206ENST00000614944 IL32P24001 234 aa9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms