RNA–Protein interactions for RNA: ENST00000614678.1

CPNE3-208, Transcript of copine 3, humanhuman

TSL 1 (best)

Gene CPNE3, Length 4,201 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-208ENST00000614678 NME3Q13232 169 aa5.95□□□□□ -1.46
CPNE3-208ENST00000614678 ZNF268Q14587 947 aaPredicted RBP5.95□□□□□ -1.46
CPNE3-208ENST00000614678 FYB2Q5VWT5 728 aa5.95□□□□□ -1.46
CPNE3-208ENST00000614678 IL17RCQ8NAC3 791 aa5.95□□□□□ -1.46
CPNE3-208ENST00000614678 TXNDC5Q8NBS9 432 aaKnown RBP5.95□□□□□ -1.46
CPNE3-208ENST00000614678 JOSD2Q8TAC2 188 aa5.95□□□□□ -1.46
CPNE3-208ENST00000614678 CYB5D2Q8WUJ1 264 aa5.95□□□□□ -1.46
CPNE3-208ENST00000614678 BAP1Q92560 729 aa5.95□□□□□ -1.46
CPNE3-208ENST00000614678 CFAP57Q96MR6 1250 aa5.95□□□□□ -1.46
CPNE3-208ENST00000614678 CHRDQ9H2X0 955 aa5.95□□□□□ -1.46
CPNE3-208ENST00000614678 CACNA2D2Q9NY47 1150 aa5.95□□□□□ -1.46
CPNE3-208ENST00000614678 STIM2Q9P246 746 aa5.95□□□□□ -1.46
CPNE3-208ENST00000614678 ATP8B3O60423 1300 aa5.95□□□□□ -1.46
CPNE3-208ENST00000614678 KIR2DL1P43626 348 aaPredicted RBP5.95□□□□□ -1.46
CPNE3-208ENST00000614678 C15orf59Q2T9L4 293 aaPredicted RBP5.95□□□□□ -1.46
CPNE3-208ENST00000614678 OR6B2Q6IFH4 312 aa5.95□□□□□ -1.46
CPNE3-208ENST00000614678 OLFML1Q6UWY5 402 aa5.95□□□□□ -1.46
CPNE3-208ENST00000614678 C14orf80Q86SX3 495 aa5.95□□□□□ -1.46
CPNE3-208ENST00000614678 RALGPS2Q86X27 583 aaPredicted RBP5.95□□□□□ -1.46
CPNE3-208ENST00000614678 PPP1R13BQ96KQ4 1090 aa5.95□□□□□ -1.46
CPNE3-208ENST00000614678 FSCN3Q9NQT6 498 aa5.95□□□□□ -1.46
CPNE3-208ENST00000614678 DNAJC17Q9NVM6 304 aaKnown RBP5.95□□□□□ -1.46
CPNE3-208ENST00000614678 THG1LQ9NWX6 298 aaKnown RBP5.95□□□□□ -1.46
CPNE3-208ENST00000614678 OBP2AQ9NY56 170 aa5.95□□□□□ -1.46
CPNE3-208ENST00000614678 SLCO1B1Q9Y6L6 691 aa5.95□□□□□ -1.46
CPNE3-208ENST00000614678 CHD8Q9HCK8 2581 aa5.95□□□□□ -1.46
CPNE3-208ENST00000614678 GTPBP10A4D1E9 387 aaKnown RBP5.94□□□□□ -1.46
CPNE3-208ENST00000614678 LRRC10BA6NIK2 292 aa5.94□□□□□ -1.46
CPNE3-208ENST00000614678 LRRC53A6NM62 1247 aa5.94□□□□□ -1.46
CPNE3-208ENST00000614678 KAT7O95251 611 aa5.94□□□□□ -1.46
CPNE3-208ENST00000614678 FGFR1OPO95684 399 aaKnown RBP5.94□□□□□ -1.46
CPNE3-208ENST00000614678 FGF19O95750 216 aa5.94□□□□□ -1.46
CPNE3-208ENST00000614678 DDX6P26196 483 aaKnown RBP eCLIP5.94□□□□□ -1.46
CPNE3-208ENST00000614678 HLA-FP30511 346 aa5.94□□□□□ -1.46
CPNE3-208ENST00000614678 PLA2G5P39877 138 aa5.94□□□□□ -1.46
CPNE3-208ENST00000614678 CTSOP43234 321 aaPredicted RBP5.94□□□□□ -1.46
CPNE3-208ENST00000614678 HTR3DQ70Z44 454 aa5.94□□□□□ -1.46
CPNE3-208ENST00000614678 TMEM110Q86TL2 294 aa5.94□□□□□ -1.46
CPNE3-208ENST00000614678 KCTD13Q8WZ19 329 aa5.94□□□□□ -1.46
CPNE3-208ENST00000614678 CD101Q93033 1021 aa5.94□□□□□ -1.46
CPNE3-208ENST00000614678 ATP2A3Q93084 1043 aa5.94□□□□□ -1.46
CPNE3-208ENST00000614678 FCRL2Q96LA5 508 aaPredicted RBP5.94□□□□□ -1.46
CPNE3-208ENST00000614678 C11orf70Q9BRQ4 267 aa5.94□□□□□ -1.46
CPNE3-208ENST00000614678 PNPLA8Q9NP80 782 aa5.94□□□□□ -1.46
CPNE3-208ENST00000614678 PIGVQ9NUD9 493 aa5.94□□□□□ -1.46
CPNE3-208ENST00000614678 CISD3P0C7P0 127 aa5.94□□□□□ -1.46
CPNE3-208ENST00000614678 CD70P32970 193 aa5.94□□□□□ -1.46
CPNE3-208ENST00000614678 KRT9P35527 623 aa5.94□□□□□ -1.46
CPNE3-208ENST00000614678 RPL34P49207 117 aaKnown RBP5.94□□□□□ -1.46
CPNE3-208ENST00000614678 ANO7Q6IWH7 933 aa5.94□□□□□ -1.46
CPNE3-208ENST00000614678 MDGA1Q8NFP4 955 aa5.94□□□□□ -1.46
CPNE3-208ENST00000614678 TRPV5Q9NQA5 729 aa5.94□□□□□ -1.46
CPNE3-208ENST00000614678 ARHGEF4Q9NR80 690 aa5.94□□□□□ -1.46
CPNE3-208ENST00000614678 DACH1Q9UI36 760 aa5.94□□□□□ -1.46
CPNE3-208ENST00000614678 E2F8A0AVK6 867 aa5.94□□□□□ -1.46
CPNE3-208ENST00000614678 TBC1D3BA6NDS4 549 aa5.94□□□□□ -1.46
CPNE3-208ENST00000614678 LAMTOR5O43504 91 aa5.94□□□□□ -1.46
CPNE3-208ENST00000614678 ADCY5O95622 1261 aa5.94□□□□□ -1.46
CPNE3-208ENST00000614678 VAV1P15498 845 aa5.94□□□□□ -1.46
CPNE3-208ENST00000614678 HOXD9P28356 352 aaPredicted RBP5.94□□□□□ -1.46
CPNE3-208ENST00000614678 RPL7AP62424 266 aaKnown RBP5.94□□□□□ -1.46
CPNE3-208ENST00000614678 NOMO3P69849 1222 aa5.94□□□□□ -1.46
CPNE3-208ENST00000614678 ATP11AP98196 1134 aa5.94□□□□□ -1.46
CPNE3-208ENST00000614678 CDO1Q16878 200 aa5.94□□□□□ -1.46
CPNE3-208ENST00000614678 PIK3R6Q5UE93 754 aa5.94□□□□□ -1.46
CPNE3-208ENST00000614678 RAP1GAP2Q684P5 730 aa5.94□□□□□ -1.46
CPNE3-208ENST00000614678 IRF2BP2Q7Z5L9 587 aa5.94□□□□□ -1.46
CPNE3-208ENST00000614678 XYLT1Q86Y38 959 aa5.94□□□□□ -1.46
CPNE3-208ENST00000614678 PDZD8Q8NEN9 1154 aa5.94□□□□□ -1.46
CPNE3-208ENST00000614678 STK33Q9BYT3 514 aa5.94□□□□□ -1.46
CPNE3-208ENST00000614678 CNGB3Q9NQW8 809 aa5.94□□□□□ -1.46
CPNE3-208ENST00000614678 IFNKQ9P0W0 207 aa5.94□□□□□ -1.46
CPNE3-208ENST00000614678 RALGAPA1Q6GYQ0 2036 aa5.94□□□□□ -1.46
CPNE3-208ENST00000614678 PI4KAP42356 2102 aa5.94□□□□□ -1.46
CPNE3-208ENST00000614678 SMG1Q96Q15 3661 aaKnown RBP5.94□□□□□ -1.46
CPNE3-208ENST00000614678 KLF8O95600 359 aaPredicted RBP5.94□□□□□ -1.46
CPNE3-208ENST00000614678 SETSIPP0DME0 302 aa5.94□□□□□ -1.46
CPNE3-208ENST00000614678 BCKDHBP21953 392 aa5.94□□□□□ -1.46
CPNE3-208ENST00000614678 SOX5P35711 763 aa5.94□□□□□ -1.46
CPNE3-208ENST00000614678 METAP1P53582 386 aa5.94□□□□□ -1.46
CPNE3-208ENST00000614678 FANCCQ00597 558 aa5.94□□□□□ -1.46
CPNE3-208ENST00000614678 PTK2Q05397 1052 aa5.94□□□□□ -1.46
CPNE3-208ENST00000614678 PTP4A2Q12974 167 aa5.94□□□□□ -1.46
CPNE3-208ENST00000614678 NR1I3Q14994 352 aa5.94□□□□□ -1.46
CPNE3-208ENST00000614678 C10orf76Q5T2E6 689 aa5.94□□□□□ -1.46
CPNE3-208ENST00000614678 TCEAL6Q6IPX3 200 aa5.94□□□□□ -1.46
CPNE3-208ENST00000614678 TCEAL3Q969E4 200 aa5.94□□□□□ -1.46
CPNE3-208ENST00000614678 IGSF8Q969P0 613 aa5.94□□□□□ -1.46
CPNE3-208ENST00000614678 FAM122AQ96E09 287 aa5.94□□□□□ -1.46
CPNE3-208ENST00000614678 SHDQ96IW2 340 aa5.94□□□□□ -1.46
CPNE3-208ENST00000614678 NDFIP2Q9NV92 336 aa5.94□□□□□ -1.46
CPNE3-208ENST00000614678 SEPT11Q9NVA2 429 aaKnown RBP5.94□□□□□ -1.46
CPNE3-208ENST00000614678 CLIC5Q9NZA1 410 aa5.94□□□□□ -1.46
CPNE3-208ENST00000614678 INTS6Q9UL03 887 aaKnown RBP5.94□□□□□ -1.46
CPNE3-208ENST00000614678 TFR2Q9UP52 801 aa5.94□□□□□ -1.46
CPNE3-208ENST00000614678 FAM72CH0Y354 149 aa5.93□□□□□ -1.46
CPNE3-208ENST00000614678 GDF9O60383 454 aa5.93□□□□□ -1.46
CPNE3-208ENST00000614678 CNTN5O94779 1100 aa5.93□□□□□ -1.46
CPNE3-208ENST00000614678 TRUB2O95900 331 aaKnown RBP5.93□□□□□ -1.46
CPNE3-208ENST00000614678 TCF4P15884 667 aa5.93□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms