RNA–Protein interactions for RNA: ENST00000613788.1

CD48-203, Transcript of CD48 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD48, Length 1,500 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD48-203ENST00000613788 OTUD1Q5VV17 481 aaPredicted RBP15.29■□□□□ 0.04
CD48-203ENST00000613788 NUGGCQ68CJ6 796 aa15.29■□□□□ 0.04
CD48-203ENST00000613788 SCYL2Q6P3W7 929 aa15.29■□□□□ 0.04
CD48-203ENST00000613788 TRIM58Q8NG06 486 aa15.29■□□□□ 0.04
CD48-203ENST00000613788 SMARCD2Q92925 531 aa15.29■□□□□ 0.04
CD48-203ENST00000613788 PLD4Q96BZ4 506 aa15.29■□□□□ 0.04
CD48-203ENST00000613788 SLC39A13Q96H72 371 aa15.29■□□□□ 0.04
CD48-203ENST00000613788 ALS2CR12Q96Q35 445 aa15.29■□□□□ 0.04
CD48-203ENST00000613788 ADAM33Q9BZ11 813 aa15.29■□□□□ 0.04
CD48-203ENST00000613788 DCLK3Q9C098 648 aa15.29■□□□□ 0.04
CD48-203ENST00000613788 GKN1Q9NS71 199 aa15.29■□□□□ 0.04
CD48-203ENST00000613788 PIGVQ9NUD9 493 aa15.29■□□□□ 0.04
CD48-203ENST00000613788 SMPD4Q9NXE4 827 aa15.29■□□□□ 0.04
CD48-203ENST00000613788 CALCOCO1Q9P1Z2 691 aa15.29■□□□□ 0.04
CD48-203ENST00000613788 SLC12A6Q9UHW9 1150 aa15.29■□□□□ 0.04
CD48-203ENST00000613788 C2orf16Q68DN1 1984 aa15.29■□□□□ 0.04
CD48-203ENST00000613788 GRID2IPA4D2P6 1211 aa15.28■□□□□ 0.04
CD48-203ENST00000613788 USP27XA6NNY8 438 aa15.28■□□□□ 0.04
CD48-203ENST00000613788 SPOPO43791 374 aa15.28■□□□□ 0.04
CD48-203ENST00000613788 PRPSAP2O60256 369 aa15.28■□□□□ 0.04
CD48-203ENST00000613788 KIF5CO60282 957 aa15.28■□□□□ 0.04
CD48-203ENST00000613788 LRCH4O75427 683 aa15.28■□□□□ 0.04
CD48-203ENST00000613788 PALMO75781 387 aa15.28■□□□□ 0.04
CD48-203ENST00000613788 APOEP02649 317 aa15.28■□□□□ 0.04
CD48-203ENST00000613788 LAMP2P13473 410 aa15.28■□□□□ 0.04
CD48-203ENST00000613788 MSNP26038 577 aaKnown RBP15.28■□□□□ 0.04
CD48-203ENST00000613788 SSR1P43307 286 aaKnown RBP15.28■□□□□ 0.04
CD48-203ENST00000613788 ZC3H12AQ5D1E8 599 aaKnown RBP15.28■□□□□ 0.04
CD48-203ENST00000613788 ARFGAP1Q8N6T3 406 aa15.28■□□□□ 0.04
CD48-203ENST00000613788 CELF5Q8N6W0 485 aaKnown RBP15.28■□□□□ 0.04
CD48-203ENST00000613788 USP13Q92995 863 aaPredicted RBP15.28■□□□□ 0.04
CD48-203ENST00000613788 E2F7Q96AV8 911 aa15.28■□□□□ 0.04
CD48-203ENST00000613788 ZFRQ96KR1 1074 aaKnown RBP15.28■□□□□ 0.04
CD48-203ENST00000613788 ASB16Q96NS5 453 aa15.28■□□□□ 0.04
CD48-203ENST00000613788 MYADMQ96S97 322 aa15.28■□□□□ 0.04
CD48-203ENST00000613788 TRPV4Q9HBA0 871 aa15.28■□□□□ 0.04
CD48-203ENST00000613788 LSM7Q9UK45 103 aaKnown RBP15.28■□□□□ 0.04
CD48-203ENST00000613788 USP18Q9UMW8 372 aa15.28■□□□□ 0.04
CD48-203ENST00000613788 SH3BP1Q9Y3L3 701 aa15.28■□□□□ 0.04
CD48-203ENST00000613788 DOCK6Q96HP0 2047 aa15.28■□□□□ 0.04
CD48-203ENST00000613788 LEFTY2O00292 366 aa15.27■□□□□ 0.04
CD48-203ENST00000613788 STC2O76061 302 aa15.27■□□□□ 0.04
CD48-203ENST00000613788 IGLV3-27P01718 113 aa15.27■□□□□ 0.04
CD48-203ENST00000613788 IRF1P10914 325 aa15.27■□□□□ 0.04
CD48-203ENST00000613788 TCF3P15923 654 aa15.27■□□□□ 0.04
CD48-203ENST00000613788 COMTP21964 271 aa15.27■□□□□ 0.04
CD48-203ENST00000613788 MIPP30301 263 aa15.27■□□□□ 0.04
CD48-203ENST00000613788 ATXN1P54253 815 aaKnown RBP15.27■□□□□ 0.04
CD48-203ENST00000613788 AIF1P55008 147 aa15.27■□□□□ 0.04
CD48-203ENST00000613788 SMAD2Q15796 467 aaKnown RBP15.27■□□□□ 0.04
CD48-203ENST00000613788 AAK1Q2M2I8 961 aa15.27■□□□□ 0.04
CD48-203ENST00000613788 BOLA3Q53S33 107 aa15.27■□□□□ 0.04
CD48-203ENST00000613788 FAM78AQ5JUQ0 283 aa15.27■□□□□ 0.04
CD48-203ENST00000613788 PTCRAQ6ISU1 281 aaPredicted RBP15.27■□□□□ 0.04
CD48-203ENST00000613788 POTEHQ6S545 545 aa15.27■□□□□ 0.04
CD48-203ENST00000613788 SLFN11Q7Z7L1 901 aa15.27■□□□□ 0.04
CD48-203ENST00000613788 FAM131BQ86XD5 332 aa15.27■□□□□ 0.04
CD48-203ENST00000613788 ATP6V0D2Q8N8Y2 350 aa15.27■□□□□ 0.04
CD48-203ENST00000613788 LRRC57Q8N9N7 239 aa15.27■□□□□ 0.04
CD48-203ENST00000613788 SH3RF2Q8TEC5 729 aa15.27■□□□□ 0.04
CD48-203ENST00000613788 FCRL2Q96LA5 508 aaPredicted RBP15.27■□□□□ 0.04
CD48-203ENST00000613788 PHF7Q9BWX1 381 aaPredicted RBP15.27■□□□□ 0.04
CD48-203ENST00000613788 TKTL2Q9H0I9 626 aa15.27■□□□□ 0.04
CD48-203ENST00000613788 SMG9Q9H0W8 520 aaKnown RBP15.27■□□□□ 0.04
CD48-203ENST00000613788 OBP2AQ9NY56 170 aa15.27■□□□□ 0.04
CD48-203ENST00000613788 EIF2AK3Q9NZJ5 1116 aaKnown RBP15.27■□□□□ 0.04
CD48-203ENST00000613788 PCSK1NQ9UHG2 260 aa15.27■□□□□ 0.04
CD48-203ENST00000613788 NR2E1Q9Y466 385 aa15.27■□□□□ 0.04
CD48-203ENST00000613788 CAPN6Q9Y6Q1 641 aa15.27■□□□□ 0.04
CD48-203ENST00000613788 ANAPC1Q9H1A4 1944 aa15.27■□□□□ 0.04
CD48-203ENST00000613788 E2F8A0AVK6 867 aa15.27■□□□□ 0.03
CD48-203ENST00000613788 ADRA1BP35368 520 aa15.27■□□□□ 0.03
CD48-203ENST00000613788 SLC11A2P49281 568 aa15.27■□□□□ 0.03
CD48-203ENST00000613788 KCNQ1P51787 676 aa15.27■□□□□ 0.03
CD48-203ENST00000613788 RAB6CQ53S08 254 aa15.27■□□□□ 0.03
CD48-203ENST00000613788 ACBD5Q5T8D3 534 aaPredicted RBP15.27■□□□□ 0.03
CD48-203ENST00000613788 PEX26Q7Z412 305 aa15.27■□□□□ 0.03
CD48-203ENST00000613788 ZSCAN30Q86W11 494 aa15.27■□□□□ 0.03
CD48-203ENST00000613788 PLCD3Q8N3E9 789 aa15.27■□□□□ 0.03
CD48-203ENST00000613788 KIAA1958Q8N8K9 716 aa15.27■□□□□ 0.03
CD48-203ENST00000613788 AZIN2Q96A70 460 aa15.27■□□□□ 0.03
CD48-203ENST00000613788 NTAN1Q96AB6 310 aa15.27■□□□□ 0.03
CD48-203ENST00000613788 BTN2A3PQ96KV6 586 aa15.27■□□□□ 0.03
CD48-203ENST00000613788 RAB6CQ9H0N0 254 aa15.27■□□□□ 0.03
CD48-203ENST00000613788 ZFP14Q9HCL3 533 aa15.27■□□□□ 0.03
CD48-203ENST00000613788 ARHGEF38Q9NXL2 777 aa15.27■□□□□ 0.03
CD48-203ENST00000613788 CFAP97Q9P2B7 532 aa15.27■□□□□ 0.03
CD48-203ENST00000613788 EPS15L1Q9UBC2 864 aa15.27■□□□□ 0.03
CD48-203ENST00000613788 AMFRQ9UKV5 643 aa15.27■□□□□ 0.03
CD48-203ENST00000613788 ZNF510Q9Y2H8 683 aa15.27■□□□□ 0.03
CD48-203ENST00000613788 DENND4CQ5VZ89 1909 aa15.26■□□□□ 0.03
CD48-203ENST00000613788 OBSL1O75147 1896 aa15.26■□□□□ 0.03
CD48-203ENST00000613788 KCNU1A8MYU2 1149 aa15.26■□□□□ 0.03
CD48-203ENST00000613788 PRAMEF12O95522 483 aa15.26■□□□□ 0.03
CD48-203ENST00000613788 KRT7P08729 469 aa15.26■□□□□ 0.03
CD48-203ENST00000613788 CORO1AP31146 461 aaKnown RBP15.26■□□□□ 0.03
CD48-203ENST00000613788 ZXDBP98169 803 aa15.26■□□□□ 0.03
CD48-203ENST00000613788 ERMARDQ5T6L9 678 aa15.26■□□□□ 0.03
CD48-203ENST00000613788 LRRC38Q5VT99 294 aa15.26■□□□□ 0.03
CD48-203ENST00000613788 DAB2IPQ5VWQ8 1189 aa15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms