RNA–Protein interactions for RNA: ENST00000613455.4

CPNE9-205, Transcript of copine family member 9, humanhuman

TSL 5 BASIC

Gene CPNE9, Length 1,742 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE9-205ENST00000613455 EPCAMP16422 314 aa21.03■□□□□ 0.96
CPNE9-205ENST00000613455 NAA30Q147X3 362 aaPredicted RBP21.03■□□□□ 0.96
CPNE9-205ENST00000613455 C10orf120Q5SQS8 335 aa21.03■□□□□ 0.96
CPNE9-205ENST00000613455 TEX35Q5T0J7 233 aa21.03■□□□□ 0.96
CPNE9-205ENST00000613455 VSIG1Q86XK7 387 aa21.03■□□□□ 0.96
CPNE9-205ENST00000613455 TMC8Q8IU68 726 aa21.03■□□□□ 0.96
CPNE9-205ENST00000613455 MMGT1Q8N4V1 131 aa21.03■□□□□ 0.96
CPNE9-205ENST00000613455 LRRC3Q9BY71 257 aa21.03■□□□□ 0.96
CPNE9-205ENST00000613455 WDCPQ9H6R7 721 aa21.03■□□□□ 0.96
CPNE9-205ENST00000613455 ARHGEF38Q9NXL2 777 aa21.03■□□□□ 0.96
CPNE9-205ENST00000613455 TRPM5Q9NZQ8 1165 aa21.03■□□□□ 0.96
CPNE9-205ENST00000613455 TLR6Q9Y2C9 796 aa21.03■□□□□ 0.96
CPNE9-205ENST00000613455 EFR3BQ9Y2G0 817 aa21.03■□□□□ 0.96
CPNE9-205ENST00000613455 NNTQ13423 1086 aa21.02■□□□□ 0.96
CPNE9-205ENST00000613455 PPP6R3Q5H9R7 873 aaPredicted RBP21.02■□□□□ 0.96
CPNE9-205ENST00000613455 EFHC2Q5JST6 749 aa21.02■□□□□ 0.96
CPNE9-205ENST00000613455 RTL10Q7L3V2 364 aa21.02■□□□□ 0.96
CPNE9-205ENST00000613455 MAP7D3Q8IWC1 876 aa21.02■□□□□ 0.96
CPNE9-205ENST00000613455 TIFAQ96CG3 184 aa21.02■□□□□ 0.96
CPNE9-205ENST00000613455 FAF2Q96CS3 445 aa21.02■□□□□ 0.96
CPNE9-205ENST00000613455 SLC39A13Q96H72 371 aa21.02■□□□□ 0.96
CPNE9-205ENST00000613455 ZNF670Q9BS34 389 aa21.02■□□□□ 0.96
CPNE9-205ENST00000613455 TKTL2Q9H0I9 626 aa21.02■□□□□ 0.96
CPNE9-205ENST00000613455 PLEKHA4Q9H4M7 779 aa21.02■□□□□ 0.96
CPNE9-205ENST00000613455 MARCH2Q9P0N8 246 aa21.02■□□□□ 0.96
CPNE9-205ENST00000613455 GOLGA6L10A0A0M3HER8 536 aa21.01■□□□□ 0.95
CPNE9-205ENST00000613455 ZNF487B1APH4 448 aa21.01■□□□□ 0.95
CPNE9-205ENST00000613455 CCDC188H7C350 402 aa21.01■□□□□ 0.95
CPNE9-205ENST00000613455 F11P03951 625 aa21.01■□□□□ 0.95
CPNE9-205ENST00000613455 PPP3CCP48454 512 aa21.01■□□□□ 0.95
CPNE9-205ENST00000613455 TERF1P54274 439 aa21.01■□□□□ 0.95
CPNE9-205ENST00000613455 PPP2R5DQ14738 602 aa21.01■□□□□ 0.95
CPNE9-205ENST00000613455 BRMS1LQ5PSV4 323 aa21.01■□□□□ 0.95
CPNE9-205ENST00000613455 PPM1LQ5SGD2 360 aa21.01■□□□□ 0.95
CPNE9-205ENST00000613455 FCRL2Q96LA5 508 aaPredicted RBP21.01■□□□□ 0.95
CPNE9-205ENST00000613455 CDK5RAP1Q96SZ6 601 aaKnown RBP21.01■□□□□ 0.95
CPNE9-205ENST00000613455 DDX47Q9H0S4 455 aaKnown RBP21.01■□□□□ 0.95
CPNE9-205ENST00000613455 R3HDM2Q9Y2K5 976 aaKnown RBP21.01■□□□□ 0.95
CPNE9-205ENST00000613455 HCFC2Q9Y5Z7 792 aa21.01■□□□□ 0.95
CPNE9-205ENST00000613455 DOCK6Q96HP0 2047 aa21.01■□□□□ 0.95
CPNE9-205ENST00000613455 KCNU1A8MYU2 1149 aa21.01■□□□□ 0.95
CPNE9-205ENST00000613455 CCL16O15467 120 aa21.01■□□□□ 0.95
CPNE9-205ENST00000613455 RFPL2O75678 378 aa21.01■□□□□ 0.95
CPNE9-205ENST00000613455 ZMYND10O75800 440 aa21.01■□□□□ 0.95
CPNE9-205ENST00000613455 TJP3O95049 919 aa21.01■□□□□ 0.95
CPNE9-205ENST00000613455 CCR1P32246 355 aa21.01■□□□□ 0.95
CPNE9-205ENST00000613455 TUBP50607 506 aa21.01■□□□□ 0.95
CPNE9-205ENST00000613455 SMAD3P84022 425 aaKnown RBP21.01■□□□□ 0.95
CPNE9-205ENST00000613455 SEMA3BQ13214 749 aa21.01■□□□□ 0.95
CPNE9-205ENST00000613455 CYP1B1Q16678 543 aa21.01■□□□□ 0.95
CPNE9-205ENST00000613455 ERCC6LQ2NKX8 1250 aa21.01■□□□□ 0.95
CPNE9-205ENST00000613455 ARL13BQ3SXY8 428 aa21.01■□□□□ 0.95
CPNE9-205ENST00000613455 HECTD3Q5T447 861 aa21.01■□□□□ 0.95
CPNE9-205ENST00000613455 CHRDL2Q6WN34 429 aa21.01■□□□□ 0.95
CPNE9-205ENST00000613455 RBM23Q86U06 439 aaKnown RBP21.01■□□□□ 0.95
CPNE9-205ENST00000613455 MIB1Q86YT6 1006 aa21.01■□□□□ 0.95
CPNE9-205ENST00000613455 HS6ST3Q8IZP7 471 aa21.01■□□□□ 0.95
CPNE9-205ENST00000613455 MAIP1Q8WWC4 291 aa21.01■□□□□ 0.95
CPNE9-205ENST00000613455 RNF34Q969K3 372 aa21.01■□□□□ 0.95
CPNE9-205ENST00000613455 KRT12Q99456 494 aa21.01■□□□□ 0.95
CPNE9-205ENST00000613455 RASAL2Q9UJF2 1139 aa21.01■□□□□ 0.95
CPNE9-205ENST00000613455 UQCRHLA0A096LP55 91 aa21■□□□□ 0.95
CPNE9-205ENST00000613455 COCHO43405 550 aa21■□□□□ 0.95
CPNE9-205ENST00000613455 OAS1P00973 400 aaKnown RBP21■□□□□ 0.95
CPNE9-205ENST00000613455 IGLV3-27P01718 113 aa21■□□□□ 0.95
CPNE9-205ENST00000613455 UQCRHP07919 91 aa21■□□□□ 0.95
CPNE9-205ENST00000613455 TRIP4Q15650 581 aaPredicted RBP21■□□□□ 0.95
CPNE9-205ENST00000613455 ANKRD20A8PQ5CZ79 823 aa21■□□□□ 0.95
CPNE9-205ENST00000613455 KLHDC10Q6PID8 442 aa21■□□□□ 0.95
CPNE9-205ENST00000613455 BBS12Q6ZW61 710 aa21■□□□□ 0.95
CPNE9-205ENST00000613455 GAREM2Q75VX8 874 aa21■□□□□ 0.95
CPNE9-205ENST00000613455 KLHL7Q8IXQ5 586 aa21■□□□□ 0.95
CPNE9-205ENST00000613455 C12orf50Q8NA57 414 aaPredicted RBP21■□□□□ 0.95
CPNE9-205ENST00000613455 PCDH19Q8TAB3 1148 aa21■□□□□ 0.95
CPNE9-205ENST00000613455 CSPG4P5Q96PW8 444 aa21■□□□□ 0.95
CPNE9-205ENST00000613455 RNF157Q96PX1 679 aa21■□□□□ 0.95
CPNE9-205ENST00000613455 TMEM51Q9NW97 253 aa21■□□□□ 0.95
CPNE9-205ENST00000613455 CWC15Q9P013 229 aaKnown RBP21■□□□□ 0.95
CPNE9-205ENST00000613455 C2orf78A6NCI8 922 aa20.99■□□□□ 0.95
CPNE9-205ENST00000613455 FAM72CH0Y354 149 aa20.99■□□□□ 0.95
CPNE9-205ENST00000613455 RFXAPO00287 272 aa20.99■□□□□ 0.95
CPNE9-205ENST00000613455 CST8O60676 142 aa20.99■□□□□ 0.95
CPNE9-205ENST00000613455 PHF2O75151 1096 aa20.99■□□□□ 0.95
CPNE9-205ENST00000613455 GOT1P17174 413 aa20.99■□□□□ 0.95
CPNE9-205ENST00000613455 HOXA9P31269 272 aa20.99■□□□□ 0.95
CPNE9-205ENST00000613455 TBX4P57082 545 aa20.99■□□□□ 0.95
CPNE9-205ENST00000613455 FAM72AQ5TYM5 149 aa20.99■□□□□ 0.95
CPNE9-205ENST00000613455 FAM72DQ6L9T8 149 aa20.99■□□□□ 0.95
CPNE9-205ENST00000613455 TADA2BQ86TJ2 420 aa20.99■□□□□ 0.95
CPNE9-205ENST00000613455 FAM72BQ86X60 149 aa20.99■□□□□ 0.95
CPNE9-205ENST00000613455 RFX6Q8HWS3 928 aa20.99■□□□□ 0.95
CPNE9-205ENST00000613455 ELMOD1Q8N336 334 aa20.99■□□□□ 0.95
CPNE9-205ENST00000613455 PQLC3Q8N755 202 aa20.99■□□□□ 0.95
CPNE9-205ENST00000613455 UBXN4Q92575 508 aa20.99■□□□□ 0.95
CPNE9-205ENST00000613455 RCOR3Q9P2K3 495 aaPredicted RBP20.99■□□□□ 0.95
CPNE9-205ENST00000613455 DNMT3LQ9UJW3 386 aa20.99■□□□□ 0.95
CPNE9-205ENST00000613455 SNX10Q9Y5X0 201 aa20.99■□□□□ 0.95
CPNE9-205ENST00000613455 MYO9BQ13459 2157 aa20.99■□□□□ 0.95
CPNE9-205ENST00000613455 SLC12A8A0AV02 714 aa20.98■□□□□ 0.95
CPNE9-205ENST00000613455 NRG2O14511 850 aaPredicted RBP20.98■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms