RNA–Protein interactions for RNA: ENST00000613073.4

CNOT3-208, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

TSL 2

Gene CNOT3, Length 2,778 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-208ENST00000613073 CYTH2Q99418 400 aa17.07■□□□□ 0.32
CNOT3-208ENST00000613073 ALG13Q9NP73 1137 aaKnown RBP17.07■□□□□ 0.32
CNOT3-208ENST00000613073 ETNK2Q9NVF9 386 aa17.07■□□□□ 0.32
CNOT3-208ENST00000613073 DYNC1LI1Q9Y6G9 523 aaKnown RBP17.07■□□□□ 0.32
CNOT3-208ENST00000613073 MEIS3P2A8K0S8 358 aa17.06■□□□□ 0.32
CNOT3-208ENST00000613073 PIRO00625 290 aa17.06■□□□□ 0.32
CNOT3-208ENST00000613073 GYG2O15488 501 aa17.06■□□□□ 0.32
CNOT3-208ENST00000613073 ZSCAN9O15535 394 aaPredicted RBP17.06■□□□□ 0.32
CNOT3-208ENST00000613073 PAPSS1O43252 624 aaPredicted RBP17.06■□□□□ 0.32
CNOT3-208ENST00000613073 PRPSAP2O60256 369 aa17.06■□□□□ 0.32
CNOT3-208ENST00000613073 EDF1O60869 148 aaKnown RBP17.06■□□□□ 0.32
CNOT3-208ENST00000613073 PGK1P00558 417 aa17.06■□□□□ 0.32
CNOT3-208ENST00000613073 CA4P22748 312 aa17.06■□□□□ 0.32
CNOT3-208ENST00000613073 TPP2P29144 1249 aaPredicted RBP17.06■□□□□ 0.32
CNOT3-208ENST00000613073 CRYBB1P53674 252 aaPredicted RBP17.06■□□□□ 0.32
CNOT3-208ENST00000613073 CXCL17Q6UXB2 119 aa17.06■□□□□ 0.32
CNOT3-208ENST00000613073 CYP4V2Q6ZWL3 525 aaPredicted RBP17.06■□□□□ 0.32
CNOT3-208ENST00000613073 OTOAQ7RTW8 1153 aa17.06■□□□□ 0.32
CNOT3-208ENST00000613073 CLNKQ7Z7G1 428 aa17.06■□□□□ 0.32
CNOT3-208ENST00000613073 ZCCHC9Q8N567 271 aaKnown RBP17.06■□□□□ 0.32
CNOT3-208ENST00000613073 PDCD7Q8N8D1 485 aaKnown RBP17.06■□□□□ 0.32
CNOT3-208ENST00000613073 SMG8Q8ND04 991 aaKnown RBP17.06■□□□□ 0.32
CNOT3-208ENST00000613073 TRPV1Q8NER1 839 aa17.06■□□□□ 0.32
CNOT3-208ENST00000613073 ZNF184Q99676 751 aaPredicted RBP17.06■□□□□ 0.32
CNOT3-208ENST00000613073 SPATA16Q9BXB7 569 aa17.06■□□□□ 0.32
CNOT3-208ENST00000613073 C12orf65Q9H3J6 166 aaKnown RBP17.06■□□□□ 0.32
CNOT3-208ENST00000613073 MMADHCQ9H3L0 296 aaPredicted RBP17.06■□□□□ 0.32
CNOT3-208ENST00000613073 CTSHP09668 335 aa17.06■□□□□ 0.32
CNOT3-208ENST00000613073 LCP1P13796 627 aa17.06■□□□□ 0.32
CNOT3-208ENST00000613073 TFE3P19532 575 aaPredicted RBP17.06■□□□□ 0.32
CNOT3-208ENST00000613073 AXLP30530 894 aa17.06■□□□□ 0.32
CNOT3-208ENST00000613073 MAGEA4P43358 317 aa17.06■□□□□ 0.32
CNOT3-208ENST00000613073 INHBCP55103 352 aa17.06■□□□□ 0.32
CNOT3-208ENST00000613073 USP46P62068 366 aa17.06■□□□□ 0.32
CNOT3-208ENST00000613073 GAD2Q05329 585 aa17.06■□□□□ 0.32
CNOT3-208ENST00000613073 SPARCL1Q14515 664 aa17.06■□□□□ 0.32
CNOT3-208ENST00000613073 STILQ15468 1287 aa17.06■□□□□ 0.32
CNOT3-208ENST00000613073 SLC1A5Q15758 541 aa17.06■□□□□ 0.32
CNOT3-208ENST00000613073 RSAD2Q8WXG1 361 aa17.06■□□□□ 0.32
CNOT3-208ENST00000613073 MAK16Q9BXY0 300 aaKnown RBP17.06■□□□□ 0.32
CNOT3-208ENST00000613073 VCX3BQ9H321 246 aa17.06■□□□□ 0.32
CNOT3-208ENST00000613073 VCX3AQ9NNX9 186 aa17.06■□□□□ 0.32
CNOT3-208ENST00000613073 LNPEPQ9UIQ6 1025 aa17.06■□□□□ 0.32
CNOT3-208ENST00000613073 HNRNPRO43390 633 aaKnown RBP17.06■□□□□ 0.32
CNOT3-208ENST00000613073 BANF1O75531 89 aa17.06■□□□□ 0.32
CNOT3-208ENST00000613073 PIAS1O75925 651 aa17.06■□□□□ 0.32
CNOT3-208ENST00000613073 MAP3K6O95382 1288 aa17.06■□□□□ 0.32
CNOT3-208ENST00000613073 AMPD1P23109 780 aa17.06■□□□□ 0.32
CNOT3-208ENST00000613073 PCBP1Q15365 356 aaKnown RBP eCLIP17.06■□□□□ 0.321e-6■■■□□ 18.2
CNOT3-208ENST00000613073 SMYD5Q6GMV2 418 aa17.06■□□□□ 0.32
CNOT3-208ENST00000613073 IZUMO2Q6UXV1 221 aa17.06■□□□□ 0.32
CNOT3-208ENST00000613073 UNC45BQ8IWX7 931 aa17.06■□□□□ 0.32
CNOT3-208ENST00000613073 FAM172AQ8WUF8 416 aa17.06■□□□□ 0.32
CNOT3-208ENST00000613073 KHSRPQ92945 711 aaKnown RBP eCLIP17.06■□□□□ 0.32
CNOT3-208ENST00000613073 ZIC5Q96T25 663 aa17.06■□□□□ 0.32
CNOT3-208ENST00000613073 KATNAL1Q9BW62 490 aa17.06■□□□□ 0.32
CNOT3-208ENST00000613073 ARHGAP39Q9C0H5 1083 aa17.06■□□□□ 0.32
CNOT3-208ENST00000613073 SNX25Q9H3E2 840 aa17.06■□□□□ 0.32
CNOT3-208ENST00000613073 FBXO6Q9NRD1 293 aaPredicted RBP17.06■□□□□ 0.32
CNOT3-208ENST00000613073 PDP2Q9P2J9 529 aa17.06■□□□□ 0.32
CNOT3-208ENST00000613073 ATXN10Q9UBB4 475 aa17.06■□□□□ 0.32
CNOT3-208ENST00000613073 GSC2O15499 205 aa17.05■□□□□ 0.32
CNOT3-208ENST00000613073 CD4P01730 458 aa17.05■□□□□ 0.32
CNOT3-208ENST00000613073 EIF3EP60228 445 aaKnown RBP17.05■□□□□ 0.32
CNOT3-208ENST00000613073 SLC6A3Q01959 620 aa17.05■□□□□ 0.32
CNOT3-208ENST00000613073 ACAP1Q15027 740 aa17.05■□□□□ 0.32
CNOT3-208ENST00000613073 ZRSR2Q15696 482 aaKnown RBP17.05■□□□□ 0.32
CNOT3-208ENST00000613073 CFAP157Q5JU67 520 aa17.05■□□□□ 0.32
CNOT3-208ENST00000613073 FAM71DQ8N9W8 422 aa17.05■□□□□ 0.32
CNOT3-208ENST00000613073 RFWD2Q8NHY2 731 aa17.05■□□□□ 0.32
CNOT3-208ENST00000613073 SPATA18Q8TC71 538 aa17.05■□□□□ 0.32
CNOT3-208ENST00000613073 DTNBP1Q96EV8 351 aa17.05■□□□□ 0.32
CNOT3-208ENST00000613073 SLC4A5Q9BY07 1137 aa17.05■□□□□ 0.32
CNOT3-208ENST00000613073 ZFYVE28Q9HCC9 887 aa17.05■□□□□ 0.32
CNOT3-208ENST00000613073 PHF24Q9UPV7 400 aa17.05■□□□□ 0.32
CNOT3-208ENST00000613073 RALGAPA2Q2PPJ7 1873 aa17.05■□□□□ 0.32
CNOT3-208ENST00000613073 EXOC1LA0A1B0GW35 172 aa17.05■□□□□ 0.32
CNOT3-208ENST00000613073 C2orf71A6NGG8 1288 aa17.05■□□□□ 0.32
CNOT3-208ENST00000613073 AKR1A1P14550 325 aa17.05■□□□□ 0.32
CNOT3-208ENST00000613073 SDC4P31431 198 aa17.05■□□□□ 0.32
CNOT3-208ENST00000613073 ATXN1P54253 815 aaKnown RBP17.05■□□□□ 0.32
CNOT3-208ENST00000613073 PKN2Q16513 984 aaKnown RBP17.05■□□□□ 0.32
CNOT3-208ENST00000613073 TAZQ16635 292 aa17.05■□□□□ 0.32
CNOT3-208ENST00000613073 PABPC1LQ4VXU2 614 aaKnown RBP17.05■□□□□ 0.32
CNOT3-208ENST00000613073 FAM47CQ5HY64 1035 aa17.05■□□□□ 0.32
CNOT3-208ENST00000613073 SYCP2LQ5T4T6 812 aa17.05■□□□□ 0.32
CNOT3-208ENST00000613073 C1orf228Q6PIY5 440 aa17.05■□□□□ 0.32
CNOT3-208ENST00000613073 TMEM110Q86TL2 294 aa17.05■□□□□ 0.32
CNOT3-208ENST00000613073 APPL2Q8NEU8 664 aa17.05■□□□□ 0.32
CNOT3-208ENST00000613073 SLC2A14Q8TDB8 520 aa17.05■□□□□ 0.32
CNOT3-208ENST00000613073 SH3TC2Q8TF17 1288 aa17.05■□□□□ 0.32
CNOT3-208ENST00000613073 LRRN4Q8WUT4 740 aa17.05■□□□□ 0.32
CNOT3-208ENST00000613073 TRABDQ9H4I3 376 aa17.05■□□□□ 0.32
CNOT3-208ENST00000613073 PCDH9Q9HC56 1237 aa17.05■□□□□ 0.32
CNOT3-208ENST00000613073 EFR3BQ9Y2G0 817 aa17.05■□□□□ 0.32
CNOT3-208ENST00000613073 TTC36A6NLP5 189 aa17.04■□□□□ 0.32
CNOT3-208ENST00000613073 BAG2O95816 211 aa17.04■□□□□ 0.32
CNOT3-208ENST00000613073 RBP3P10745 1247 aa17.04■□□□□ 0.32
CNOT3-208ENST00000613073 TAF6P49848 677 aa17.04■□□□□ 0.32
CNOT3-208ENST00000613073 AP1B1Q10567 949 aa17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms