RNA–Protein interactions for RNA: ENST00000612828.4

CNTNAP3B-211, Transcript of contactin associated protein like 3B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CNTNAP3B, Length 7,455 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3B-211ENST00000612828 SH3BP4Q9P0V3 963 aa11.11□□□□□ -0.63
CNTNAP3B-211ENST00000612828 K7ERI5 159 aa11.11□□□□□ -0.63
CNTNAP3B-211ENST00000612828 GTPBP1O00178 669 aaKnown RBP11.11□□□□□ -0.63
CNTNAP3B-211ENST00000612828 P4HA3Q7Z4N8 544 aa11.11□□□□□ -0.63
CNTNAP3B-211ENST00000612828 SATL1Q86VE3 508 aa11.11□□□□□ -0.63
CNTNAP3B-211ENST00000612828 NT5C1BQ96P26 610 aa11.11□□□□□ -0.63
CNTNAP3B-211ENST00000612828 METTL5Q9NRN9 209 aaKnown RBP11.11□□□□□ -0.63
CNTNAP3B-211ENST00000612828 C13orf42A0A1B0GVH6 325 aa11.11□□□□□ -0.63
CNTNAP3B-211ENST00000612828 PLGP00747 810 aaPredicted RBP11.11□□□□□ -0.63
CNTNAP3B-211ENST00000612828 LHCGRP22888 699 aa11.11□□□□□ -0.63
CNTNAP3B-211ENST00000612828 NUP107P57740 925 aa11.11□□□□□ -0.63
CNTNAP3B-211ENST00000612828 FMR1Q06787 632 aaKnown RBP eCLIP11.11□□□□□ -0.63
CNTNAP3B-211ENST00000612828 MTDHQ86UE4 582 aaKnown RBP11.11□□□□□ -0.63
CNTNAP3B-211ENST00000612828 HIST2H2ABQ8IUE6 130 aaPredicted RBP11.11□□□□□ -0.63
CNTNAP3B-211ENST00000612828 SLC43A2Q8N370 569 aa11.11□□□□□ -0.63
CNTNAP3B-211ENST00000612828 RDM1Q8NG50 284 aa11.11□□□□□ -0.63
CNTNAP3B-211ENST00000612828 BRF2Q9HAW0 419 aa11.11□□□□□ -0.63
CNTNAP3B-211ENST00000612828 PCSK1NQ9UHG2 260 aa11.11□□□□□ -0.63
CNTNAP3B-211ENST00000612828 KIAA1024Q9UPX6 916 aa11.11□□□□□ -0.63
CNTNAP3B-211ENST00000612828 NCK2O43639 380 aa11.11□□□□□ -0.63
CNTNAP3B-211ENST00000612828 FDPSP14324 419 aaKnown RBP11.11□□□□□ -0.63
CNTNAP3B-211ENST00000612828 MTAPQ13126 283 aa11.11□□□□□ -0.63
CNTNAP3B-211ENST00000612828 KRR1Q13601 381 aaKnown RBP11.11□□□□□ -0.63
CNTNAP3B-211ENST00000612828 KHDC1LQ5JSQ8 128 aa11.11□□□□□ -0.63
CNTNAP3B-211ENST00000612828 MFSD14BQ5SR56 506 aa11.11□□□□□ -0.63
CNTNAP3B-211ENST00000612828 CYP20A1Q6UW02 462 aa11.11□□□□□ -0.63
CNTNAP3B-211ENST00000612828 ANKRD7Q92527 254 aa11.11□□□□□ -0.63
CNTNAP3B-211ENST00000612828 BLOC1S6Q9UL45 172 aa11.11□□□□□ -0.63
CNTNAP3B-211ENST00000612828 PCDHGC3Q9UN70 934 aa11.11□□□□□ -0.63
CNTNAP3B-211ENST00000612828 NCOA3Q9Y6Q9 1424 aa11.11□□□□□ -0.63
CNTNAP3B-211ENST00000612828 KPNA3O00505 521 aaPredicted RBP11.1□□□□□ -0.63
CNTNAP3B-211ENST00000612828 GNB5O14775 395 aa11.1□□□□□ -0.63
CNTNAP3B-211ENST00000612828 PLOD3O60568 738 aa11.1□□□□□ -0.63
CNTNAP3B-211ENST00000612828 RNGTTO60942 597 aaKnown RBP11.1□□□□□ -0.63
CNTNAP3B-211ENST00000612828 KDSRQ06136 332 aa11.1□□□□□ -0.63
CNTNAP3B-211ENST00000612828 KCTD1Q719H9 257 aa11.1□□□□□ -0.63
CNTNAP3B-211ENST00000612828 TMPRSS9Q7Z410 1059 aa11.1□□□□□ -0.63
CNTNAP3B-211ENST00000612828 CCDC36Q8IYA8 594 aa11.1□□□□□ -0.63
CNTNAP3B-211ENST00000612828 PPM1NQ8N819 430 aa11.1□□□□□ -0.63
CNTNAP3B-211ENST00000612828 CYFIP2Q96F07 1278 aa11.1□□□□□ -0.63
CNTNAP3B-211ENST00000612828 PANX2Q96RD6 677 aa11.1□□□□□ -0.63
CNTNAP3B-211ENST00000612828 ARMC7Q9H6L4 198 aa11.1□□□□□ -0.63
CNTNAP3B-211ENST00000612828 CD209Q9NNX6 404 aa11.1□□□□□ -0.63
CNTNAP3B-211ENST00000612828 GRIP1Q9Y3R0 1128 aa11.1□□□□□ -0.63
CNTNAP3B-211ENST00000612828 SLC30A1Q9Y6M5 507 aa11.1□□□□□ -0.63
CNTNAP3B-211ENST00000612828 MYH9P35579 1960 aaKnown RBP11.1□□□□□ -0.63
CNTNAP3B-211ENST00000612828 USP17L3A6NCW0 530 aa11.1□□□□□ -0.63
CNTNAP3B-211ENST00000612828 USP17L4A6NCW7 530 aa11.1□□□□□ -0.63
CNTNAP3B-211ENST00000612828 INPP4BO15327 924 aa11.1□□□□□ -0.63
CNTNAP3B-211ENST00000612828 CALB2P22676 271 aa11.1□□□□□ -0.63
CNTNAP3B-211ENST00000612828 LIFRP42702 1097 aa11.1□□□□□ -0.63
CNTNAP3B-211ENST00000612828 MAPRE2Q15555 327 aa11.1□□□□□ -0.63
CNTNAP3B-211ENST00000612828 MFSD14CQ5VZR4 134 aa11.1□□□□□ -0.63
CNTNAP3B-211ENST00000612828 CENPUQ71F23 418 aa11.1□□□□□ -0.63
CNTNAP3B-211ENST00000612828 USP17L1Q7RTZ2 530 aa11.1□□□□□ -0.63
CNTNAP3B-211ENST00000612828 METTL6Q8TCB7 284 aa11.1□□□□□ -0.63
CNTNAP3B-211ENST00000612828 PPP1R16AQ96I34 528 aa11.1□□□□□ -0.63
CNTNAP3B-211ENST00000612828 NSMCE2Q96MF7 247 aa11.1□□□□□ -0.63
CNTNAP3B-211ENST00000612828 OSBPL1AQ9BXW6 950 aa11.1□□□□□ -0.63
CNTNAP3B-211ENST00000612828 ENY2Q9NPA8 101 aa11.1□□□□□ -0.63
CNTNAP3B-211ENST00000612828 NFU1Q9UMS0 254 aa11.1□□□□□ -0.63
CNTNAP3B-211ENST00000612828 MLH3Q9UHC1 1453 aa11.1□□□□□ -0.63
CNTNAP3B-211ENST00000612828 TRIM49D1C9J1S8 452 aa11.1□□□□□ -0.63
CNTNAP3B-211ENST00000612828 H3BN98 237 aa11.1□□□□□ -0.63
CNTNAP3B-211ENST00000612828 USP4Q13107 963 aa11.1□□□□□ -0.63
CNTNAP3B-211ENST00000612828 ZNF554Q86TJ5 538 aa11.1□□□□□ -0.63
CNTNAP3B-211ENST00000612828 NLRP10Q86W26 655 aa11.1□□□□□ -0.63
CNTNAP3B-211ENST00000612828 CHERPQ8IWX8 916 aaKnown RBP11.1□□□□□ -0.63
CNTNAP3B-211ENST00000612828 MB21D1Q8N884 522 aa11.1□□□□□ -0.63
CNTNAP3B-211ENST00000612828 PTPRHQ9HD43 1115 aa11.1□□□□□ -0.63
CNTNAP3B-211ENST00000612828 CMTM6Q9NX76 183 aa11.1□□□□□ -0.63
CNTNAP3B-211ENST00000612828 ADAMTS1Q9UHI8 967 aa11.1□□□□□ -0.63
CNTNAP3B-211ENST00000612828 MRPL11Q9Y3B7 192 aaKnown RBP11.1□□□□□ -0.63
CNTNAP3B-211ENST00000612828 TP73O15350 636 aa11.1□□□□□ -0.63
CNTNAP3B-211ENST00000612828 SIN3BO75182 1162 aa11.1□□□□□ -0.63
CNTNAP3B-211ENST00000612828 SCGB1D2O95969 90 aa11.1□□□□□ -0.63
CNTNAP3B-211ENST00000612828 ATP6V1B1P15313 513 aa11.1□□□□□ -0.63
CNTNAP3B-211ENST00000612828 DNAJB2P25686 324 aa11.1□□□□□ -0.63
CNTNAP3B-211ENST00000612828 OAZ1P54368 228 aa11.1□□□□□ -0.63
CNTNAP3B-211ENST00000612828 BYSLQ13895 437 aaKnown RBP11.1□□□□□ -0.63
CNTNAP3B-211ENST00000612828 UBE2R2Q712K3 238 aaPredicted RBP11.1□□□□□ -0.63
CNTNAP3B-211ENST00000612828 C12orf56Q8IXR9 622 aa11.1□□□□□ -0.63
CNTNAP3B-211ENST00000612828 CYP4Z2PQ8N1L4 340 aa11.1□□□□□ -0.63
CNTNAP3B-211ENST00000612828 TBCKQ8TEA7 893 aa11.1□□□□□ -0.63
CNTNAP3B-211ENST00000612828 ARMC5Q96C12 935 aa11.1□□□□□ -0.63
CNTNAP3B-211ENST00000612828 GSDMCQ9BYG8 508 aa11.1□□□□□ -0.63
CNTNAP3B-211ENST00000612828 ADPRHL2Q9NX46 363 aa11.1□□□□□ -0.63
CNTNAP3B-211ENST00000612828 TBC1D30Q9Y2I9 924 aa11.1□□□□□ -0.63
CNTNAP3B-211ENST00000612828 LRRC7Q96NW7 1537 aa11.1□□□□□ -0.63
CNTNAP3B-211ENST00000612828 UBE2Q2LH0YL09 131 aa11.1□□□□□ -0.63
CNTNAP3B-211ENST00000612828 IFRD1O00458 451 aaPredicted RBP11.1□□□□□ -0.63
CNTNAP3B-211ENST00000612828 MLLT1Q03111 559 aaPredicted RBP11.1□□□□□ -0.63
CNTNAP3B-211ENST00000612828 FAM76BQ5HYJ3 339 aa11.1□□□□□ -0.63
CNTNAP3B-211ENST00000612828 C3orf33Q6P1S2 294 aa11.1□□□□□ -0.63
CNTNAP3B-211ENST00000612828 ASB12Q8WXK4 309 aa11.1□□□□□ -0.63
CNTNAP3B-211ENST00000612828 EME1Q96AY2 570 aa11.1□□□□□ -0.63
CNTNAP3B-211ENST00000612828 ZNF512BQ96KM6 892 aaPredicted RBP11.1□□□□□ -0.63
CNTNAP3B-211ENST00000612828 HEMGNQ9BXL5 484 aa11.1□□□□□ -0.63
CNTNAP3B-211ENST00000612828 SHCBP1LQ9BZQ2 653 aa11.1□□□□□ -0.63
CNTNAP3B-211ENST00000612828 POU2F3Q9UKI9 436 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms