RNA–Protein interactions for RNA: ENST00000612672.1

MMP28-203, Transcript of matrix metallopeptidase 28, humanhuman

TSL 1 (best) BASIC

Gene MMP28, Length 1,092 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP28-203ENST00000612672 PLA2G4AP47712 749 aa24.63■■□□□ 1.53
MMP28-203ENST00000612672 KIF11P52732 1056 aa24.63■■□□□ 1.53
MMP28-203ENST00000612672 DBX2Q6ZNG2 339 aa24.63■■□□□ 1.53
MMP28-203ENST00000612672 SV2AQ7L0J3 742 aa24.63■■□□□ 1.53
MMP28-203ENST00000612672 TMPRSS7Q7RTY8 843 aa24.63■■□□□ 1.53
MMP28-203ENST00000612672 PCDHA5Q9Y5H7 936 aa24.63■■□□□ 1.53
MMP28-203ENST00000612672 ASXL3Q9C0F0 2248 aa24.62■■□□□ 1.53
MMP28-203ENST00000612672 PLXNA2O75051 1894 aa24.62■■□□□ 1.53
MMP28-203ENST00000612672 HLA-DRAP01903 254 aa24.62■■□□□ 1.53
MMP28-203ENST00000612672 ZNF883P0CG24 379 aa24.62■■□□□ 1.53
MMP28-203ENST00000612672 MATKP42679 507 aa24.62■■□□□ 1.53
MMP28-203ENST00000612672 AFMP43652 599 aa24.62■■□□□ 1.53
MMP28-203ENST00000612672 AP3M2P53677 418 aa24.62■■□□□ 1.53
MMP28-203ENST00000612672 INCA1Q0VD86 236 aa24.62■■□□□ 1.53
MMP28-203ENST00000612672 STK4Q13043 487 aa24.62■■□□□ 1.53
MMP28-203ENST00000612672 SGSM1Q2NKQ1 1148 aa24.62■■□□□ 1.53
MMP28-203ENST00000612672 CYFIP2Q96F07 1278 aa24.62■■□□□ 1.53
MMP28-203ENST00000612672 SIPA1Q96FS4 1042 aa24.62■■□□□ 1.53
MMP28-203ENST00000612672 KIAA1522Q9P206 1035 aaPredicted RBP24.62■■□□□ 1.53
MMP28-203ENST00000612672 RASAL2Q9UJF2 1139 aa24.62■■□□□ 1.53
MMP28-203ENST00000612672 STX6O43752 255 aa24.61■■□□□ 1.53
MMP28-203ENST00000612672 CUTAO60888 179 aa24.61■■□□□ 1.53
MMP28-203ENST00000612672 HLA-EP13747 358 aa24.61■■□□□ 1.53
MMP28-203ENST00000612672 CORO1AP31146 461 aaKnown RBP24.61■■□□□ 1.53
MMP28-203ENST00000612672 LAYNQ6UX15 382 aa24.61■■□□□ 1.53
MMP28-203ENST00000612672 CCDC186Q7Z3E2 898 aa24.61■■□□□ 1.53
MMP28-203ENST00000612672 FAM124AQ86V42 546 aa24.61■■□□□ 1.53
MMP28-203ENST00000612672 KCTD10Q9H3F6 313 aa24.61■■□□□ 1.53
MMP28-203ENST00000612672 ZSCAN16Q9H4T2 348 aaPredicted RBP24.61■■□□□ 1.53
MMP28-203ENST00000612672 C6orf106Q9H6K1 298 aaPredicted RBP24.61■■□□□ 1.53
MMP28-203ENST00000612672 UPF2Q9HAU5 1272 aaKnown RBP24.61■■□□□ 1.53
MMP28-203ENST00000612672 AGO1Q9UL18 857 aaKnown RBP24.61■■□□□ 1.53
MMP28-203ENST00000612672 USP3Q9Y6I4 520 aa24.61■■□□□ 1.53
MMP28-203ENST00000612672 GOLGA8CPA6NN73 597 aa24.6■■□□□ 1.53
MMP28-203ENST00000612672 CER1O95813 267 aa24.6■■□□□ 1.53
MMP28-203ENST00000612672 CSNK1EP49674 416 aaKnown RBP24.6■■□□□ 1.53
MMP28-203ENST00000612672 EFEMP1Q12805 493 aa24.6■■□□□ 1.53
MMP28-203ENST00000612672 CAMK2BQ13554 666 aa24.6■■□□□ 1.53
MMP28-203ENST00000612672 SLC9A9Q8IVB4 645 aa24.6■■□□□ 1.53
MMP28-203ENST00000612672 LRIG1Q96JA1 1093 aa24.6■■□□□ 1.53
MMP28-203ENST00000612672 PNPLA8Q9NP80 782 aa24.6■■□□□ 1.53
MMP28-203ENST00000612672 ELOVL2Q9NXB9 296 aa24.6■■□□□ 1.53
MMP28-203ENST00000612672 PVALEFA0A1B0GWK0 134 aa24.59■■□□□ 1.53
MMP28-203ENST00000612672 FAM149AA5PLN7 773 aa24.59■■□□□ 1.53
MMP28-203ENST00000612672 P4HA1P13674 534 aa24.59■■□□□ 1.53
MMP28-203ENST00000612672 PIK3CAP42336 1068 aa24.59■■□□□ 1.53
MMP28-203ENST00000612672 KIF19Q2TAC6 998 aa24.59■■□□□ 1.53
MMP28-203ENST00000612672 PPP1R26Q5T8A7 1209 aaPredicted RBP24.59■■□□□ 1.53
MMP28-203ENST00000612672 ANKS1BQ7Z6G8 1248 aa24.59■■□□□ 1.53
MMP28-203ENST00000612672 PRCCQ92733 491 aaPredicted RBP24.59■■□□□ 1.53
MMP28-203ENST00000612672 BACH2Q9BYV9 841 aa24.59■■□□□ 1.53
MMP28-203ENST00000612672 MAGEF1Q9HAY2 307 aa24.59■■□□□ 1.53
MMP28-203ENST00000612672 WDR3Q9UNX4 943 aaKnown RBP eCLIP24.59■■□□□ 1.53
MMP28-203ENST00000612672 CFAP46Q8IYW2 2715 aa24.58■■□□□ 1.53
MMP28-203ENST00000612672 RPN1P04843 607 aaKnown RBP24.58■■□□□ 1.53
MMP28-203ENST00000612672 OXTRP30559 389 aa24.58■■□□□ 1.53
MMP28-203ENST00000612672 ACSL1P33121 698 aa24.58■■□□□ 1.53
MMP28-203ENST00000612672 KCNT1Q5JUK3 1230 aa24.58■■□□□ 1.53
MMP28-203ENST00000612672 DENND1CQ8IV53 801 aa24.58■■□□□ 1.53
MMP28-203ENST00000612672 ZNF276Q8N554 614 aa24.58■■□□□ 1.53
MMP28-203ENST00000612672 ZNF366Q8N895 744 aa24.58■■□□□ 1.53
MMP28-203ENST00000612672 RHBDD1Q8TEB9 315 aa24.58■■□□□ 1.53
MMP28-203ENST00000612672 TAF4BQ92750 862 aa24.58■■□□□ 1.53
MMP28-203ENST00000612672 SNX11Q9Y5W9 270 aa24.58■■□□□ 1.53
MMP28-203ENST00000612672 ASH1LQ9NR48 2969 aaKnown RBP24.57■■□□□ 1.52
MMP28-203ENST00000612672 KCNK3O14649 394 aa24.57■■□□□ 1.52
MMP28-203ENST00000612672 SYNCRIPO60506 623 aaKnown RBP24.57■■□□□ 1.52
MMP28-203ENST00000612672 YEATS4O95619 227 aa24.57■■□□□ 1.52
MMP28-203ENST00000612672 NR3C1P04150 777 aa24.57■■□□□ 1.52
MMP28-203ENST00000612672 EPHX1P07099 455 aa24.57■■□□□ 1.52
MMP28-203ENST00000612672 CD58P19256 250 aa24.57■■□□□ 1.52
MMP28-203ENST00000612672 ZNF132P52740 706 aa24.57■■□□□ 1.52
MMP28-203ENST00000612672 CYP4F3Q08477 520 aa24.57■■□□□ 1.52
MMP28-203ENST00000612672 TMC2Q8TDI7 906 aa24.57■■□□□ 1.52
MMP28-203ENST00000612672 TAS1R2Q8TE23 839 aa24.57■■□□□ 1.52
MMP28-203ENST00000612672 TMEM174Q8WUU8 243 aa24.57■■□□□ 1.52
MMP28-203ENST00000612672 SNX19Q92543 992 aa24.57■■□□□ 1.52
MMP28-203ENST00000612672 NUP58Q9BVL2 599 aa24.57■■□□□ 1.52
MMP28-203ENST00000612672 NT5C1AQ9BXI3 368 aa24.57■■□□□ 1.52
MMP28-203ENST00000612672 CIPCQ9C0C6 399 aa24.57■■□□□ 1.52
MMP28-203ENST00000612672 SCUBE2Q9NQ36 999 aa24.57■■□□□ 1.52
MMP28-203ENST00000612672 CLIC5Q9NZA1 410 aa24.57■■□□□ 1.52
MMP28-203ENST00000612672 DKK4Q9UBT3 224 aa24.57■■□□□ 1.52
MMP28-203ENST00000612672 PCDHGB2Q9Y5G2 931 aa24.57■■□□□ 1.52
MMP28-203ENST00000612672 FLNBO75369 2602 aaKnown RBP24.57■■□□□ 1.52
MMP28-203ENST00000612672 NPC1O15118 1278 aa24.56■■□□□ 1.52
MMP28-203ENST00000612672 FLRT2O43155 660 aa24.56■■□□□ 1.52
MMP28-203ENST00000612672 ZIC2O95409 532 aaPredicted RBP24.56■■□□□ 1.52
MMP28-203ENST00000612672 TRIM49P0CI25 452 aa24.56■■□□□ 1.52
MMP28-203ENST00000612672 TRIM49CP0CI26 452 aa24.56■■□□□ 1.52
MMP28-203ENST00000612672 FOXD4L5Q5VV16 416 aaPredicted RBP24.56■■□□□ 1.52
MMP28-203ENST00000612672 FAM217AQ8IXS0 508 aa24.56■■□□□ 1.52
MMP28-203ENST00000612672 ZC3H3Q8IXZ2 948 aaKnown RBP24.56■■□□□ 1.52
MMP28-203ENST00000612672 GOLGA5Q8TBA6 731 aa24.56■■□□□ 1.52
MMP28-203ENST00000612672 FOXD4L4Q8WXT5 416 aaPredicted RBP24.56■■□□□ 1.52
MMP28-203ENST00000612672 INTS4Q96HW7 963 aaKnown RBP24.56■■□□□ 1.52
MMP28-203ENST00000612672 DUSP16Q9BY84 665 aa24.56■■□□□ 1.52
MMP28-203ENST00000612672 ZNF510Q9Y2H8 683 aa24.56■■□□□ 1.52
MMP28-203ENST00000612672 TRABD2BA6NFA1 517 aa24.55■■□□□ 1.52
MMP28-203ENST00000612672 KIF20AO95235 890 aa24.55■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms