RNA–Protein interactions for RNA: ENST00000611733.4

CLK4-215, Transcript of CDC like kinase 4, humanhuman

TSL 5 BASIC

Gene CLK4, Length 2,182 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-215ENST00000611733 CCDC185Q8N715 623 aa12.55□□□□□ -0.4
CLK4-215ENST00000611733 ZSCAN18Q8TBC5 510 aaPredicted RBP12.55□□□□□ -0.4
CLK4-215ENST00000611733 USP13Q92995 863 aaPredicted RBP12.55□□□□□ -0.4
CLK4-215ENST00000611733 RSPRY1Q96DX4 576 aa12.55□□□□□ -0.4
CLK4-215ENST00000611733 SLC39A13Q96H72 371 aa12.55□□□□□ -0.4
CLK4-215ENST00000611733 FCRL2Q96LA5 508 aaPredicted RBP12.55□□□□□ -0.4
CLK4-215ENST00000611733 TRIM62Q9BVG3 475 aa12.55□□□□□ -0.4
CLK4-215ENST00000611733 KCND1Q9NSA2 647 aa12.55□□□□□ -0.4
CLK4-215ENST00000611733 OLA1Q9NTK5 396 aaKnown RBP12.55□□□□□ -0.4
CLK4-215ENST00000611733 PACSIN2Q9UNF0 486 aaPredicted RBP12.55□□□□□ -0.4
CLK4-215ENST00000611733 UNC80Q8N2C7 3258 aa12.55□□□□□ -0.4
CLK4-215ENST00000611733 KLKB1P03952 638 aa12.54□□□□□ -0.4
CLK4-215ENST00000611733 VIPR2P41587 438 aa12.54□□□□□ -0.4
CLK4-215ENST00000611733 CXCR3P49682 368 aa12.54□□□□□ -0.4
CLK4-215ENST00000611733 TBX4P57082 545 aa12.54□□□□□ -0.4
CLK4-215ENST00000611733 SLC7A9P82251 487 aa12.54□□□□□ -0.4
CLK4-215ENST00000611733 STRADAQ7RTN6 431 aa12.54□□□□□ -0.4
CLK4-215ENST00000611733 SLFN11Q7Z7L1 901 aa12.54□□□□□ -0.4
CLK4-215ENST00000611733 NIPA2Q8N8Q9 360 aa12.54□□□□□ -0.4
CLK4-215ENST00000611733 ACSF2Q96CM8 615 aaPredicted RBP12.54□□□□□ -0.4
CLK4-215ENST00000611733 PGAP3Q96FM1 320 aaPredicted RBP12.54□□□□□ -0.4
CLK4-215ENST00000611733 GPATCH2LQ9NWQ4 482 aa12.54□□□□□ -0.4
CLK4-215ENST00000611733 SNX10Q9Y5X0 201 aa12.54□□□□□ -0.4
CLK4-215ENST00000611733 GREM1O60565 184 aa12.54□□□□□ -0.4
CLK4-215ENST00000611733 STC2O76061 302 aa12.54□□□□□ -0.4
CLK4-215ENST00000611733 GBP2P32456 591 aaPredicted RBP12.54□□□□□ -0.4
CLK4-215ENST00000611733 RDXP35241 583 aaKnown RBP12.54□□□□□ -0.4
CLK4-215ENST00000611733 AVPR1AP37288 418 aa12.54□□□□□ -0.4
CLK4-215ENST00000611733 SSR1P43307 286 aaKnown RBP12.54□□□□□ -0.4
CLK4-215ENST00000611733 TRIP4Q15650 581 aaPredicted RBP12.54□□□□□ -0.4
CLK4-215ENST00000611733 KCNT1Q5JUK3 1230 aa12.54□□□□□ -0.4
CLK4-215ENST00000611733 CDK5RAP1Q96SZ6 601 aaKnown RBP12.54□□□□□ -0.4
CLK4-215ENST00000611733 ZWILCHQ9H900 591 aa12.54□□□□□ -0.4
CLK4-215ENST00000611733 RRN3Q9NYV6 651 aa12.54□□□□□ -0.4
CLK4-215ENST00000611733 CDH7Q9ULB5 785 aa12.54□□□□□ -0.4
CLK4-215ENST00000611733 TLR6Q9Y2C9 796 aa12.54□□□□□ -0.4
CLK4-215ENST00000611733 DENND4CQ5VZ89 1909 aa12.54□□□□□ -0.4
CLK4-215ENST00000611733 COL6A3P12111 3177 aa12.54□□□□□ -0.4
CLK4-215ENST00000611733 LEFTY2O00292 366 aa12.53□□□□□ -0.4
CLK4-215ENST00000611733 RNF8O76064 485 aa12.53□□□□□ -0.4
CLK4-215ENST00000611733 MOCS2O96007 188 aaPredicted RBP12.53□□□□□ -0.4
CLK4-215ENST00000611733 IGLV3-27P01718 113 aa12.53□□□□□ -0.4
CLK4-215ENST00000611733 DDX6P26196 483 aaKnown RBP eCLIP12.53□□□□□ -0.4
CLK4-215ENST00000611733 GBP1P32455 592 aa12.53□□□□□ -0.4
CLK4-215ENST00000611733 GJC1P36383 396 aa12.53□□□□□ -0.4
CLK4-215ENST00000611733 GGCXP38435 758 aa12.53□□□□□ -0.4
CLK4-215ENST00000611733 MARCKSL1P49006 195 aa12.53□□□□□ -0.4
CLK4-215ENST00000611733 SMAD4Q13485 552 aaKnown RBP12.53□□□□□ -0.4
CLK4-215ENST00000611733 CA9Q16790 459 aa12.53□□□□□ -0.4
CLK4-215ENST00000611733 SMTNL2Q2TAL5 461 aa12.53□□□□□ -0.4
CLK4-215ENST00000611733 ZNF569Q5MCW4 686 aa12.53□□□□□ -0.4
CLK4-215ENST00000611733 TADA2BQ86TJ2 420 aa12.53□□□□□ -0.4
CLK4-215ENST00000611733 NT5DC3Q86UY8 548 aa12.53□□□□□ -0.4
CLK4-215ENST00000611733 SH3RF2Q8TEC5 729 aa12.53□□□□□ -0.4
CLK4-215ENST00000611733 RNF34Q969K3 372 aa12.53□□□□□ -0.4
CLK4-215ENST00000611733 ASB16Q96NS5 453 aa12.53□□□□□ -0.4
CLK4-215ENST00000611733 SERPINB11Q96P15 392 aa12.53□□□□□ -0.4
CLK4-215ENST00000611733 TKTL2Q9H0I9 626 aa12.53□□□□□ -0.4
CLK4-215ENST00000611733 WDCPQ9H6R7 721 aa12.53□□□□□ -0.4
CLK4-215ENST00000611733 TDP1Q9NUW8 608 aa12.53□□□□□ -0.4
CLK4-215ENST00000611733 CFAP97Q9P2B7 532 aa12.53□□□□□ -0.4
CLK4-215ENST00000611733 USP18Q9UMW8 372 aa12.53□□□□□ -0.4
CLK4-215ENST00000611733 GOLGA6L7A0A1B0GV03 622 aa12.53□□□□□ -0.4
CLK4-215ENST00000611733 KCNU1A8MYU2 1149 aa12.53□□□□□ -0.4
CLK4-215ENST00000611733 FANCGO15287 622 aa12.53□□□□□ -0.4
CLK4-215ENST00000611733 LAMP2P13473 410 aa12.53□□□□□ -0.4
CLK4-215ENST00000611733 SLC25A11Q02978 314 aaKnown RBP12.53□□□□□ -0.4
CLK4-215ENST00000611733 LEXMQ3ZCV2 418 aa12.53□□□□□ -0.4
CLK4-215ENST00000611733 TANGO2Q6ICL3 276 aa12.53□□□□□ -0.4
CLK4-215ENST00000611733 C11orf63Q6NUN7 778 aa12.53□□□□□ -0.4
CLK4-215ENST00000611733 PYROXD2Q8N2H3 581 aa12.53□□□□□ -0.4
CLK4-215ENST00000611733 SLC35F6Q8N357 371 aa12.53□□□□□ -0.4
CLK4-215ENST00000611733 KRT35Q92764 455 aa12.53□□□□□ -0.4
CLK4-215ENST00000611733 RPP25Q9BUL9 199 aaKnown RBP12.53□□□□□ -0.4
CLK4-215ENST00000611733 PLA2G2FQ9BZM2 168 aa12.53□□□□□ -0.4
CLK4-215ENST00000611733 ARHGAP26Q9UNA1 814 aa12.53□□□□□ -0.4
CLK4-215ENST00000611733 SPOPO43791 374 aa12.52□□□□□ -0.4
CLK4-215ENST00000611733 F9P00740 461 aa12.52□□□□□ -0.4
CLK4-215ENST00000611733 FCARP24071 287 aa12.52□□□□□ -0.4
CLK4-215ENST00000611733 MAN1A1P33908 653 aa12.52□□□□□ -0.4
CLK4-215ENST00000611733 ADRA1BP35368 520 aa12.52□□□□□ -0.4
CLK4-215ENST00000611733 PCK1P35558 622 aa12.52□□□□□ -0.4
CLK4-215ENST00000611733 COG7P83436 770 aa12.52□□□□□ -0.4
CLK4-215ENST00000611733 ACAP1Q15027 740 aa12.52□□□□□ -0.4
CLK4-215ENST00000611733 PARM1Q6UWI2 310 aa12.52□□□□□ -0.4
CLK4-215ENST00000611733 ZSCAN30Q86W11 494 aa12.52□□□□□ -0.4
CLK4-215ENST00000611733 DENND1CQ8IV53 801 aa12.52□□□□□ -0.4
CLK4-215ENST00000611733 CD101Q93033 1021 aa12.52□□□□□ -0.4
CLK4-215ENST00000611733 WDR24Q96S15 920 aa12.52□□□□□ -0.4
CLK4-215ENST00000611733 KLHL11Q9NVR0 708 aa12.52□□□□□ -0.4
CLK4-215ENST00000611733 GDE1Q9NZC3 331 aa12.52□□□□□ -0.4
CLK4-215ENST00000611733 HBS1LQ9Y450 684 aaKnown RBP12.52□□□□□ -0.4
CLK4-215ENST00000611733 FAM72CH0Y354 149 aa12.52□□□□□ -0.41
CLK4-215ENST00000611733 ENC1O14682 589 aa12.52□□□□□ -0.41
CLK4-215ENST00000611733 RARAP10276 462 aa12.52□□□□□ -0.41
CLK4-215ENST00000611733 IL9P15248 144 aa12.52□□□□□ -0.41
CLK4-215ENST00000611733 CORO1AP31146 461 aaKnown RBP12.52□□□□□ -0.41
CLK4-215ENST00000611733 CCR1P32246 355 aa12.52□□□□□ -0.41
CLK4-215ENST00000611733 DNA2P51530 1060 aa12.52□□□□□ -0.41
CLK4-215ENST00000611733 IFI16Q16666 785 aaKnown RBP12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms