RNA–Protein interactions for RNA: ENST00000611068.1

RTN1-209, Transcript of reticulon 1, humanhuman

TSL 5 BASIC

Gene RTN1, Length 2,647 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN1-209ENST00000611068 C18orf8Q96DM3 657 aa16.52■□□□□ 0.24
RTN1-209ENST00000611068 HES6Q96HZ4 224 aa16.52■□□□□ 0.24
RTN1-209ENST00000611068 CYTH2Q99418 400 aa16.52■□□□□ 0.24
RTN1-209ENST00000611068 NOD1Q9Y239 953 aa16.52■□□□□ 0.24
RTN1-209ENST00000611068 CITO14578 2027 aa16.52■□□□□ 0.24
RTN1-209ENST00000611068 SCN1AP35498 2009 aa16.52■□□□□ 0.24
RTN1-209ENST00000611068 SMIM28A0A1B0GU29 152 aa16.52■□□□□ 0.23
RTN1-209ENST00000611068 DDX3YO15523 660 aaKnown RBP16.52■□□□□ 0.23
RTN1-209ENST00000611068 KRT38O76015 456 aa16.52■□□□□ 0.23
RTN1-209ENST00000611068 NDST1P52848 882 aa16.52■□□□□ 0.23
RTN1-209ENST00000611068 RBP5P82980 135 aa16.52■□□□□ 0.23
RTN1-209ENST00000611068 SRRM1Q8IYB3 904 aaKnown RBP16.52■□□□□ 0.23
RTN1-209ENST00000611068 WDTC1Q8N5D0 677 aa16.52■□□□□ 0.23
RTN1-209ENST00000611068 SMG8Q8ND04 991 aaKnown RBP16.52■□□□□ 0.23
RTN1-209ENST00000611068 MRPL45Q9BRJ2 306 aaKnown RBP16.52■□□□□ 0.23
RTN1-209ENST00000611068 BTBD10Q9BSF8 475 aa16.52■□□□□ 0.23
RTN1-209ENST00000611068 ARL8BQ9NVJ2 186 aa16.52■□□□□ 0.23
RTN1-209ENST00000611068 GTF3C4Q9UKN8 822 aa16.52■□□□□ 0.23
RTN1-209ENST00000611068 GOLGA8SH3BPF8 625 aa16.51■□□□□ 0.23
RTN1-209ENST00000611068 PDGFRBP09619 1106 aa16.51■□□□□ 0.23
RTN1-209ENST00000611068 ACAD11Q709F0 780 aa16.51■□□□□ 0.23
RTN1-209ENST00000611068 MON1BQ7L1V2 547 aa16.51■□□□□ 0.23
RTN1-209ENST00000611068 SLC4A11Q8NBS3 891 aa16.51■□□□□ 0.23
RTN1-209ENST00000611068 HESX1Q9UBX0 185 aa16.51■□□□□ 0.23
RTN1-209ENST00000611068 CNTN6Q9UQ52 1028 aa16.51■□□□□ 0.23
RTN1-209ENST00000611068 STK10O94804 968 aaKnown RBP16.51■□□□□ 0.23
RTN1-209ENST00000611068 ANPEPP15144 967 aa16.51■□□□□ 0.23
RTN1-209ENST00000611068 CD52P31358 61 aa16.51■□□□□ 0.23
RTN1-209ENST00000611068 SERPINB8P50452 374 aa16.51■□□□□ 0.23
RTN1-209ENST00000611068 TBL3Q12788 808 aaKnown RBP16.51■□□□□ 0.23
RTN1-209ENST00000611068 C16orf87Q6PH81 154 aa16.51■□□□□ 0.23
RTN1-209ENST00000611068 CLNKQ7Z7G1 428 aa16.51■□□□□ 0.23
RTN1-209ENST00000611068 ZBED8Q8IZ13 594 aa16.51■□□□□ 0.23
RTN1-209ENST00000611068 ZNF296Q8WUU4 475 aaPredicted RBP16.51■□□□□ 0.23
RTN1-209ENST00000611068 TRPV6Q9H1D0 765 aa16.51■□□□□ 0.23
RTN1-209ENST00000611068 FAM49BQ9NUQ9 324 aa16.51■□□□□ 0.23
RTN1-209ENST00000611068 PCDH10Q9P2E7 1040 aa16.51■□□□□ 0.23
RTN1-209ENST00000611068 CYTH4Q9UIA0 394 aa16.51■□□□□ 0.23
RTN1-209ENST00000611068 DOLKQ9UPQ8 538 aa16.51■□□□□ 0.23
RTN1-209ENST00000611068 SEC23IPQ9Y6Y8 1000 aaKnown RBP16.51■□□□□ 0.23
RTN1-209ENST00000611068 RARGP13631 454 aa16.5■□□□□ 0.23
RTN1-209ENST00000611068 CRABP2P29373 138 aa16.5■□□□□ 0.23
RTN1-209ENST00000611068 CENPCQ03188 943 aa16.5■□□□□ 0.23
RTN1-209ENST00000611068 IRF5Q13568 498 aa16.5■□□□□ 0.23
RTN1-209ENST00000611068 KCTD21Q4G0X4 260 aa16.5■□□□□ 0.23
RTN1-209ENST00000611068 MCUR1Q96AQ8 359 aa16.5■□□□□ 0.23
RTN1-209ENST00000611068 TTC1Q99614 292 aa16.5■□□□□ 0.23
RTN1-209ENST00000611068 KLHL11Q9NVR0 708 aa16.5■□□□□ 0.23
RTN1-209ENST00000611068 NKIRAS1Q9NYS0 192 aa16.5■□□□□ 0.23
RTN1-209ENST00000611068 HEMK1Q9Y5R4 338 aaPredicted RBP16.5■□□□□ 0.23
RTN1-209ENST00000611068 GYG2O15488 501 aa16.5■□□□□ 0.23
RTN1-209ENST00000611068 CDC42EP1Q00587 391 aa16.5■□□□□ 0.23
RTN1-209ENST00000611068 ITGA9Q13797 1035 aa16.5■□□□□ 0.23
RTN1-209ENST00000611068 CCDC142Q17RM4 750 aa16.5■□□□□ 0.23
RTN1-209ENST00000611068 LRRC36Q1X8D7 754 aa16.5■□□□□ 0.23
RTN1-209ENST00000611068 TAF2Q6P1X5 1199 aa16.5■□□□□ 0.23
RTN1-209ENST00000611068 ARHGEF18Q6ZSZ5 1173 aa16.5■□□□□ 0.23
RTN1-209ENST00000611068 ACOT1Q86TX2 421 aa16.5■□□□□ 0.23
RTN1-209ENST00000611068 HNRNPABQ99729 332 aaKnown RBP16.5■□□□□ 0.23
RTN1-209ENST00000611068 BCO2Q9BYV7 579 aa16.5■□□□□ 0.23
RTN1-209ENST00000611068 ROPN1BQ9BZX4 212 aaPredicted RBP16.5■□□□□ 0.23
RTN1-209ENST00000611068 ROPN1Q9HAT0 212 aaPredicted RBP16.5■□□□□ 0.23
RTN1-209ENST00000611068 UBN1Q9NPG3 1134 aa16.5■□□□□ 0.23
RTN1-209ENST00000611068 TBCCD1Q9NVR7 557 aa16.5■□□□□ 0.23
RTN1-209ENST00000611068 ZNF148Q9UQR1 794 aa16.5■□□□□ 0.23
RTN1-209ENST00000611068 CCDC22O60826 627 aa16.49■□□□□ 0.23
RTN1-209ENST00000611068 BAG2O95816 211 aa16.49■□□□□ 0.23
RTN1-209ENST00000611068 HMGCRP04035 888 aa16.49■□□□□ 0.23
RTN1-209ENST00000611068 INHAP05111 366 aa16.49■□□□□ 0.23
RTN1-209ENST00000611068 HOXC8P31273 242 aa16.49■□□□□ 0.23
RTN1-209ENST00000611068 MAMLD1Q13495 774 aa16.49■□□□□ 0.23
RTN1-209ENST00000611068 C1orf228Q6PIY5 440 aa16.49■□□□□ 0.23
RTN1-209ENST00000611068 RAPH1Q70E73 1250 aa16.49■□□□□ 0.23
RTN1-209ENST00000611068 NLRP9Q7RTR0 991 aa16.49■□□□□ 0.23
RTN1-209ENST00000611068 ZNF677Q86XU0 584 aa16.49■□□□□ 0.23
RTN1-209ENST00000611068 ACSF2Q96CM8 615 aaPredicted RBP16.49■□□□□ 0.23
RTN1-209ENST00000611068 PRR11Q96HE9 360 aaPredicted RBP16.49■□□□□ 0.23
RTN1-209ENST00000611068 PRICKLE1Q96MT3 831 aaPredicted RBP16.49■□□□□ 0.23
RTN1-209ENST00000611068 UPF3AQ9H1J1 476 aaKnown RBP16.49■□□□□ 0.23
RTN1-209ENST00000611068 CDC42EP4Q9H3Q1 356 aaKnown RBP16.49■□□□□ 0.23
RTN1-209ENST00000611068 MTRF1LQ9UGC7 380 aaKnown RBP16.49■□□□□ 0.23
RTN1-209ENST00000611068 ITGA11Q9UKX5 1188 aa16.49■□□□□ 0.23
RTN1-209ENST00000611068 NME7Q9Y5B8 376 aa16.49■□□□□ 0.23
RTN1-209ENST00000611068 TCRBV7S2A1N4TA0A589 114 aa16.49■□□□□ 0.23
RTN1-209ENST00000611068 TCF4P15884 667 aa16.49■□□□□ 0.23
RTN1-209ENST00000611068 PTGIRP43119 386 aa16.49■□□□□ 0.23
RTN1-209ENST00000611068 NAA20P61599 178 aa16.49■□□□□ 0.23
RTN1-209ENST00000611068 COG7P83436 770 aa16.49■□□□□ 0.23
RTN1-209ENST00000611068 PDE1BQ01064 536 aa16.49■□□□□ 0.23
RTN1-209ENST00000611068 RELAQ04206 551 aa16.49■□□□□ 0.23
RTN1-209ENST00000611068 C6orf183Q5T699 404 aa16.49■□□□□ 0.23
RTN1-209ENST00000611068 Q6ZNX1 250 aa16.49■□□□□ 0.23
RTN1-209ENST00000611068 SERINC5Q86VE9 423 aa16.49■□□□□ 0.23
RTN1-209ENST00000611068 VPS52Q8N1B4 723 aa16.49■□□□□ 0.23
RTN1-209ENST00000611068 TMEM176AQ96HP8 235 aa16.49■□□□□ 0.23
RTN1-209ENST00000611068 SERPINB12Q96P63 405 aa16.49■□□□□ 0.23
RTN1-209ENST00000611068 GAD1Q99259 594 aa16.49■□□□□ 0.23
RTN1-209ENST00000611068 DPEP3Q9H4B8 488 aa16.49■□□□□ 0.23
RTN1-209ENST00000611068 TIMMDC1Q9NPL8 285 aa16.49■□□□□ 0.23
RTN1-209ENST00000611068 TRPV2Q9Y5S1 764 aa16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms