RNA–Protein interactions for RNA: ENST00000610556.4

SYNPO2-206, Transcript of synaptopodin 2, humanhuman

TSL 1 (best) BASIC

Gene SYNPO2, Length 3,934 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-206ENST00000610556 SSX2IPQ9Y2D8 614 aa7.08□□□□□ -1.28
SYNPO2-206ENST00000610556 C2CD2Q9Y426 696 aa7.08□□□□□ -1.28
SYNPO2-206ENST00000610556 CDY2AQ9Y6F7 541 aa7.08□□□□□ -1.28
SYNPO2-206ENST00000610556 CDY1Q9Y6F8 540 aa7.08□□□□□ -1.28
SYNPO2-206ENST00000610556 PDE4DIPQ5VU43 2346 aa7.07□□□□□ -1.28
SYNPO2-206ENST00000610556 COL4A1P02462 1669 aa7.07□□□□□ -1.28
SYNPO2-206ENST00000610556 PMM2O15305 246 aa7.07□□□□□ -1.28
SYNPO2-206ENST00000610556 GAS2O43903 313 aaKnown RBP7.07□□□□□ -1.28
SYNPO2-206ENST00000610556 PEX11AO75192 247 aa7.07□□□□□ -1.28
SYNPO2-206ENST00000610556 PMPCBO75439 489 aa7.07□□□□□ -1.28
SYNPO2-206ENST00000610556 TCEA3O75764 348 aa7.07□□□□□ -1.28
SYNPO2-206ENST00000610556 JCHAINP01591 159 aa7.07□□□□□ -1.28
SYNPO2-206ENST00000610556 TBL3Q12788 808 aaKnown RBP7.07□□□□□ -1.28
SYNPO2-206ENST00000610556 KLF1Q13351 362 aaPredicted RBP7.07□□□□□ -1.28
SYNPO2-206ENST00000610556 PDE1CQ14123 709 aaPredicted RBP7.07□□□□□ -1.28
SYNPO2-206ENST00000610556 ANKRD20A4Q4UJ75 823 aa7.07□□□□□ -1.28
SYNPO2-206ENST00000610556 RNF220Q5VTB9 566 aa7.07□□□□□ -1.28
SYNPO2-206ENST00000610556 MTHFD1LQ6UB35 978 aa7.07□□□□□ -1.28
SYNPO2-206ENST00000610556 DLK2Q6UY11 383 aa7.07□□□□□ -1.28
SYNPO2-206ENST00000610556 XYLT1Q86Y38 959 aa7.07□□□□□ -1.28
SYNPO2-206ENST00000610556 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP7.07□□□□□ -1.28
SYNPO2-206ENST00000610556 C1orf127Q8N9H9 656 aa7.07□□□□□ -1.28
SYNPO2-206ENST00000610556 SLC35B2Q8TB61 432 aa7.07□□□□□ -1.28
SYNPO2-206ENST00000610556 PTPRN2Q92932 1015 aa7.07□□□□□ -1.28
SYNPO2-206ENST00000610556 FAM136AQ96C01 138 aa7.07□□□□□ -1.28
SYNPO2-206ENST00000610556 NMD3Q96D46 503 aaKnown RBP7.07□□□□□ -1.28
SYNPO2-206ENST00000610556 CELF6Q96J87 481 aaKnown RBP7.07□□□□□ -1.28
SYNPO2-206ENST00000610556 OSMRQ99650 979 aa7.07□□□□□ -1.28
SYNPO2-206ENST00000610556 STRA6Q9BX79 667 aa7.07□□□□□ -1.28
SYNPO2-206ENST00000610556 PHACTR1Q9C0D0 580 aa7.07□□□□□ -1.28
SYNPO2-206ENST00000610556 CCDC68Q9H2F9 335 aa7.07□□□□□ -1.28
SYNPO2-206ENST00000610556 EBF2Q9HAK2 575 aa7.07□□□□□ -1.28
SYNPO2-206ENST00000610556 IL1RL2Q9HB29 575 aa7.07□□□□□ -1.28
SYNPO2-206ENST00000610556 TSR3Q9UJK0 312 aaKnown RBP7.07□□□□□ -1.28
SYNPO2-206ENST00000610556 TIMM13Q9Y5L4 95 aaPredicted RBP7.07□□□□□ -1.28
SYNPO2-206ENST00000610556 CLUHO75153 1309 aa7.07□□□□□ -1.28
SYNPO2-206ENST00000610556 ASB14A6NK59 587 aa7.07□□□□□ -1.28
SYNPO2-206ENST00000610556 C3orf70A6NLC5 250 aaPredicted RBP7.07□□□□□ -1.28
SYNPO2-206ENST00000610556 CHADO15335 359 aa7.07□□□□□ -1.28
SYNPO2-206ENST00000610556 TPST1O60507 370 aa7.07□□□□□ -1.28
SYNPO2-206ENST00000610556 SEC24DO94855 1032 aaPredicted RBP7.07□□□□□ -1.28
SYNPO2-206ENST00000610556 FARP2O94887 1054 aaPredicted RBP7.07□□□□□ -1.28
SYNPO2-206ENST00000610556 MYL3P08590 195 aa7.07□□□□□ -1.28
SYNPO2-206ENST00000610556 ARL2P36404 184 aa7.07□□□□□ -1.28
SYNPO2-206ENST00000610556 RANBP1P43487 201 aa7.07□□□□□ -1.28
SYNPO2-206ENST00000610556 MGAT5Q09328 741 aa7.07□□□□□ -1.28
SYNPO2-206ENST00000610556 CCDC15Q0P6D6 951 aa7.07□□□□□ -1.28
SYNPO2-206ENST00000610556 PAN2Q504Q3 1202 aaKnown RBP7.07□□□□□ -1.28
SYNPO2-206ENST00000610556 ACSBG2Q5FVE4 666 aa7.07□□□□□ -1.28
SYNPO2-206ENST00000610556 LRRC8EQ6NSJ5 796 aa7.07□□□□□ -1.28
SYNPO2-206ENST00000610556 UNC5AQ6ZN44 842 aa7.07□□□□□ -1.28
SYNPO2-206ENST00000610556 CMC1Q7Z7K0 106 aa7.07□□□□□ -1.28
SYNPO2-206ENST00000610556 IFNEQ86WN2 208 aa7.07□□□□□ -1.28
SYNPO2-206ENST00000610556 MYLK4Q86YV6 388 aaPredicted RBP7.07□□□□□ -1.28
SYNPO2-206ENST00000610556 DEFB106AQ8N104 65 aa7.07□□□□□ -1.28
SYNPO2-206ENST00000610556 TMEM130Q8N3G9 435 aa7.07□□□□□ -1.28
SYNPO2-206ENST00000610556 PLD5Q8N7P1 536 aa7.07□□□□□ -1.28
SYNPO2-206ENST00000610556 BANPQ8N9N5 519 aa7.07□□□□□ -1.28
SYNPO2-206ENST00000610556 PIWIL2Q8TC59 973 aaKnown RBP7.07□□□□□ -1.28
SYNPO2-206ENST00000610556 SLC2A14Q8TDB8 520 aa7.07□□□□□ -1.28
SYNPO2-206ENST00000610556 RNF139Q8WU17 664 aa7.07□□□□□ -1.28
SYNPO2-206ENST00000610556 UCMAQ8WVF2 138 aa7.07□□□□□ -1.28
SYNPO2-206ENST00000610556 NDRG1Q92597 394 aaKnown RBP7.07□□□□□ -1.28
SYNPO2-206ENST00000610556 EME1Q96AY2 570 aa7.07□□□□□ -1.28
SYNPO2-206ENST00000610556 VPS39Q96JC1 886 aa7.07□□□□□ -1.28
SYNPO2-206ENST00000610556 EFHD1Q9BUP0 239 aa7.07□□□□□ -1.28
SYNPO2-206ENST00000610556 ILKAPQ9H0C8 392 aaPredicted RBP7.07□□□□□ -1.28
SYNPO2-206ENST00000610556 SETD4Q9NVD3 440 aa7.07□□□□□ -1.28
SYNPO2-206ENST00000610556 BTBD7Q9P203 1132 aa7.07□□□□□ -1.28
SYNPO2-206ENST00000610556 SLC17A6Q9P2U8 582 aa7.07□□□□□ -1.28
SYNPO2-206ENST00000610556 DCDC2Q9UHG0 476 aa7.07□□□□□ -1.28
SYNPO2-206ENST00000610556 AURKCQ9UQB9 309 aa7.07□□□□□ -1.28
SYNPO2-206ENST00000610556 DTNAQ9Y4J8 743 aa7.07□□□□□ -1.28
SYNPO2-206ENST00000610556 NFASCO94856 1347 aa7.07□□□□□ -1.28
SYNPO2-206ENST00000610556 GPR25O00155 361 aa7.07□□□□□ -1.28
SYNPO2-206ENST00000610556 PLSCR1O15162 318 aa7.07□□□□□ -1.28
SYNPO2-206ENST00000610556 DNAJC6O75061 913 aa7.07□□□□□ -1.28
SYNPO2-206ENST00000610556 SERPINE1P05121 402 aa7.07□□□□□ -1.28
SYNPO2-206ENST00000610556 TGFB3P10600 412 aa7.07□□□□□ -1.28
SYNPO2-206ENST00000610556 PSMB4P28070 264 aa7.07□□□□□ -1.28
SYNPO2-206ENST00000610556 ATXN1P54253 815 aaKnown RBP7.07□□□□□ -1.28
SYNPO2-206ENST00000610556 PKNOX1P55347 436 aa7.07□□□□□ -1.28
SYNPO2-206ENST00000610556 YWHAZP63104 245 aaKnown RBP7.07□□□□□ -1.28
SYNPO2-206ENST00000610556 SLC6A3Q01959 620 aa7.07□□□□□ -1.28
SYNPO2-206ENST00000610556 ADIGQ0VDE8 80 aa7.07□□□□□ -1.28
SYNPO2-206ENST00000610556 USP4Q13107 963 aa7.07□□□□□ -1.28
SYNPO2-206ENST00000610556 PEX6Q13608 980 aa7.07□□□□□ -1.28
SYNPO2-206ENST00000610556 NOMO1Q15155 1222 aa7.07□□□□□ -1.28
SYNPO2-206ENST00000610556 OASLQ15646 514 aaKnown RBP7.07□□□□□ -1.28
SYNPO2-206ENST00000610556 PPP1R26Q5T8A7 1209 aaPredicted RBP7.07□□□□□ -1.28
SYNPO2-206ENST00000610556 ITPRIPL1Q6GPH6 555 aa7.07□□□□□ -1.28
SYNPO2-206ENST00000610556 IRGCQ6NXR0 463 aa7.07□□□□□ -1.28
SYNPO2-206ENST00000610556 TDRPQ86YL5 185 aa7.07□□□□□ -1.28
SYNPO2-206ENST00000610556 ULK2Q8IYT8 1036 aa7.07□□□□□ -1.28
SYNPO2-206ENST00000610556 OR6J1Q8NGC5 347 aa7.07□□□□□ -1.28
SYNPO2-206ENST00000610556 ZNF398Q8TD17 642 aa7.07□□□□□ -1.28
SYNPO2-206ENST00000610556 ELMO2Q96JJ3 720 aa7.07□□□□□ -1.28
SYNPO2-206ENST00000610556 L3MBTL3Q96JM7 780 aaPredicted RBP7.07□□□□□ -1.28
SYNPO2-206ENST00000610556 ZNF560Q96MR9 790 aa7.07□□□□□ -1.28
SYNPO2-206ENST00000610556 OLFM3Q96PB7 478 aa7.07□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms