RNA–Protein interactions for RNA: ENST00000610538.4

TP53-219, Transcript of tumor protein p53, humanhuman

TSL 1 (best) BASIC

Gene TP53, Length 2,580 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TP53-219ENST00000610538 PCDHB5Q9Y5E4 795 aa12.78□□□□□ -0.36
TP53-219ENST00000610538 USP3Q9Y6I4 520 aa12.78□□□□□ -0.36
TP53-219ENST00000610538 A0A1W2PQH9 124 aa12.78□□□□□ -0.36
TP53-219ENST00000610538 ZBBXA8MT70 800 aa12.78□□□□□ -0.36
TP53-219ENST00000610538 MCF2LO15068 1137 aa12.78□□□□□ -0.36
TP53-219ENST00000610538 PARNO95453 639 aaKnown RBP12.78□□□□□ -0.36
TP53-219ENST00000610538 TBX18O95935 607 aa12.78□□□□□ -0.36
TP53-219ENST00000610538 PAX3P23760 479 aa12.78□□□□□ -0.36
TP53-219ENST00000610538 OR1D2P34982 312 aa12.78□□□□□ -0.36
TP53-219ENST00000610538 HSPA9P38646 679 aaKnown RBP12.78□□□□□ -0.36
TP53-219ENST00000610538 YWHAGP61981 247 aaKnown RBP eCLIP12.78□□□□□ -0.36
TP53-219ENST00000610538 TFDP2Q14188 446 aa12.78□□□□□ -0.36
TP53-219ENST00000610538 NFE2Q16621 373 aaPredicted RBP12.78□□□□□ -0.36
TP53-219ENST00000610538 IZUMO3Q5VZ72 239 aa12.78□□□□□ -0.36
TP53-219ENST00000610538 BTBD8Q5XKL5 378 aa12.78□□□□□ -0.36
TP53-219ENST00000610538 KCTD16Q68DU8 428 aa12.78□□□□□ -0.36
TP53-219ENST00000610538 SCD5Q86SK9 330 aa12.78□□□□□ -0.36
TP53-219ENST00000610538 TAC4Q86UU9 113 aa12.78□□□□□ -0.36
TP53-219ENST00000610538 NKD2Q969F2 451 aaPredicted RBP12.78□□□□□ -0.36
TP53-219ENST00000610538 RUFY1Q96T51 708 aa12.78□□□□□ -0.36
TP53-219ENST00000610538 TKTL2Q9H0I9 626 aa12.78□□□□□ -0.36
TP53-219ENST00000610538 ADAM7Q9H2U9 754 aa12.78□□□□□ -0.36
TP53-219ENST00000610538 MAGED2Q9UNF1 606 aaPredicted RBP12.78□□□□□ -0.36
TP53-219ENST00000610538 ITGAVP06756 1048 aa12.77□□□□□ -0.36
TP53-219ENST00000610538 ADRA1BP35368 520 aa12.77□□□□□ -0.36
TP53-219ENST00000610538 NNTQ13423 1086 aa12.77□□□□□ -0.36
TP53-219ENST00000610538 BTG3Q14201 252 aaPredicted RBP12.77□□□□□ -0.36
TP53-219ENST00000610538 KCNT2Q6UVM3 1135 aa12.77□□□□□ -0.36
TP53-219ENST00000610538 TTC13Q8NBP0 860 aa12.77□□□□□ -0.36
TP53-219ENST00000610538 FBXO22Q8NEZ5 403 aa12.77□□□□□ -0.36
TP53-219ENST00000610538 ARL8AQ96BM9 186 aa12.77□□□□□ -0.36
TP53-219ENST00000610538 VPS18Q9P253 973 aa12.77□□□□□ -0.36
TP53-219ENST00000610538 MTRF1LQ9UGC7 380 aaKnown RBP12.77□□□□□ -0.36
TP53-219ENST00000610538 F5H423 210 aaPredicted RBP12.77□□□□□ -0.37
TP53-219ENST00000610538 SRGAP2BP0DMP2 458 aa12.77□□□□□ -0.37
TP53-219ENST00000610538 ITIH2P19823 946 aa12.77□□□□□ -0.37
TP53-219ENST00000610538 RBL1P28749 1068 aa12.77□□□□□ -0.37
TP53-219ENST00000610538 ARL4AP40617 200 aa12.77□□□□□ -0.37
TP53-219ENST00000610538 PMS2P54278 862 aa12.77□□□□□ -0.37
TP53-219ENST00000610538 HNRNPH2P55795 449 aaKnown RBP12.77□□□□□ -0.37
TP53-219ENST00000610538 LMNB2Q03252 620 aa12.77□□□□□ -0.37
TP53-219ENST00000610538 GAD2Q05329 585 aa12.77□□□□□ -0.37
TP53-219ENST00000610538 DRICH1Q6PGQ1 229 aaPredicted RBP12.77□□□□□ -0.37
TP53-219ENST00000610538 NUP93Q8N1F7 819 aa12.77□□□□□ -0.37
TP53-219ENST00000610538 EIF1ADQ8N9N8 165 aaKnown RBP12.77□□□□□ -0.37
TP53-219ENST00000610538 DQX1Q8TE96 717 aaKnown RBP12.77□□□□□ -0.37
TP53-219ENST00000610538 RNF139Q8WU17 664 aa12.77□□□□□ -0.37
TP53-219ENST00000610538 LRRC45Q96CN5 670 aa12.77□□□□□ -0.37
TP53-219ENST00000610538 IGSF21Q96ID5 467 aa12.77□□□□□ -0.37
TP53-219ENST00000610538 ZNF670Q9BS34 389 aa12.77□□□□□ -0.37
TP53-219ENST00000610538 ACBD3Q9H3P7 528 aa12.77□□□□□ -0.37
TP53-219ENST00000610538 AAASQ9NRG9 546 aa12.77□□□□□ -0.37
TP53-219ENST00000610538 DRG1Q9Y295 367 aaKnown RBP12.77□□□□□ -0.37
TP53-219ENST00000610538 REV3LO60673 3130 aa12.77□□□□□ -0.37
TP53-219ENST00000610538 MICAL3Q7RTP6 2002 aa12.77□□□□□ -0.37
TP53-219ENST00000610538 FNDC1Q4ZHG4 1894 aaPredicted RBP12.77□□□□□ -0.37
TP53-219ENST00000610538 MTMR11A4FU01 709 aa12.76□□□□□ -0.37
TP53-219ENST00000610538 KCNN4O15554 427 aa12.76□□□□□ -0.37
TP53-219ENST00000610538 VNN2O95498 520 aa12.76□□□□□ -0.37
TP53-219ENST00000610538 MOCS2O96007 188 aaPredicted RBP12.76□□□□□ -0.37
TP53-219ENST00000610538 SHBGP04278 402 aa12.76□□□□□ -0.37
TP53-219ENST00000610538 WDR5P61964 334 aaKnown RBP12.76□□□□□ -0.37
TP53-219ENST00000610538 SLC29A2Q14542 456 aa12.76□□□□□ -0.37
TP53-219ENST00000610538 NOMO1Q15155 1222 aa12.76□□□□□ -0.37
TP53-219ENST00000610538 EFHC2Q5JST6 749 aa12.76□□□□□ -0.37
TP53-219ENST00000610538 CEP85LQ5SZL2 805 aa12.76□□□□□ -0.37
TP53-219ENST00000610538 CASP10Q92851 521 aa12.76□□□□□ -0.37
TP53-219ENST00000610538 LGMNQ99538 433 aa12.76□□□□□ -0.37
TP53-219ENST00000610538 WHRNQ9P202 907 aa12.76□□□□□ -0.37
TP53-219ENST00000610538 FBXW11Q9UKB1 542 aa12.76□□□□□ -0.37
TP53-219ENST00000610538 ZNF638Q14966 1978 aaKnown RBP12.76□□□□□ -0.37
TP53-219ENST00000610538 NUP205Q92621 2012 aa12.76□□□□□ -0.37
TP53-219ENST00000610538 MYO18AQ92614 2054 aaKnown RBP12.76□□□□□ -0.37
TP53-219ENST00000610538 SMIM23A6NLE4 172 aa12.76□□□□□ -0.37
TP53-219ENST00000610538 RNF40O75150 1001 aa12.76□□□□□ -0.37
TP53-219ENST00000610538 ACSL3O95573 720 aa12.76□□□□□ -0.37
TP53-219ENST00000610538 CA8P35219 290 aa12.76□□□□□ -0.37
TP53-219ENST00000610538 RPL22P35268 128 aaKnown RBP12.76□□□□□ -0.37
TP53-219ENST00000610538 ROR1Q01973 937 aa12.76□□□□□ -0.37
TP53-219ENST00000610538 GPR17Q13304 367 aa12.76□□□□□ -0.37
TP53-219ENST00000610538 DNAJC21Q5F1R6 531 aaKnown RBP12.76□□□□□ -0.37
TP53-219ENST00000610538 FAXCQ5TGI0 409 aa12.76□□□□□ -0.37
TP53-219ENST00000610538 SLC9A4Q6AI14 798 aa12.76□□□□□ -0.37
TP53-219ENST00000610538 SYDE1Q6ZW31 735 aaPredicted RBP12.76□□□□□ -0.37
TP53-219ENST00000610538 ANKS3Q6ZW76 656 aa12.76□□□□□ -0.37
TP53-219ENST00000610538 BNIPLQ7Z465 357 aa12.76□□□□□ -0.37
TP53-219ENST00000610538 GOLGA6L1Q8N7Z2 621 aa12.76□□□□□ -0.37
TP53-219ENST00000610538 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP12.76□□□□□ -0.37
TP53-219ENST00000610538 YME1L1Q96TA2 773 aa12.76□□□□□ -0.37
TP53-219ENST00000610538 NCAPGQ9BPX3 1015 aa12.76□□□□□ -0.37
TP53-219ENST00000610538 CEP41Q9BYV8 373 aa12.76□□□□□ -0.37
TP53-219ENST00000610538 ARHGEF4Q9NR80 690 aa12.76□□□□□ -0.37
TP53-219ENST00000610538 GMIPQ9P107 970 aa12.76□□□□□ -0.37
TP53-219ENST00000610538 OR12D3Q9UGF7 316 aa12.76□□□□□ -0.37
TP53-219ENST00000610538 XPO7Q9UIA9 1087 aaKnown RBP12.76□□□□□ -0.37
TP53-219ENST00000610538 ABHD14A-ACY1A0A1B0GW23 586 aa12.76□□□□□ -0.37
TP53-219ENST00000610538 WDR27A2RRH5 827 aa12.76□□□□□ -0.37
TP53-219ENST00000610538 OR6C75A6NL08 312 aa12.76□□□□□ -0.37
TP53-219ENST00000610538 PPFIA2O75334 1257 aa12.76□□□□□ -0.37
TP53-219ENST00000610538 BANF1O75531 89 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms