RNA–Protein interactions for RNA: ENST00000610462.1

CSPG5-205, Transcript of chondroitin sulfate proteoglycan 5, humanhuman

TSL 5 BASIC

Gene CSPG5, Length 2,073 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5-205ENST00000610462 CCT8L1PA6NM43 557 aa29.03■■■□□ 2.24
CSPG5-205ENST00000610462 TYROBPO43914 113 aa29.03■■■□□ 2.24
CSPG5-205ENST00000610462 METTL18O95568 372 aa29.03■■■□□ 2.24
CSPG5-205ENST00000610462 DSC3Q14574 896 aa29.03■■■□□ 2.24
CSPG5-205ENST00000610462 TIGD5Q53EQ6 642 aa29.03■■■□□ 2.24
CSPG5-205ENST00000610462 LACTB2Q53H82 288 aaPredicted RBP29.03■■■□□ 2.24
CSPG5-205ENST00000610462 RAB41Q5JT25 222 aa29.03■■■□□ 2.24
CSPG5-205ENST00000610462 ZMIZ2Q8NF64 920 aa29.03■■■□□ 2.24
CSPG5-205ENST00000610462 RNF139Q8WU17 664 aa29.03■■■□□ 2.24
CSPG5-205ENST00000610462 MZB1Q8WU39 189 aa29.03■■■□□ 2.24
CSPG5-205ENST00000610462 TFB1MQ8WVM0 346 aaKnown RBP29.03■■■□□ 2.24
CSPG5-205ENST00000610462 CNGB3Q9NQW8 809 aa29.03■■■□□ 2.24
CSPG5-205ENST00000610462 SYNJ2BP-COX16A0A087WUM0 186 aa29.02■■■□□ 2.24
CSPG5-205ENST00000610462 FYNP06241 537 aa29.02■■■□□ 2.24
CSPG5-205ENST00000610462 GHRP10912 638 aa29.02■■■□□ 2.24
CSPG5-205ENST00000610462 TPSB2P20231 275 aa29.02■■■□□ 2.24
CSPG5-205ENST00000610462 PCSK1P29120 753 aa29.02■■■□□ 2.24
CSPG5-205ENST00000610462 SPARCL1Q14515 664 aa29.02■■■□□ 2.24
CSPG5-205ENST00000610462 TPSAB1Q15661 275 aa29.02■■■□□ 2.24
CSPG5-205ENST00000610462 ACTR5Q9H9F9 607 aaPredicted RBP29.02■■■□□ 2.24
CSPG5-205ENST00000610462 COX16Q9P0S2 106 aa29.02■■■□□ 2.24
CSPG5-205ENST00000610462 PIAS1O75925 651 aa29.01■■■□□ 2.24
CSPG5-205ENST00000610462 TAC1P20366 129 aa29.01■■■□□ 2.24
CSPG5-205ENST00000610462 CCND3P30281 292 aaPredicted RBP29.01■■■□□ 2.24
CSPG5-205ENST00000610462 RABGGTBP53611 331 aa29.01■■■□□ 2.24
CSPG5-205ENST00000610462 NME3Q13232 169 aa29.01■■■□□ 2.24
CSPG5-205ENST00000610462 CCDC33Q8N5R6 958 aa29.01■■■□□ 2.24
CSPG5-205ENST00000610462 KCNK16Q96T55 309 aa29.01■■■□□ 2.24
CSPG5-205ENST00000610462 SLC9A7Q96T83 725 aa29.01■■■□□ 2.24
CSPG5-205ENST00000610462 PIGVQ9NUD9 493 aa29.01■■■□□ 2.24
CSPG5-205ENST00000610462 ABT1Q9ULW3 272 aaKnown RBP29.01■■■□□ 2.24
CSPG5-205ENST00000610462 USP15Q9Y4E8 981 aaPredicted RBP29.01■■■□□ 2.24
CSPG5-205ENST00000610462 C9IYK1 514 aa29.01■■■□□ 2.23
CSPG5-205ENST00000610462 MYCNP04198 464 aaPredicted RBP29.01■■■□□ 2.23
CSPG5-205ENST00000610462 CA4P22748 312 aa29.01■■■□□ 2.23
CSPG5-205ENST00000610462 FOXN2P32314 431 aa29.01■■■□□ 2.23
CSPG5-205ENST00000610462 RPA3P35244 121 aaPredicted RBP29.01■■■□□ 2.23
CSPG5-205ENST00000610462 ACTN3Q08043 901 aaPredicted RBP29.01■■■□□ 2.23
CSPG5-205ENST00000610462 SF3A3Q12874 501 aaKnown RBP eCLIP29.01■■■□□ 2.23
CSPG5-205ENST00000610462 CCSAPQ6IQ19 270 aaPredicted RBP29.01■■■□□ 2.23
CSPG5-205ENST00000610462 HTR3CQ8WXA8 447 aa29.01■■■□□ 2.23
CSPG5-205ENST00000610462 LRRC39Q96DD0 335 aa29.01■■■□□ 2.23
CSPG5-205ENST00000610462 PAIP2Q9BPZ3 127 aaKnown RBP29.01■■■□□ 2.23
CSPG5-205ENST00000610462 TMPRSS4Q9NRS4 437 aa29.01■■■□□ 2.23
CSPG5-205ENST00000610462 CAPN9O14815 690 aa29■■■□□ 2.23
CSPG5-205ENST00000610462 ODC1P11926 461 aa29■■■□□ 2.23
CSPG5-205ENST00000610462 KRT4P19013 534 aa29■■■□□ 2.23
CSPG5-205ENST00000610462 CACNA2D1P54289 1103 aa29■■■□□ 2.23
CSPG5-205ENST00000610462 GPRIN1Q7Z2K8 1008 aa29■■■□□ 2.23
CSPG5-205ENST00000610462 RNF169Q8NCN4 708 aa29■■■□□ 2.23
CSPG5-205ENST00000610462 SMARCD1Q96GM5 515 aa29■■■□□ 2.23
CSPG5-205ENST00000610462 TMEM30AQ9NV96 361 aa29■■■□□ 2.23
CSPG5-205ENST00000610462 SF3B1O75533 1304 aaKnown RBP eCLIP29■■■□□ 2.23
CSPG5-205ENST00000610462 A0A0U1RQF3 1178 aa29■■■□□ 2.23
CSPG5-205ENST00000610462 YJEFN3A6XGL0 299 aa29■■■□□ 2.23
CSPG5-205ENST00000610462 E7ENQ6 273 aa29■■■□□ 2.23
CSPG5-205ENST00000610462 MFSD11O43934 449 aa29■■■□□ 2.23
CSPG5-205ENST00000610462 VAV1P15498 845 aa29■■■□□ 2.23
CSPG5-205ENST00000610462 CST5P28325 142 aaPredicted RBP29■■■□□ 2.23
CSPG5-205ENST00000610462 GBP2P32456 591 aaPredicted RBP29■■■□□ 2.23
CSPG5-205ENST00000610462 AIF1P55008 147 aa29■■■□□ 2.23
CSPG5-205ENST00000610462 LPIN1Q14693 890 aa29■■■□□ 2.23
CSPG5-205ENST00000610462 KBTBD12Q3ZCT8 623 aa29■■■□□ 2.23
CSPG5-205ENST00000610462 SLC7A14Q8TBB6 771 aa29■■■□□ 2.23
CSPG5-205ENST00000610462 SLC44A1Q8WWI5 657 aa29■■■□□ 2.23
CSPG5-205ENST00000610462 CFAP36Q96G28 342 aa29■■■□□ 2.23
CSPG5-205ENST00000610462 CAPN7Q9Y6W3 813 aa29■■■□□ 2.23
CSPG5-205ENST00000610462 HHLA1C9JL84 531 aa28.99■■■□□ 2.23
CSPG5-205ENST00000610462 TTC31Q49AM3 519 aaPredicted RBP28.99■■■□□ 2.23
CSPG5-205ENST00000610462 RTP3Q9BQQ7 232 aa28.99■■■□□ 2.23
CSPG5-205ENST00000610462 POMCP01189 267 aa28.98■■■□□ 2.23
CSPG5-205ENST00000610462 MAGEA3P43357 314 aa28.98■■■□□ 2.23
CSPG5-205ENST00000610462 SEMA5AQ13591 1074 aa28.98■■■□□ 2.23
CSPG5-205ENST00000610462 ZKSCAN8Q15776 578 aaPredicted RBP28.98■■■□□ 2.23
CSPG5-205ENST00000610462 NTAN1Q96AB6 310 aa28.98■■■□□ 2.23
CSPG5-205ENST00000610462 PGBD4Q96DM1 585 aa28.98■■■□□ 2.23
CSPG5-205ENST00000610462 ZC3H7BQ9UGR2 993 aaKnown RBP28.98■■■□□ 2.23
CSPG5-205ENST00000610462 TTLL3Q9Y4R7 772 aa28.98■■■□□ 2.23
CSPG5-205ENST00000610462 IKBKGQ9Y6K9 419 aa28.98■■■□□ 2.23
CSPG5-205ENST00000610462 IQANK1A0A1B0GTG1 560 aa28.98■■■□□ 2.23
CSPG5-205ENST00000610462 ZWINTO95229 277 aa28.98■■■□□ 2.23
CSPG5-205ENST00000610462 ALDH1A1P00352 501 aa28.98■■■□□ 2.23
CSPG5-205ENST00000610462 SLC1A5Q15758 541 aa28.98■■■□□ 2.23
CSPG5-205ENST00000610462 SPRED3Q2MJR0 410 aa28.98■■■□□ 2.23
CSPG5-205ENST00000610462 SPATA21Q7Z572 469 aa28.98■■■□□ 2.23
CSPG5-205ENST00000610462 METTL23Q86XA0 190 aa28.98■■■□□ 2.23
CSPG5-205ENST00000610462 CSNK1G1Q9HCP0 422 aa28.98■■■□□ 2.23
CSPG5-205ENST00000610462 A0A0A0MRY4 1105 aa28.97■■■□□ 2.23
CSPG5-205ENST00000610462 I3L4J1 428 aa28.97■■■□□ 2.23
CSPG5-205ENST00000610462 DNM1LO00429 736 aa28.97■■■□□ 2.23
CSPG5-205ENST00000610462 CREB3O43889 395 aa28.97■■■□□ 2.23
CSPG5-205ENST00000610462 SUN1O94901 812 aa28.97■■■□□ 2.23
CSPG5-205ENST00000610462 CYP11A1P05108 521 aa28.97■■■□□ 2.23
CSPG5-205ENST00000610462 GSTA2P09210 222 aa28.97■■■□□ 2.23
CSPG5-205ENST00000610462 USP17L7P0C7H9 530 aa28.97■■■□□ 2.23
CSPG5-205ENST00000610462 ADRA1BP35368 520 aa28.97■■■□□ 2.23
CSPG5-205ENST00000610462 GRIK3Q13003 919 aa28.97■■■□□ 2.23
CSPG5-205ENST00000610462 PTK7Q13308 1070 aa28.97■■■□□ 2.23
CSPG5-205ENST00000610462 DPYSQ14117 519 aa28.97■■■□□ 2.23
CSPG5-205ENST00000610462 PAFAH1B3Q15102 231 aaKnown RBP28.97■■■□□ 2.23
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms