RNA–Protein interactions for RNA: ENST00000609477.5

HDDC2-209, Transcript of HD domain containing 2, humanhuman

TSL 4

Gene HDDC2, Length 564 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC2-209ENST00000609477 TAF3Q5VWG9 929 aa14.88□□□□□ -0.03
HDDC2-209ENST00000609477 OR6B2Q6IFH4 312 aa14.88□□□□□ -0.03
HDDC2-209ENST00000609477 DENND1CQ8IV53 801 aa14.88□□□□□ -0.03
HDDC2-209ENST00000609477 DQX1Q8TE96 717 aaKnown RBP14.88□□□□□ -0.03
HDDC2-209ENST00000609477 SLC2A13Q96QE2 648 aa14.88□□□□□ -0.03
HDDC2-209ENST00000609477 DDX50Q9BQ39 737 aaKnown RBP14.88□□□□□ -0.03
HDDC2-209ENST00000609477 BBS2Q9BXC9 721 aa14.88□□□□□ -0.03
HDDC2-209ENST00000609477 NUCKS1Q9H1E3 243 aaKnown RBP14.88□□□□□ -0.03
HDDC2-209ENST00000609477 FBRSL1Q9HCM7 1045 aaKnown RBP14.88□□□□□ -0.03
HDDC2-209ENST00000609477 PRMT8Q9NR22 394 aaPredicted RBP14.88□□□□□ -0.03
HDDC2-209ENST00000609477 NAALADL1Q9UQQ1 740 aa14.88□□□□□ -0.03
HDDC2-209ENST00000609477 H0Y858 1186 aa14.87□□□□□ -0.03
HDDC2-209ENST00000609477 SCAMP3O14828 347 aaKnown RBP14.87□□□□□ -0.03
HDDC2-209ENST00000609477 KAT7O95251 611 aa14.87□□□□□ -0.03
HDDC2-209ENST00000609477 EGFP01133 1207 aa14.87□□□□□ -0.03
HDDC2-209ENST00000609477 PENKP01210 267 aaPredicted RBP14.87□□□□□ -0.03
HDDC2-209ENST00000609477 IGLV3-25P01717 112 aa14.87□□□□□ -0.03
HDDC2-209ENST00000609477 ERBB2P04626 1255 aa14.87□□□□□ -0.03
HDDC2-209ENST00000609477 HMBSP08397 361 aa14.87□□□□□ -0.03
HDDC2-209ENST00000609477 TYRP14679 529 aa14.87□□□□□ -0.03
HDDC2-209ENST00000609477 HOXA6P31267 233 aa14.87□□□□□ -0.03
HDDC2-209ENST00000609477 NOS2P35228 1153 aa14.87□□□□□ -0.03
HDDC2-209ENST00000609477 MRPS21P82921 87 aaKnown RBP14.87□□□□□ -0.03
HDDC2-209ENST00000609477 CDK17Q00537 523 aa14.87□□□□□ -0.03
HDDC2-209ENST00000609477 FMO1Q01740 532 aa14.87□□□□□ -0.03
HDDC2-209ENST00000609477 NHLH1Q02575 133 aa14.87□□□□□ -0.03
HDDC2-209ENST00000609477 EIF4EBP2Q13542 120 aaPredicted RBP14.87□□□□□ -0.03
HDDC2-209ENST00000609477 MPPE1Q53F39 396 aa14.87□□□□□ -0.03
HDDC2-209ENST00000609477 DCAF6Q58WW2 860 aa14.87□□□□□ -0.03
HDDC2-209ENST00000609477 MPP7Q5T2T1 576 aa14.87□□□□□ -0.03
HDDC2-209ENST00000609477 SYPL2Q5VXT5 272 aa14.87□□□□□ -0.03
HDDC2-209ENST00000609477 ZC3H14Q6PJT7 736 aaKnown RBP14.87□□□□□ -0.03
HDDC2-209ENST00000609477 FAM183BPQ6ZVS7 135 aa14.87□□□□□ -0.03
HDDC2-209ENST00000609477 ZNF557Q8N988 423 aaPredicted RBP14.87□□□□□ -0.03
HDDC2-209ENST00000609477 BAP1Q92560 729 aa14.87□□□□□ -0.03
HDDC2-209ENST00000609477 ACDQ96AP0 544 aa14.87□□□□□ -0.03
HDDC2-209ENST00000609477 SLC39A13Q96H72 371 aa14.87□□□□□ -0.03
HDDC2-209ENST00000609477 SLC2A11Q9BYW1 496 aa14.87□□□□□ -0.03
HDDC2-209ENST00000609477 SEMA4AQ9H3S1 761 aa14.87□□□□□ -0.03
HDDC2-209ENST00000609477 ARHGEF4Q9NR80 690 aa14.87□□□□□ -0.03
HDDC2-209ENST00000609477 SLTMQ9NWH9 1034 aaKnown RBP eCLIP14.87□□□□□ -0.03
HDDC2-209ENST00000609477 AIPL1Q9NZN9 384 aa14.87□□□□□ -0.03
HDDC2-209ENST00000609477 FBXO10Q9UK96 956 aa14.87□□□□□ -0.03
HDDC2-209ENST00000609477 MUC6Q6W4X9 2439 aa14.87□□□□□ -0.03
HDDC2-209ENST00000609477 KIAA1549LQ6ZVL6 1849 aa14.87□□□□□ -0.03
HDDC2-209ENST00000609477 A0A1W2PQJ5 194 aa14.86□□□□□ -0.03
HDDC2-209ENST00000609477 NEDD8-MDP1E9PL57 170 aa14.86□□□□□ -0.03
HDDC2-209ENST00000609477 MSI1O43347 362 aaKnown RBP14.86□□□□□ -0.03
HDDC2-209ENST00000609477 TULP3O75386 442 aa14.86□□□□□ -0.03
HDDC2-209ENST00000609477 TRUB2O95900 331 aaKnown RBP14.86□□□□□ -0.03
HDDC2-209ENST00000609477 UNGP13051 313 aaPredicted RBP14.86□□□□□ -0.03
HDDC2-209ENST00000609477 CHRNB2P17787 502 aa14.86□□□□□ -0.03
HDDC2-209ENST00000609477 MMP8P22894 467 aa14.86□□□□□ -0.03
HDDC2-209ENST00000609477 MATKP42679 507 aa14.86□□□□□ -0.03
HDDC2-209ENST00000609477 GSCP56915 257 aaPredicted RBP14.86□□□□□ -0.03
HDDC2-209ENST00000609477 CENPCQ03188 943 aa14.86□□□□□ -0.03
HDDC2-209ENST00000609477 GAS6Q14393 721 aa14.86□□□□□ -0.03
HDDC2-209ENST00000609477 ACBD5Q5T8D3 534 aaPredicted RBP14.86□□□□□ -0.03
HDDC2-209ENST00000609477 TPGS1Q6ZTW0 290 aa14.86□□□□□ -0.03
HDDC2-209ENST00000609477 IRF2BP2Q7Z5L9 587 aa14.86□□□□□ -0.03
HDDC2-209ENST00000609477 MAML2Q8IZL2 1156 aaPredicted RBP14.86□□□□□ -0.03
HDDC2-209ENST00000609477 DEFB106AQ8N104 65 aa14.86□□□□□ -0.03
HDDC2-209ENST00000609477 PHTF2Q8N3S3 785 aa14.86□□□□□ -0.03
HDDC2-209ENST00000609477 SLC20A1Q8WUM9 679 aa14.86□□□□□ -0.03
HDDC2-209ENST00000609477 NELL1Q92832 810 aa14.86□□□□□ -0.03
HDDC2-209ENST00000609477 ATOH1Q92858 354 aaPredicted RBP14.86□□□□□ -0.03
HDDC2-209ENST00000609477 AGPAT1Q99943 283 aa14.86□□□□□ -0.03
HDDC2-209ENST00000609477 TTYH3Q9C0H2 523 aa14.86□□□□□ -0.03
HDDC2-209ENST00000609477 RBM12Q9NTZ6 932 aaKnown RBP14.86□□□□□ -0.03
HDDC2-209ENST00000609477 TJP2Q9UDY2 1190 aa14.86□□□□□ -0.03
HDDC2-209ENST00000609477 RAPGEFL1Q9UHV5 662 aa14.86□□□□□ -0.03
HDDC2-209ENST00000609477 SLC12A6Q9UHW9 1150 aa14.86□□□□□ -0.03
HDDC2-209ENST00000609477 STAP1Q9ULZ2 295 aa14.86□□□□□ -0.03
HDDC2-209ENST00000609477 SLC27A6Q9Y2P4 619 aa14.86□□□□□ -0.03
HDDC2-209ENST00000609477 STARD13Q9Y3M8 1113 aa14.86□□□□□ -0.03
HDDC2-209ENST00000609477 PAXBP1Q9Y5B6 917 aa14.86□□□□□ -0.03
HDDC2-209ENST00000609477 MYOFQ9NZM1 2061 aa14.86□□□□□ -0.03
HDDC2-209ENST00000609477 K7EQS6 105 aa14.85□□□□□ -0.03
HDDC2-209ENST00000609477 GFRA2O00451 464 aa14.85□□□□□ -0.03
HDDC2-209ENST00000609477 CBFA2T2O43439 604 aa14.85□□□□□ -0.03
HDDC2-209ENST00000609477 ACSL4O60488 711 aa14.85□□□□□ -0.03
HDDC2-209ENST00000609477 RNF40O75150 1001 aa14.85□□□□□ -0.03
HDDC2-209ENST00000609477 DAB1O75553 588 aa14.85□□□□□ -0.03
HDDC2-209ENST00000609477 F9P00740 461 aa14.85□□□□□ -0.03
HDDC2-209ENST00000609477 APOEP02649 317 aa14.85□□□□□ -0.03
HDDC2-209ENST00000609477 SP9P0CG40 484 aa14.85□□□□□ -0.03
HDDC2-209ENST00000609477 PLA2G5P39877 138 aa14.85□□□□□ -0.03
HDDC2-209ENST00000609477 PBX1P40424 430 aa14.85□□□□□ -0.03
HDDC2-209ENST00000609477 NBL1P41271 181 aa14.85□□□□□ -0.03
HDDC2-209ENST00000609477 PRKCIP41743 596 aa14.85□□□□□ -0.03
HDDC2-209ENST00000609477 NSFP46459 744 aaKnown RBP14.85□□□□□ -0.03
HDDC2-209ENST00000609477 SLC6A11P48066 632 aa14.85□□□□□ -0.03
HDDC2-209ENST00000609477 ARID5AQ03989 594 aa14.85□□□□□ -0.03
HDDC2-209ENST00000609477 TAF5Q15542 800 aa14.85□□□□□ -0.03
HDDC2-209ENST00000609477 FYB2Q5VWT5 728 aa14.85□□□□□ -0.03
HDDC2-209ENST00000609477 NAA35Q5VZE5 725 aa14.85□□□□□ -0.03
HDDC2-209ENST00000609477 GRAMD4Q6IC98 578 aa14.85□□□□□ -0.03
HDDC2-209ENST00000609477 SYT13Q7L8C5 426 aa14.85□□□□□ -0.03
HDDC2-209ENST00000609477 TRMT11Q7Z4G4 463 aaKnown RBP14.85□□□□□ -0.03
HDDC2-209ENST00000609477 TAC4Q86UU9 113 aa14.85□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms