RNA–Protein interactions for RNA: ENST00000609445.5

SGMS1-209, Transcript of sphingomyelin synthase 1, humanhuman

TSL 4

Gene SGMS1, Length 594 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-209ENST00000609445 VDRP11473 427 aa16.75■□□□□ 0.27
SGMS1-209ENST00000609445 CHKAP35790 457 aa16.75■□□□□ 0.27
SGMS1-209ENST00000609445 FMO5P49326 533 aa16.75■□□□□ 0.27
SGMS1-209ENST00000609445 YWHAEP62258 255 aaKnown RBP16.75■□□□□ 0.27
SGMS1-209ENST00000609445 KLHL10Q6JEL2 608 aa16.75■□□□□ 0.27
SGMS1-209ENST00000609445 KIAA1324Q6UXG2 1013 aaKnown RBP16.75■□□□□ 0.27
SGMS1-209ENST00000609445 TFAP2BQ92481 460 aa16.75■□□□□ 0.27
SGMS1-209ENST00000609445 EDEM1Q92611 657 aa16.75■□□□□ 0.27
SGMS1-209ENST00000609445 PIWIL1Q96J94 861 aaKnown RBP16.75■□□□□ 0.27
SGMS1-209ENST00000609445 NUSAP1Q9BXS6 441 aaKnown RBP16.75■□□□□ 0.27
SGMS1-209ENST00000609445 SFMBT1Q9UHJ3 866 aa16.75■□□□□ 0.27
SGMS1-209ENST00000609445 PILRBQ9UKJ0 227 aa16.75■□□□□ 0.27
SGMS1-209ENST00000609445 ANGPTL2Q9UKU9 493 aa16.75■□□□□ 0.27
SGMS1-209ENST00000609445 SLC27A6Q9Y2P4 619 aa16.75■□□□□ 0.27
SGMS1-209ENST00000609445 CKAP5Q14008 2032 aa16.74■□□□□ 0.27
SGMS1-209ENST00000609445 PCNX2A6NKB5 2137 aa16.74■□□□□ 0.27
SGMS1-209ENST00000609445 RNF225M0QZC1 329 aaPredicted RBP16.74■□□□□ 0.27
SGMS1-209ENST00000609445 GFRA2O00451 464 aa16.74■□□□□ 0.27
SGMS1-209ENST00000609445 ZBTB24O43167 697 aaPredicted RBP16.74■□□□□ 0.27
SGMS1-209ENST00000609445 TSPAN3O60637 253 aa16.74■□□□□ 0.27
SGMS1-209ENST00000609445 GABBR2O75899 941 aa16.74■□□□□ 0.27
SGMS1-209ENST00000609445 CFIP05156 583 aa16.74■□□□□ 0.27
SGMS1-209ENST00000609445 ENGP17813 658 aa16.74■□□□□ 0.27
SGMS1-209ENST00000609445 BMP6P22004 513 aa16.74■□□□□ 0.27
SGMS1-209ENST00000609445 TBXAS1P24557 533 aaPredicted RBP16.74■□□□□ 0.27
SGMS1-209ENST00000609445 IL12RB1P42701 662 aa16.74■□□□□ 0.27
SGMS1-209ENST00000609445 MAPK8P45983 427 aa16.74■□□□□ 0.27
SGMS1-209ENST00000609445 RGS7P49802 495 aa16.74■□□□□ 0.27
SGMS1-209ENST00000609445 STIM1Q13586 685 aa16.74■□□□□ 0.27
SGMS1-209ENST00000609445 TRIP4Q15650 581 aaPredicted RBP16.74■□□□□ 0.27
SGMS1-209ENST00000609445 CCDC40Q4G0X9 1142 aa16.74■□□□□ 0.27
SGMS1-209ENST00000609445 PKDCCQ504Y2 493 aa16.74■□□□□ 0.27
SGMS1-209ENST00000609445 SPDYCQ5MJ68 293 aa16.74■□□□□ 0.27
SGMS1-209ENST00000609445 SH3PXD2AQ5TCZ1 1133 aa16.74■□□□□ 0.27
SGMS1-209ENST00000609445 PEAR1Q5VY43 1037 aaPredicted RBP16.74■□□□□ 0.27
SGMS1-209ENST00000609445 BSPRYQ5W0U4 402 aa16.74■□□□□ 0.27
SGMS1-209ENST00000609445 TMEM270Q6UE05 265 aa16.74■□□□□ 0.27
SGMS1-209ENST00000609445 SLC36A4Q6YBV0 504 aa16.74■□□□□ 0.27
SGMS1-209ENST00000609445 FMNL3Q8IVF7 1028 aa16.74■□□□□ 0.27
SGMS1-209ENST00000609445 SLC41A1Q8IVJ1 513 aa16.74■□□□□ 0.27
SGMS1-209ENST00000609445 PLD4Q96BZ4 506 aa16.74■□□□□ 0.27
SGMS1-209ENST00000609445 MRGPRX1Q96LB2 322 aa16.74■□□□□ 0.27
SGMS1-209ENST00000609445 CEP63Q96MT8 703 aa16.74■□□□□ 0.27
SGMS1-209ENST00000609445 IPO9Q96P70 1041 aaKnown RBP16.74■□□□□ 0.27
SGMS1-209ENST00000609445 ZSWIM1Q9BR11 485 aa16.74■□□□□ 0.27
SGMS1-209ENST00000609445 METTL14Q9HCE5 456 aaKnown RBP16.74■□□□□ 0.27
SGMS1-209ENST00000609445 HOOK1Q9UJC3 728 aaKnown RBP16.74■□□□□ 0.27
SGMS1-209ENST00000609445 PCDHB4Q9Y5E5 795 aa16.74■□□□□ 0.27
SGMS1-209ENST00000609445 PCDH15Q96QU1 1955 aa16.73■□□□□ 0.27
SGMS1-209ENST00000609445 PIK3R2O00459 728 aa16.73■□□□□ 0.27
SGMS1-209ENST00000609445 MSI1O43347 362 aaKnown RBP16.73■□□□□ 0.27
SGMS1-209ENST00000609445 KRT37O76014 449 aa16.73■□□□□ 0.27
SGMS1-209ENST00000609445 CYBBP04839 570 aa16.73■□□□□ 0.27
SGMS1-209ENST00000609445 LCP1P13796 627 aa16.73■□□□□ 0.27
SGMS1-209ENST00000609445 ZNF33AQ06730 810 aa16.73■□□□□ 0.27
SGMS1-209ENST00000609445 LMAN2Q12907 356 aa16.73■□□□□ 0.27
SGMS1-209ENST00000609445 FUT11Q495W5 492 aa16.73■□□□□ 0.27
SGMS1-209ENST00000609445 TTI2Q6NXR4 508 aa16.73■□□□□ 0.27
SGMS1-209ENST00000609445 SLC23A3Q6PIS1 610 aa16.73■□□□□ 0.27
SGMS1-209ENST00000609445 FAM217AQ8IXS0 508 aa16.73■□□□□ 0.27
SGMS1-209ENST00000609445 SIX6OS1Q8N1H7 587 aa16.73■□□□□ 0.27
SGMS1-209ENST00000609445 CPXM2Q8N436 756 aa16.73■□□□□ 0.27
SGMS1-209ENST00000609445 LMO3Q8TAP4 145 aa16.73■□□□□ 0.27
SGMS1-209ENST00000609445 DDI1Q8WTU0 396 aa16.73■□□□□ 0.27
SGMS1-209ENST00000609445 SORCS1Q8WY21 1168 aa16.73■□□□□ 0.27
SGMS1-209ENST00000609445 DHTKD1Q96HY7 919 aaPredicted RBP16.73■□□□□ 0.27
SGMS1-209ENST00000609445 NT5C1BQ96P26 610 aa16.73■□□□□ 0.27
SGMS1-209ENST00000609445 GTPBP4Q9BZE4 634 aaKnown RBP16.73■□□□□ 0.27
SGMS1-209ENST00000609445 OLA1Q9NTK5 396 aaKnown RBP16.73■□□□□ 0.27
SGMS1-209ENST00000609445 THAP10Q9P2Z0 257 aaPredicted RBP16.73■□□□□ 0.27
SGMS1-209ENST00000609445 PPP1R3GB7ZBB8 358 aa16.72■□□□□ 0.27
SGMS1-209ENST00000609445 BIN1O00499 593 aa16.72■□□□□ 0.27
SGMS1-209ENST00000609445 GADD45BO75293 160 aaPredicted RBP16.72■□□□□ 0.27
SGMS1-209ENST00000609445 ZNF217O75362 1048 aa16.72■□□□□ 0.27
SGMS1-209ENST00000609445 SETSIPP0DME0 302 aa16.72■□□□□ 0.27
SGMS1-209ENST00000609445 BRD2P25440 801 aaKnown RBP16.72■□□□□ 0.27
SGMS1-209ENST00000609445 DAOAP59103 153 aa16.72■□□□□ 0.27
SGMS1-209ENST00000609445 ZNF252P-AS1Q0IIN9 211 aa16.72■□□□□ 0.27
SGMS1-209ENST00000609445 ZNF234Q14588 700 aa16.72■□□□□ 0.27
SGMS1-209ENST00000609445 TMEM215Q68D42 235 aa16.72■□□□□ 0.27
SGMS1-209ENST00000609445 PMF1Q6P1K2 205 aa16.72■□□□□ 0.27
SGMS1-209ENST00000609445 LCLAT1Q6UWP7 414 aa16.72■□□□□ 0.27
SGMS1-209ENST00000609445 ANKS1BQ7Z6G8 1248 aa16.72■□□□□ 0.27
SGMS1-209ENST00000609445 ARHGEF19Q8IW93 802 aa16.72■□□□□ 0.27
SGMS1-209ENST00000609445 PPM1KQ8N3J5 372 aa16.72■□□□□ 0.27
SGMS1-209ENST00000609445 TRIML1Q8N9V2 468 aa16.72■□□□□ 0.27
SGMS1-209ENST00000609445 DEFB124Q8NES8 71 aa16.72■□□□□ 0.27
SGMS1-209ENST00000609445 RNF139Q8WU17 664 aa16.72■□□□□ 0.27
SGMS1-209ENST00000609445 NELFBQ8WX92 580 aa16.72■□□□□ 0.27
SGMS1-209ENST00000609445 KCTD13Q8WZ19 329 aa16.72■□□□□ 0.27
SGMS1-209ENST00000609445 HSPA12BQ96MM6 686 aa16.72■□□□□ 0.27
SGMS1-209ENST00000609445 ELOVL2Q9NXB9 296 aa16.72■□□□□ 0.27
SGMS1-209ENST00000609445 CTNND2Q9UQB3 1225 aa16.72■□□□□ 0.27
SGMS1-209ENST00000609445 FRYQ5TBA9 3013 aa16.72■□□□□ 0.27
SGMS1-209ENST00000609445 IGF2RP11717 2491 aa16.71■□□□□ 0.27
SGMS1-209ENST00000609445 PAEPP09466 180 aa16.71■□□□□ 0.27
SGMS1-209ENST00000609445 HOXD9P28356 352 aaPredicted RBP16.71■□□□□ 0.27
SGMS1-209ENST00000609445 DPP6P42658 865 aa16.71■□□□□ 0.27
SGMS1-209ENST00000609445 STX17P56962 302 aa16.71■□□□□ 0.27
SGMS1-209ENST00000609445 SHC2P98077 582 aa16.71■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms