RNA–Protein interactions for RNA: ENST00000608461.1

HDDC2-206, Transcript of HD domain containing 2, humanhuman

TSL 2

Gene HDDC2, Length 587 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC2-206ENST00000608461 TAF3Q5VWG9 929 aa14.88□□□□□ -0.03
HDDC2-206ENST00000608461 OR6B2Q6IFH4 312 aa14.88□□□□□ -0.03
HDDC2-206ENST00000608461 DENND1CQ8IV53 801 aa14.88□□□□□ -0.03
HDDC2-206ENST00000608461 DQX1Q8TE96 717 aaKnown RBP14.88□□□□□ -0.03
HDDC2-206ENST00000608461 SLC2A13Q96QE2 648 aa14.88□□□□□ -0.03
HDDC2-206ENST00000608461 DDX50Q9BQ39 737 aaKnown RBP14.88□□□□□ -0.03
HDDC2-206ENST00000608461 BBS2Q9BXC9 721 aa14.88□□□□□ -0.03
HDDC2-206ENST00000608461 NUCKS1Q9H1E3 243 aaKnown RBP14.88□□□□□ -0.03
HDDC2-206ENST00000608461 FBRSL1Q9HCM7 1045 aaKnown RBP14.88□□□□□ -0.03
HDDC2-206ENST00000608461 PRMT8Q9NR22 394 aaPredicted RBP14.88□□□□□ -0.03
HDDC2-206ENST00000608461 NAALADL1Q9UQQ1 740 aa14.88□□□□□ -0.03
HDDC2-206ENST00000608461 H0Y858 1186 aa14.87□□□□□ -0.03
HDDC2-206ENST00000608461 SCAMP3O14828 347 aaKnown RBP14.87□□□□□ -0.03
HDDC2-206ENST00000608461 KAT7O95251 611 aa14.87□□□□□ -0.03
HDDC2-206ENST00000608461 EGFP01133 1207 aa14.87□□□□□ -0.03
HDDC2-206ENST00000608461 PENKP01210 267 aaPredicted RBP14.87□□□□□ -0.03
HDDC2-206ENST00000608461 IGLV3-25P01717 112 aa14.87□□□□□ -0.03
HDDC2-206ENST00000608461 ERBB2P04626 1255 aa14.87□□□□□ -0.03
HDDC2-206ENST00000608461 HMBSP08397 361 aa14.87□□□□□ -0.03
HDDC2-206ENST00000608461 TYRP14679 529 aa14.87□□□□□ -0.03
HDDC2-206ENST00000608461 HOXA6P31267 233 aa14.87□□□□□ -0.03
HDDC2-206ENST00000608461 NOS2P35228 1153 aa14.87□□□□□ -0.03
HDDC2-206ENST00000608461 MRPS21P82921 87 aaKnown RBP14.87□□□□□ -0.03
HDDC2-206ENST00000608461 CDK17Q00537 523 aa14.87□□□□□ -0.03
HDDC2-206ENST00000608461 FMO1Q01740 532 aa14.87□□□□□ -0.03
HDDC2-206ENST00000608461 NHLH1Q02575 133 aa14.87□□□□□ -0.03
HDDC2-206ENST00000608461 EIF4EBP2Q13542 120 aaPredicted RBP14.87□□□□□ -0.03
HDDC2-206ENST00000608461 MPPE1Q53F39 396 aa14.87□□□□□ -0.03
HDDC2-206ENST00000608461 DCAF6Q58WW2 860 aa14.87□□□□□ -0.03
HDDC2-206ENST00000608461 MPP7Q5T2T1 576 aa14.87□□□□□ -0.03
HDDC2-206ENST00000608461 SYPL2Q5VXT5 272 aa14.87□□□□□ -0.03
HDDC2-206ENST00000608461 ZC3H14Q6PJT7 736 aaKnown RBP14.87□□□□□ -0.03
HDDC2-206ENST00000608461 FAM183BPQ6ZVS7 135 aa14.87□□□□□ -0.03
HDDC2-206ENST00000608461 ZNF557Q8N988 423 aaPredicted RBP14.87□□□□□ -0.03
HDDC2-206ENST00000608461 BAP1Q92560 729 aa14.87□□□□□ -0.03
HDDC2-206ENST00000608461 ACDQ96AP0 544 aa14.87□□□□□ -0.03
HDDC2-206ENST00000608461 SLC39A13Q96H72 371 aa14.87□□□□□ -0.03
HDDC2-206ENST00000608461 SLC2A11Q9BYW1 496 aa14.87□□□□□ -0.03
HDDC2-206ENST00000608461 SEMA4AQ9H3S1 761 aa14.87□□□□□ -0.03
HDDC2-206ENST00000608461 ARHGEF4Q9NR80 690 aa14.87□□□□□ -0.03
HDDC2-206ENST00000608461 SLTMQ9NWH9 1034 aaKnown RBP eCLIP14.87□□□□□ -0.03
HDDC2-206ENST00000608461 AIPL1Q9NZN9 384 aa14.87□□□□□ -0.03
HDDC2-206ENST00000608461 FBXO10Q9UK96 956 aa14.87□□□□□ -0.03
HDDC2-206ENST00000608461 MUC6Q6W4X9 2439 aa14.87□□□□□ -0.03
HDDC2-206ENST00000608461 KIAA1549LQ6ZVL6 1849 aa14.87□□□□□ -0.03
HDDC2-206ENST00000608461 A0A1W2PQJ5 194 aa14.86□□□□□ -0.03
HDDC2-206ENST00000608461 NEDD8-MDP1E9PL57 170 aa14.86□□□□□ -0.03
HDDC2-206ENST00000608461 MSI1O43347 362 aaKnown RBP14.86□□□□□ -0.03
HDDC2-206ENST00000608461 TULP3O75386 442 aa14.86□□□□□ -0.03
HDDC2-206ENST00000608461 TRUB2O95900 331 aaKnown RBP14.86□□□□□ -0.03
HDDC2-206ENST00000608461 UNGP13051 313 aaPredicted RBP14.86□□□□□ -0.03
HDDC2-206ENST00000608461 CHRNB2P17787 502 aa14.86□□□□□ -0.03
HDDC2-206ENST00000608461 MMP8P22894 467 aa14.86□□□□□ -0.03
HDDC2-206ENST00000608461 MATKP42679 507 aa14.86□□□□□ -0.03
HDDC2-206ENST00000608461 GSCP56915 257 aaPredicted RBP14.86□□□□□ -0.03
HDDC2-206ENST00000608461 CENPCQ03188 943 aa14.86□□□□□ -0.03
HDDC2-206ENST00000608461 GAS6Q14393 721 aa14.86□□□□□ -0.03
HDDC2-206ENST00000608461 ACBD5Q5T8D3 534 aaPredicted RBP14.86□□□□□ -0.03
HDDC2-206ENST00000608461 TPGS1Q6ZTW0 290 aa14.86□□□□□ -0.03
HDDC2-206ENST00000608461 IRF2BP2Q7Z5L9 587 aa14.86□□□□□ -0.03
HDDC2-206ENST00000608461 MAML2Q8IZL2 1156 aaPredicted RBP14.86□□□□□ -0.03
HDDC2-206ENST00000608461 DEFB106AQ8N104 65 aa14.86□□□□□ -0.03
HDDC2-206ENST00000608461 PHTF2Q8N3S3 785 aa14.86□□□□□ -0.03
HDDC2-206ENST00000608461 SLC20A1Q8WUM9 679 aa14.86□□□□□ -0.03
HDDC2-206ENST00000608461 NELL1Q92832 810 aa14.86□□□□□ -0.03
HDDC2-206ENST00000608461 ATOH1Q92858 354 aaPredicted RBP14.86□□□□□ -0.03
HDDC2-206ENST00000608461 AGPAT1Q99943 283 aa14.86□□□□□ -0.03
HDDC2-206ENST00000608461 TTYH3Q9C0H2 523 aa14.86□□□□□ -0.03
HDDC2-206ENST00000608461 RBM12Q9NTZ6 932 aaKnown RBP14.86□□□□□ -0.03
HDDC2-206ENST00000608461 TJP2Q9UDY2 1190 aa14.86□□□□□ -0.03
HDDC2-206ENST00000608461 RAPGEFL1Q9UHV5 662 aa14.86□□□□□ -0.03
HDDC2-206ENST00000608461 SLC12A6Q9UHW9 1150 aa14.86□□□□□ -0.03
HDDC2-206ENST00000608461 STAP1Q9ULZ2 295 aa14.86□□□□□ -0.03
HDDC2-206ENST00000608461 SLC27A6Q9Y2P4 619 aa14.86□□□□□ -0.03
HDDC2-206ENST00000608461 STARD13Q9Y3M8 1113 aa14.86□□□□□ -0.03
HDDC2-206ENST00000608461 PAXBP1Q9Y5B6 917 aa14.86□□□□□ -0.03
HDDC2-206ENST00000608461 MYOFQ9NZM1 2061 aa14.86□□□□□ -0.03
HDDC2-206ENST00000608461 K7EQS6 105 aa14.85□□□□□ -0.03
HDDC2-206ENST00000608461 GFRA2O00451 464 aa14.85□□□□□ -0.03
HDDC2-206ENST00000608461 CBFA2T2O43439 604 aa14.85□□□□□ -0.03
HDDC2-206ENST00000608461 ACSL4O60488 711 aa14.85□□□□□ -0.03
HDDC2-206ENST00000608461 RNF40O75150 1001 aa14.85□□□□□ -0.03
HDDC2-206ENST00000608461 DAB1O75553 588 aa14.85□□□□□ -0.03
HDDC2-206ENST00000608461 F9P00740 461 aa14.85□□□□□ -0.03
HDDC2-206ENST00000608461 APOEP02649 317 aa14.85□□□□□ -0.03
HDDC2-206ENST00000608461 SP9P0CG40 484 aa14.85□□□□□ -0.03
HDDC2-206ENST00000608461 PLA2G5P39877 138 aa14.85□□□□□ -0.03
HDDC2-206ENST00000608461 PBX1P40424 430 aa14.85□□□□□ -0.03
HDDC2-206ENST00000608461 NBL1P41271 181 aa14.85□□□□□ -0.03
HDDC2-206ENST00000608461 PRKCIP41743 596 aa14.85□□□□□ -0.03
HDDC2-206ENST00000608461 NSFP46459 744 aaKnown RBP14.85□□□□□ -0.03
HDDC2-206ENST00000608461 SLC6A11P48066 632 aa14.85□□□□□ -0.03
HDDC2-206ENST00000608461 ARID5AQ03989 594 aa14.85□□□□□ -0.03
HDDC2-206ENST00000608461 TAF5Q15542 800 aa14.85□□□□□ -0.03
HDDC2-206ENST00000608461 FYB2Q5VWT5 728 aa14.85□□□□□ -0.03
HDDC2-206ENST00000608461 NAA35Q5VZE5 725 aa14.85□□□□□ -0.03
HDDC2-206ENST00000608461 GRAMD4Q6IC98 578 aa14.85□□□□□ -0.03
HDDC2-206ENST00000608461 SYT13Q7L8C5 426 aa14.85□□□□□ -0.03
HDDC2-206ENST00000608461 TRMT11Q7Z4G4 463 aaKnown RBP14.85□□□□□ -0.03
HDDC2-206ENST00000608461 TAC4Q86UU9 113 aa14.85□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms