RNA–Protein interactions for RNA: ENST00000608295.5

HDDC2-204, Transcript of HD domain containing 2, humanhuman

TSL 5 BASIC

Gene HDDC2, Length 879 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC2-204ENST00000608295 DQX1Q8TE96 717 aaKnown RBP15.11■□□□□ 0.01
HDDC2-204ENST00000608295 DDI1Q8WTU0 396 aa15.11■□□□□ 0.01
HDDC2-204ENST00000608295 IRGQQ8WZA9 623 aa15.11■□□□□ 0.01
HDDC2-204ENST00000608295 ACOX2Q99424 681 aa15.11■□□□□ 0.01
HDDC2-204ENST00000608295 FAM126AQ9BYI3 521 aaPredicted RBP15.11■□□□□ 0.01
HDDC2-204ENST00000608295 DCLK3Q9C098 648 aa15.11■□□□□ 0.01
HDDC2-204ENST00000608295 GANQ9H2C0 597 aa15.11■□□□□ 0.01
HDDC2-204ENST00000608295 EPC1Q9H2F5 836 aa15.11■□□□□ 0.01
HDDC2-204ENST00000608295 SYNCQ9H7C4 482 aa15.11■□□□□ 0.01
HDDC2-204ENST00000608295 RAB23Q9ULC3 237 aa15.11■□□□□ 0.01
HDDC2-204ENST00000608295 CLEC4EQ9ULY5 219 aa15.11■□□□□ 0.01
HDDC2-204ENST00000608295 SPAG17Q6Q759 2223 aa15.11■□□□□ 0.01
HDDC2-204ENST00000608295 F8VZ95 297 aa15.1■□□□□ 0.01
HDDC2-204ENST00000608295 DCLK1O15075 740 aa15.1■□□□□ 0.01
HDDC2-204ENST00000608295 PAPSS2O95340 614 aaPredicted RBP15.1■□□□□ 0.01
HDDC2-204ENST00000608295 APBB3O95704 486 aa15.1■□□□□ 0.01
HDDC2-204ENST00000608295 FYNP06241 537 aa15.1■□□□□ 0.01
HDDC2-204ENST00000608295 NUMBP49757 651 aa15.1■□□□□ 0.01
HDDC2-204ENST00000608295 TBX4P57082 545 aa15.1■□□□□ 0.01
HDDC2-204ENST00000608295 NCAPHQ15003 741 aa15.1■□□□□ 0.01
HDDC2-204ENST00000608295 SYCP1Q15431 976 aa15.1■□□□□ 0.01
HDDC2-204ENST00000608295 TRIP4Q15650 581 aaPredicted RBP15.1■□□□□ 0.01
HDDC2-204ENST00000608295 CCDC6Q16204 474 aa15.1■□□□□ 0.01
HDDC2-204ENST00000608295 PTPN20Q4JDL3 420 aa15.1■□□□□ 0.01
HDDC2-204ENST00000608295 CT47A1Q5JQC4 288 aaPredicted RBP15.1■□□□□ 0.01
HDDC2-204ENST00000608295 FYB2Q5VWT5 728 aa15.1■□□□□ 0.01
HDDC2-204ENST00000608295 MSANTD2Q6P1R3 559 aa15.1■□□□□ 0.01
HDDC2-204ENST00000608295 TMEM92Q6UXU6 159 aa15.1■□□□□ 0.01
HDDC2-204ENST00000608295 SYT13Q7L8C5 426 aa15.1■□□□□ 0.01
HDDC2-204ENST00000608295 NOP9Q86U38 636 aaKnown RBP15.1■□□□□ 0.01
HDDC2-204ENST00000608295 SLC20A1Q8WUM9 679 aa15.1■□□□□ 0.01
HDDC2-204ENST00000608295 HMGB4Q8WW32 186 aa15.1■□□□□ 0.01
HDDC2-204ENST00000608295 SLC4A5Q9BY07 1137 aa15.1■□□□□ 0.01
HDDC2-204ENST00000608295 MARK1Q9P0L2 795 aa15.1■□□□□ 0.01
HDDC2-204ENST00000608295 BCCIPQ9P287 314 aaKnown RBP eCLIP15.1■□□□□ 0.01
HDDC2-204ENST00000608295 WDR35Q9P2L0 1181 aa15.1■□□□□ 0.01
HDDC2-204ENST00000608295 MMP17Q9ULZ9 603 aa15.1■□□□□ 0.01
HDDC2-204ENST00000608295 HBS1LQ9Y450 684 aaKnown RBP15.1■□□□□ 0.01
HDDC2-204ENST00000608295 RAD54BQ9Y620 910 aa15.1■□□□□ 0.01
HDDC2-204ENST00000608295 RALGAPA1Q6GYQ0 2036 aa15.1■□□□□ 0.01
HDDC2-204ENST00000608295 PTPRZ1P23471 2315 aaPredicted RBP15.09■□□□□ 0.01
HDDC2-204ENST00000608295 OTOGLQ3ZCN5 2332 aa15.09■□□□□ 0.01
HDDC2-204ENST00000608295 TCRBV21S2A2A0A5A6 115 aa15.09■□□□□ 0.01
HDDC2-204ENST00000608295 SYCE3A1L190 88 aa15.09■□□□□ 0.01
HDDC2-204ENST00000608295 PRRT4C9JH25 899 aa15.09■□□□□ 0.01
HDDC2-204ENST00000608295 AXIN1O15169 862 aa15.09■□□□□ 0.01
HDDC2-204ENST00000608295 CYBBP04839 570 aa15.09■□□□□ 0.01
HDDC2-204ENST00000608295 GBP1P32455 592 aa15.09■□□□□ 0.01
HDDC2-204ENST00000608295 CHKAP35790 457 aa15.09■□□□□ 0.01
HDDC2-204ENST00000608295 KIR2DL1P43626 348 aaPredicted RBP15.09■□□□□ 0.01
HDDC2-204ENST00000608295 ARID5AQ03989 594 aa15.09■□□□□ 0.01
HDDC2-204ENST00000608295 GEN1Q17RS7 908 aa15.09■□□□□ 0.01
HDDC2-204ENST00000608295 MAMSTRQ6ZN01 415 aa15.09■□□□□ 0.01
HDDC2-204ENST00000608295 WDR5BQ86VZ2 330 aa15.09■□□□□ 0.01
HDDC2-204ENST00000608295 CACUL1Q86Y37 369 aa15.09■□□□□ 0.01
HDDC2-204ENST00000608295 FAM71AQ8IYT1 594 aa15.09■□□□□ 0.01
HDDC2-204ENST00000608295 CHPFQ8IZ52 775 aa15.09■□□□□ 0.01
HDDC2-204ENST00000608295 SCML4Q8N228 414 aa15.09■□□□□ 0.01
HDDC2-204ENST00000608295 PGBD3Q8N328 593 aa15.09■□□□□ 0.01
HDDC2-204ENST00000608295 ZNF276Q8N554 614 aa15.09■□□□□ 0.01
HDDC2-204ENST00000608295 WDTC1Q8N5D0 677 aa15.09■□□□□ 0.01
HDDC2-204ENST00000608295 ANKRD20A12PQ8NF67 263 aa15.09■□□□□ 0.01
HDDC2-204ENST00000608295 MDGA1Q8NFP4 955 aa15.09■□□□□ 0.01
HDDC2-204ENST00000608295 IPO4Q8TEX9 1081 aaKnown RBP15.09■□□□□ 0.01
HDDC2-204ENST00000608295 RUBCNQ92622 972 aa15.09■□□□□ 0.01
HDDC2-204ENST00000608295 PPP1R13BQ96KQ4 1090 aa15.09■□□□□ 0.01
HDDC2-204ENST00000608295 FAM204AQ9H8W3 233 aa15.09■□□□□ 0.01
HDDC2-204ENST00000608295 CACNA2D2Q9NY47 1150 aa15.09■□□□□ 0.01
HDDC2-204ENST00000608295 STIM2Q9P246 746 aa15.09■□□□□ 0.01
HDDC2-204ENST00000608295 XPO7Q9UIA9 1087 aaKnown RBP15.09■□□□□ 0.01
HDDC2-204ENST00000608295 GMEB2Q9UKD1 530 aa15.09■□□□□ 0.01
HDDC2-204ENST00000608295 ZNF510Q9Y2H8 683 aa15.09■□□□□ 0.01
HDDC2-204ENST00000608295 CEP83Q9Y592 693 aa15.09■□□□□ 0.01
HDDC2-204ENST00000608295 EP300Q09472 2414 aaPredicted RBP15.09■□□□□ 0.01
HDDC2-204ENST00000608295 LGALS16A8MUM7 142 aa15.08■□□□□ 0
HDDC2-204ENST00000608295 SART1O43290 800 aaKnown RBP15.08■□□□□ 0
HDDC2-204ENST00000608295 ADAM23O75077 832 aa15.08■□□□□ 0
HDDC2-204ENST00000608295 RPP40O75818 363 aaKnown RBP15.08■□□□□ 0
HDDC2-204ENST00000608295 PENKP01210 267 aaPredicted RBP15.08■□□□□ 0
HDDC2-204ENST00000608295 MMEP08473 750 aa15.08■□□□□ 0
HDDC2-204ENST00000608295 CHRM1P11229 460 aaPredicted RBP15.08■□□□□ 0
HDDC2-204ENST00000608295 HOXB2P14652 356 aa15.08■□□□□ 0
HDDC2-204ENST00000608295 CYP11B1P15538 503 aa15.08■□□□□ 0
HDDC2-204ENST00000608295 SLC6A4P31645 630 aa15.08■□□□□ 0
HDDC2-204ENST00000608295 GGCXP38435 758 aa15.08■□□□□ 0
HDDC2-204ENST00000608295 RNASE9P60153 205 aaKnown RBP15.08■□□□□ 0
HDDC2-204ENST00000608295 MRPS21P82921 87 aaKnown RBP15.08■□□□□ 0
HDDC2-204ENST00000608295 UBXN1Q04323 297 aa15.08■□□□□ 0
HDDC2-204ENST00000608295 CRY1Q16526 586 aa15.08■□□□□ 0
HDDC2-204ENST00000608295 DCAF6Q58WW2 860 aa15.08■□□□□ 0
HDDC2-204ENST00000608295 PHLDB2Q86SQ0 1253 aa15.08■□□□□ 0
HDDC2-204ENST00000608295 KBTBD6Q86V97 674 aa15.08■□□□□ 0
HDDC2-204ENST00000608295 RLN3Q8WXF3 142 aa15.08■□□□□ 0
HDDC2-204ENST00000608295 SORCS1Q8WY21 1168 aa15.08■□□□□ 0
HDDC2-204ENST00000608295 MYEOVQ96EZ4 313 aa15.08■□□□□ 0
HDDC2-204ENST00000608295 FCRL2Q96LA5 508 aaPredicted RBP15.08■□□□□ 0
HDDC2-204ENST00000608295 PRICKLE1Q96MT3 831 aaPredicted RBP15.08■□□□□ 0
HDDC2-204ENST00000608295 SERPINB11Q96P15 392 aa15.08■□□□□ 0
HDDC2-204ENST00000608295 SPAG5Q96R06 1193 aa15.08■□□□□ 0
HDDC2-204ENST00000608295 NAA15Q9BXJ9 866 aaKnown RBP15.08■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms