RNA–Protein interactions for RNA: ENST00000607482.5

CTSA-217, Transcript of cathepsin A, humanhuman

TSL 3

Gene CTSA, Length 403 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-217ENST00000607482 FOXK2Q01167 660 aa20.04■□□□□ 0.8
CTSA-217ENST00000607482 PTK2Q05397 1052 aa20.04■□□□□ 0.8
CTSA-217ENST00000607482 STARD3Q14849 445 aa20.04■□□□□ 0.8
CTSA-217ENST00000607482 TRIP4Q15650 581 aaPredicted RBP20.04■□□□□ 0.8
CTSA-217ENST00000607482 CCDC6Q16204 474 aa20.04■□□□□ 0.8
CTSA-217ENST00000607482 PLK5Q496M5 336 aa20.04■□□□□ 0.8
CTSA-217ENST00000607482 VWA3BQ502W6 1294 aa20.04■□□□□ 0.8
CTSA-217ENST00000607482 EGFLAMQ63HQ2 1017 aa20.04■□□□□ 0.8
CTSA-217ENST00000607482 DENND1BQ6P3S1 775 aa20.04■□□□□ 0.8
CTSA-217ENST00000607482 PRR23CQ6ZRP0 262 aa20.04■□□□□ 0.8
CTSA-217ENST00000607482 ERMP1Q7Z2K6 904 aa20.04■□□□□ 0.8
CTSA-217ENST00000607482 CPXM2Q8N436 756 aa20.04■□□□□ 0.8
CTSA-217ENST00000607482 ZNF606Q8WXB4 792 aa20.04■□□□□ 0.8
CTSA-217ENST00000607482 ZC3H10Q96K80 434 aaKnown RBP20.04■□□□□ 0.8
CTSA-217ENST00000607482 NOX5Q96PH1 765 aa20.04■□□□□ 0.8
CTSA-217ENST00000607482 TUBGCP2Q9BSJ2 902 aa20.04■□□□□ 0.8
CTSA-217ENST00000607482 PDCL3Q9H2J4 239 aa20.04■□□□□ 0.8
CTSA-217ENST00000607482 CNTN6Q9UQ52 1028 aa20.04■□□□□ 0.8
CTSA-217ENST00000607482 STARD13Q9Y3M8 1113 aa20.04■□□□□ 0.8
CTSA-217ENST00000607482 SPTBN4Q9H254 2564 aa20.04■□□□□ 0.8
CTSA-217ENST00000607482 ADAM23O75077 832 aa20.03■□□□□ 0.8
CTSA-217ENST00000607482 EPN2O95208 641 aa20.03■□□□□ 0.8
CTSA-217ENST00000607482 PON1P27169 355 aa20.03■□□□□ 0.8
CTSA-217ENST00000607482 KRT9P35527 623 aa20.03■□□□□ 0.8
CTSA-217ENST00000607482 TBX4P57082 545 aa20.03■□□□□ 0.8
CTSA-217ENST00000607482 SNX16P57768 344 aa20.03■□□□□ 0.8
CTSA-217ENST00000607482 ADGRF1Q5T601 910 aa20.03■□□□□ 0.8
CTSA-217ENST00000607482 NUGGCQ68CJ6 796 aa20.03■□□□□ 0.8
CTSA-217ENST00000607482 BHLHA9Q7RTU4 235 aa20.03■□□□□ 0.8
CTSA-217ENST00000607482 ANKS1BQ7Z6G8 1248 aa20.03■□□□□ 0.8
CTSA-217ENST00000607482 RASSF3Q86WH2 238 aa20.03■□□□□ 0.8
CTSA-217ENST00000607482 CCDC117Q8IWD4 279 aaPredicted RBP20.03■□□□□ 0.8
CTSA-217ENST00000607482 CLEC4CQ8WTT0 213 aa20.03■□□□□ 0.8
CTSA-217ENST00000607482 ERLEC1Q96DZ1 483 aa20.03■□□□□ 0.8
CTSA-217ENST00000607482 TMA16Q96EY4 203 aaKnown RBP20.03■□□□□ 0.8
CTSA-217ENST00000607482 MED15Q96RN5 788 aa20.03■□□□□ 0.8
CTSA-217ENST00000607482 DDX50Q9BQ39 737 aaKnown RBP20.03■□□□□ 0.8
CTSA-217ENST00000607482 CIPCQ9C0C6 399 aa20.03■□□□□ 0.8
CTSA-217ENST00000607482 NDST4Q9H3R1 872 aa20.03■□□□□ 0.8
CTSA-217ENST00000607482 SYNCQ9H7C4 482 aa20.03■□□□□ 0.8
CTSA-217ENST00000607482 LMBRD1Q9NUN5 540 aa20.03■□□□□ 0.8
CTSA-217ENST00000607482 CEP83Q9Y592 693 aa20.03■□□□□ 0.8
CTSA-217ENST00000607482 PCDHGA5Q9Y5G8 931 aa20.03■□□□□ 0.8
CTSA-217ENST00000607482 TYW5A2RUC4 315 aaKnown RBP20.02■□□□□ 0.8
CTSA-217ENST00000607482 KCNJ18B7U540 433 aa20.02■□□□□ 0.8
CTSA-217ENST00000607482 PRRT4C9JH25 899 aa20.02■□□□□ 0.8
CTSA-217ENST00000607482 PENKP01210 267 aaPredicted RBP20.02■□□□□ 0.8
CTSA-217ENST00000607482 MPLP40238 635 aa20.02■□□□□ 0.8
CTSA-217ENST00000607482 GPD2P43304 727 aa20.02■□□□□ 0.8
CTSA-217ENST00000607482 DHPSP49366 369 aaPredicted RBP20.02■□□□□ 0.8
CTSA-217ENST00000607482 KCNJ12Q14500 433 aa20.02■□□□□ 0.8
CTSA-217ENST00000607482 CT47A1Q5JQC4 288 aaPredicted RBP20.02■□□□□ 0.8
CTSA-217ENST00000607482 FYB2Q5VWT5 728 aa20.02■□□□□ 0.8
CTSA-217ENST00000607482 SASS6Q6UVJ0 657 aa20.02■□□□□ 0.8
CTSA-217ENST00000607482 CLEC17AQ6ZS10 378 aa20.02■□□□□ 0.8
CTSA-217ENST00000607482 LPCAT2Q7L5N7 544 aa20.02■□□□□ 0.8
CTSA-217ENST00000607482 IRF2BP1Q8IU81 584 aa20.02■□□□□ 0.8
CTSA-217ENST00000607482 STK32AQ8WU08 396 aa20.02■□□□□ 0.8
CTSA-217ENST00000607482 RLN3Q8WXF3 142 aa20.02■□□□□ 0.8
CTSA-217ENST00000607482 SLC2A11Q9BYW1 496 aa20.02■□□□□ 0.8
CTSA-217ENST00000607482 DUSP15Q9H1R2 295 aaPredicted RBP20.02■□□□□ 0.8
CTSA-217ENST00000607482 DNAJC12Q9UKB3 198 aa20.02■□□□□ 0.8
CTSA-217ENST00000607482 SYNCRIPO60506 623 aaKnown RBP20.01■□□□□ 0.79
CTSA-217ENST00000607482 LATS1O95835 1130 aa20.01■□□□□ 0.79
CTSA-217ENST00000607482 CISD3P0C7P0 127 aa20.01■□□□□ 0.79
CTSA-217ENST00000607482 APBA1Q02410 837 aa20.01■□□□□ 0.79
CTSA-217ENST00000607482 RAPGEF1Q13905 1077 aa20.01■□□□□ 0.79
CTSA-217ENST00000607482 NETO1Q8TDF5 533 aa20.01■□□□□ 0.79
CTSA-217ENST00000607482 SERPINB11Q96P15 392 aa20.01■□□□□ 0.79
CTSA-217ENST00000607482 VPS45Q9NRW7 570 aa20.01■□□□□ 0.79
CTSA-217ENST00000607482 CACNA2D2Q9NY47 1150 aa20.01■□□□□ 0.79
CTSA-217ENST00000607482 SLC27A6Q9Y2P4 619 aa20.01■□□□□ 0.79
CTSA-217ENST00000607482 NPC1O15118 1278 aa20■□□□□ 0.79
CTSA-217ENST00000607482 TIMM44O43615 452 aa20■□□□□ 0.79
CTSA-217ENST00000607482 CAVIN2O95810 425 aa20■□□□□ 0.79
CTSA-217ENST00000607482 HNRNPLP14866 589 aaKnown RBP eCLIP20■□□□□ 0.79
CTSA-217ENST00000607482 TGM1P22735 817 aa20■□□□□ 0.79
CTSA-217ENST00000607482 BPIFB4P59827 614 aa20■□□□□ 0.79
CTSA-217ENST00000607482 MEA1Q16626 185 aa20■□□□□ 0.79
CTSA-217ENST00000607482 IL31Q6EBC2 164 aa20■□□□□ 0.79
CTSA-217ENST00000607482 MSANTD2Q6P1R3 559 aa20■□□□□ 0.79
CTSA-217ENST00000607482 CYP2U1Q7Z449 544 aa20■□□□□ 0.79
CTSA-217ENST00000607482 PASD1Q8IV76 773 aa20■□□□□ 0.79
CTSA-217ENST00000607482 ACOX2Q99424 681 aa20■□□□□ 0.79
CTSA-217ENST00000607482 ACP6Q9NPH0 428 aa20■□□□□ 0.79
CTSA-217ENST00000607482 SDK1Q7Z5N4 2213 aa19.99■□□□□ 0.79
CTSA-217ENST00000607482 E5RJQ4 531 aa19.99■□□□□ 0.79
CTSA-217ENST00000607482 GFRA2O00451 464 aa19.99■□□□□ 0.79
CTSA-217ENST00000607482 APOEP02649 317 aa19.99■□□□□ 0.79
CTSA-217ENST00000607482 ZNF806P0C7X5 589 aa19.99■□□□□ 0.79
CTSA-217ENST00000607482 EEF1GP26641 437 aaKnown RBP19.99■□□□□ 0.79
CTSA-217ENST00000607482 YWHAZP63104 245 aaKnown RBP19.99■□□□□ 0.79
CTSA-217ENST00000607482 SF3A2Q15428 464 aaKnown RBP19.99■□□□□ 0.79
CTSA-217ENST00000607482 ANKRD20A12PQ8NF67 263 aa19.99■□□□□ 0.79
CTSA-217ENST00000607482 ADAM32Q8TC27 787 aa19.99■□□□□ 0.79
CTSA-217ENST00000607482 IPO4Q8TEX9 1081 aaKnown RBP19.99■□□□□ 0.79
CTSA-217ENST00000607482 SHC3Q92529 594 aa19.99■□□□□ 0.79
CTSA-217ENST00000607482 RNF34Q969K3 372 aa19.99■□□□□ 0.79
CTSA-217ENST00000607482 PPP1R13BQ96KQ4 1090 aa19.99■□□□□ 0.79
CTSA-217ENST00000607482 RTKNQ9BST9 563 aa19.99■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms