RNA–Protein interactions for RNA: ENST00000605814.1

HMGB1P50-201, Transcript of high mobility group box 1 pseudogene 50, humanhuman

BASIC

Gene HMGB1P50, Length 607 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P50-201ENST00000605814 TP53I13Q8NBR0 393 aaPredicted RBP4.25□□□□□ -1.73
HMGB1P50-201ENST00000605814 BBOF1Q8ND07 529 aa4.25□□□□□ -1.73
HMGB1P50-201ENST00000605814 PLBD2Q8NHP8 589 aa4.25□□□□□ -1.73
HMGB1P50-201ENST00000605814 ZFP28Q8NHY6 868 aa4.25□□□□□ -1.73
HMGB1P50-201ENST00000605814 CCDC110Q8TBZ0 833 aa4.25□□□□□ -1.73
HMGB1P50-201ENST00000605814 ZNF526Q8TF50 670 aaPredicted RBP4.25□□□□□ -1.73
HMGB1P50-201ENST00000605814 FAM172AQ8WUF8 416 aa4.25□□□□□ -1.73
HMGB1P50-201ENST00000605814 IP6K1Q92551 441 aa4.25□□□□□ -1.73
HMGB1P50-201ENST00000605814 ALG3Q92685 438 aa4.25□□□□□ -1.73
HMGB1P50-201ENST00000605814 STAMQ92783 540 aa4.25□□□□□ -1.73
HMGB1P50-201ENST00000605814 ATP6V0A1Q93050 837 aa4.25□□□□□ -1.73
HMGB1P50-201ENST00000605814 HPS3Q969F9 1004 aa4.25□□□□□ -1.73
HMGB1P50-201ENST00000605814 TSG101Q99816 390 aa4.25□□□□□ -1.73
HMGB1P50-201ENST00000605814 TRAIPQ9BWF2 469 aa4.25□□□□□ -1.73
HMGB1P50-201ENST00000605814 LRRC3Q9BY71 257 aa4.25□□□□□ -1.73
HMGB1P50-201ENST00000605814 TRIM55Q9BYV6 548 aa4.25□□□□□ -1.73
HMGB1P50-201ENST00000605814 CELF4Q9BZC1 486 aaKnown RBP4.25□□□□□ -1.73
HMGB1P50-201ENST00000605814 OSBPL8Q9BZF1 889 aa4.25□□□□□ -1.73
HMGB1P50-201ENST00000605814 OSBPL6Q9BZF3 934 aa4.25□□□□□ -1.73
HMGB1P50-201ENST00000605814 KLHL4Q9C0H6 718 aa4.25□□□□□ -1.73
HMGB1P50-201ENST00000605814 GBA3Q9H227 469 aa4.25□□□□□ -1.73
HMGB1P50-201ENST00000605814 VPS11Q9H270 941 aa4.25□□□□□ -1.73
HMGB1P50-201ENST00000605814 CLK4Q9HAZ1 481 aaKnown RBP4.25□□□□□ -1.73
HMGB1P50-201ENST00000605814 PARVBQ9HBI1 364 aa4.25□□□□□ -1.73
HMGB1P50-201ENST00000605814 FAM207AQ9NSI2 230 aaPredicted RBP4.25□□□□□ -1.73
HMGB1P50-201ENST00000605814 TYW1Q9NV66 732 aaKnown RBP4.25□□□□□ -1.73
HMGB1P50-201ENST00000605814 PRR13Q9NZ81 148 aa4.25□□□□□ -1.73
HMGB1P50-201ENST00000605814 CLIC5Q9NZA1 410 aa4.25□□□□□ -1.73
HMGB1P50-201ENST00000605814 TBC1D7Q9P0N9 293 aa4.25□□□□□ -1.73
HMGB1P50-201ENST00000605814 ADAMTS1Q9UHI8 967 aa4.25□□□□□ -1.73
HMGB1P50-201ENST00000605814 GGT7Q9UJ14 662 aa4.25□□□□□ -1.73
HMGB1P50-201ENST00000605814 ZFP69BQ9UJL9 534 aa4.25□□□□□ -1.73
HMGB1P50-201ENST00000605814 HDAC9Q9UKV0 1011 aa4.25□□□□□ -1.73
HMGB1P50-201ENST00000605814 CNOT11Q9UKZ1 510 aaKnown RBP4.25□□□□□ -1.73
HMGB1P50-201ENST00000605814 CDH7Q9ULB5 785 aa4.25□□□□□ -1.73
HMGB1P50-201ENST00000605814 RAB26Q9ULW5 256 aa4.25□□□□□ -1.73
HMGB1P50-201ENST00000605814 EXOC7Q9UPT5 735 aa4.25□□□□□ -1.73
HMGB1P50-201ENST00000605814 NAALADL1Q9UQQ1 740 aa4.25□□□□□ -1.73
HMGB1P50-201ENST00000605814 B3GNT3Q9Y2A9 372 aa4.25□□□□□ -1.73
HMGB1P50-201ENST00000605814 MYRFQ9Y2G1 1151 aa4.25□□□□□ -1.73
HMGB1P50-201ENST00000605814 SNX24Q9Y343 169 aa4.25□□□□□ -1.73
HMGB1P50-201ENST00000605814 MARF1Q9Y4F3 1742 aaKnown RBP4.25□□□□□ -1.73
HMGB1P50-201ENST00000605814 SNX9Q9Y5X1 595 aa4.25□□□□□ -1.73
HMGB1P50-201ENST00000605814 SQORQ9Y6N5 450 aa4.25□□□□□ -1.73
HMGB1P50-201ENST00000605814 PFASO15067 1338 aa4.24□□□□□ -1.73
HMGB1P50-201ENST00000605814 PCDH11YQ9BZA8 1340 aa4.24□□□□□ -1.73
HMGB1P50-201ENST00000605814 DIP2CQ9Y2E4 1556 aa4.24□□□□□ -1.73
HMGB1P50-201ENST00000605814 MYH14Q7Z406 1995 aaKnown RBP4.24□□□□□ -1.73
HMGB1P50-201ENST00000605814 DOCK2Q92608 1830 aa4.24□□□□□ -1.73
HMGB1P50-201ENST00000605814 A0A1B0GTL3 188 aa4.24□□□□□ -1.73
HMGB1P50-201ENST00000605814 IQCA1LA6NCM1 817 aa4.24□□□□□ -1.73
HMGB1P50-201ENST00000605814 TRIM64BA6NI03 449 aa4.24□□□□□ -1.73
HMGB1P50-201ENST00000605814 TRIM64CA6NLI5 447 aa4.24□□□□□ -1.73
HMGB1P50-201ENST00000605814 EIF4E1BA6NMX2 242 aaKnown RBP4.24□□□□□ -1.73
HMGB1P50-201ENST00000605814 CENPBD1B2RD01 187 aa4.24□□□□□ -1.73
HMGB1P50-201ENST00000605814 UBE2Q2LH0YL09 131 aa4.24□□□□□ -1.73
HMGB1P50-201ENST00000605814 KLF11O14901 512 aa4.24□□□□□ -1.73
HMGB1P50-201ENST00000605814 SLC22A1O15245 554 aa4.24□□□□□ -1.73
HMGB1P50-201ENST00000605814 TP73O15350 636 aa4.24□□□□□ -1.73
HMGB1P50-201ENST00000605814 MGEA5O60502 916 aa4.24□□□□□ -1.73
HMGB1P50-201ENST00000605814 EXOC3O60645 756 aa4.24□□□□□ -1.73
HMGB1P50-201ENST00000605814 IDH1O75874 414 aaKnown RBP4.24□□□□□ -1.73
HMGB1P50-201ENST00000605814 DDAH1O94760 285 aa4.24□□□□□ -1.73
HMGB1P50-201ENST00000605814 ESRRBO95718 433 aa4.24□□□□□ -1.73
HMGB1P50-201ENST00000605814 CLPTM1O96005 669 aa4.24□□□□□ -1.73
HMGB1P50-201ENST00000605814 ANXA1P04083 346 aa4.24□□□□□ -1.73
HMGB1P50-201ENST00000605814 PCCAP05165 728 aaPredicted RBP4.24□□□□□ -1.73
HMGB1P50-201ENST00000605814 DBHP09172 617 aa4.24□□□□□ -1.73
HMGB1P50-201ENST00000605814 UQCRFS1P1P0C7P4 283 aa4.24□□□□□ -1.73
HMGB1P50-201ENST00000605814 MYBL1P10243 752 aa4.24□□□□□ -1.73
HMGB1P50-201ENST00000605814 CYP2C9P11712 490 aa4.24□□□□□ -1.73
HMGB1P50-201ENST00000605814 NCAM1P13591 858 aa4.24□□□□□ -1.73
HMGB1P50-201ENST00000605814 NME1P15531 152 aaKnown RBP4.24□□□□□ -1.73
HMGB1P50-201ENST00000605814 IVDP26440 423 aa4.24□□□□□ -1.73
HMGB1P50-201ENST00000605814 PRDX6P30041 224 aa4.24□□□□□ -1.73
HMGB1P50-201ENST00000605814 MAN1A1P33908 653 aa4.24□□□□□ -1.73
HMGB1P50-201ENST00000605814 CNR2P34972 360 aa4.24□□□□□ -1.73
HMGB1P50-201ENST00000605814 PGM1P36871 562 aa4.24□□□□□ -1.73
HMGB1P50-201ENST00000605814 COILP38432 576 aaPredicted RBP4.24□□□□□ -1.73
HMGB1P50-201ENST00000605814 EPS15P42566 896 aa4.24□□□□□ -1.73
HMGB1P50-201ENST00000605814 CTSKP43235 329 aa4.24□□□□□ -1.73
HMGB1P50-201ENST00000605814 ALDH3B2P48448 385 aa4.24□□□□□ -1.73
HMGB1P50-201ENST00000605814 CDK9P50750 372 aaKnown RBP4.24□□□□□ -1.73
HMGB1P50-201ENST00000605814 BCAP31P51572 246 aa4.24□□□□□ -1.73
HMGB1P50-201ENST00000605814 NEK3P51956 506 aa4.24□□□□□ -1.73
HMGB1P50-201ENST00000605814 VCPP55072 806 aaKnown RBP4.24□□□□□ -1.73
HMGB1P50-201ENST00000605814 RNASE9P60153 205 aaKnown RBP4.24□□□□□ -1.73
HMGB1P50-201ENST00000605814 KRTAP10-2P60368 255 aa4.24□□□□□ -1.73
HMGB1P50-201ENST00000605814 POLR2FP61218 127 aaKnown RBP4.24□□□□□ -1.73
HMGB1P50-201ENST00000605814 CAP1Q01518 475 aa4.24□□□□□ -1.73
HMGB1P50-201ENST00000605814 ITGA7Q13683 1181 aa4.24□□□□□ -1.73
HMGB1P50-201ENST00000605814 APOFQ13790 326 aa4.24□□□□□ -1.73
HMGB1P50-201ENST00000605814 PDK3Q15120 406 aa4.24□□□□□ -1.73
HMGB1P50-201ENST00000605814 TGFBIQ15582 683 aa4.24□□□□□ -1.73
HMGB1P50-201ENST00000605814 PFKFB3Q16875 520 aaPredicted RBP4.24□□□□□ -1.73
HMGB1P50-201ENST00000605814 EDRF1Q3B7T1 1238 aa4.24□□□□□ -1.73
HMGB1P50-201ENST00000605814 ARL13BQ3SXY8 428 aa4.24□□□□□ -1.73
HMGB1P50-201ENST00000605814 CCDC14Q49A88 953 aa4.24□□□□□ -1.73
HMGB1P50-201ENST00000605814 DNAL1Q4LDG9 190 aa4.24□□□□□ -1.73
HMGB1P50-201ENST00000605814 TDRD12Q587J7 1177 aaKnown RBP4.24□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms