RNA–Protein interactions for RNA: ENST00000604306.1

NEDD8-MDP1-203, Transcript of NEDD8-MDP1 readthrough, humanhuman

TSL 5

Gene NEDD8-MDP1, Length 681 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-MDP1-203ENST00000604306 ATAD1Q8NBU5 361 aa12.75□□□□□ -0.37
NEDD8-MDP1-203ENST00000604306 PCDH19Q8TAB3 1148 aa12.75□□□□□ -0.37
NEDD8-MDP1-203ENST00000604306 SCAMP5Q8TAC9 235 aa12.75□□□□□ -0.37
NEDD8-MDP1-203ENST00000604306 RNF139Q8WU17 664 aa12.75□□□□□ -0.37
NEDD8-MDP1-203ENST00000604306 ATG4AQ8WYN0 398 aa12.75□□□□□ -0.37
NEDD8-MDP1-203ENST00000604306 NDRG1Q92597 394 aaKnown RBP12.75□□□□□ -0.37
NEDD8-MDP1-203ENST00000604306 BADQ92934 168 aa12.75□□□□□ -0.37
NEDD8-MDP1-203ENST00000604306 ACSF2Q96CM8 615 aaPredicted RBP12.75□□□□□ -0.37
NEDD8-MDP1-203ENST00000604306 MYRFLQ96LU7 910 aa12.75□□□□□ -0.37
NEDD8-MDP1-203ENST00000604306 CCDC114Q96M63 670 aa12.75□□□□□ -0.37
NEDD8-MDP1-203ENST00000604306 CSPG4P5Q96PW8 444 aa12.75□□□□□ -0.37
NEDD8-MDP1-203ENST00000604306 RAD9AQ99638 391 aa12.75□□□□□ -0.37
NEDD8-MDP1-203ENST00000604306 CLSTN3Q9BQT9 956 aa12.75□□□□□ -0.37
NEDD8-MDP1-203ENST00000604306 TRIM51Q9BSJ1 452 aa12.75□□□□□ -0.37
NEDD8-MDP1-203ENST00000604306 UBE2OQ9C0C9 1292 aaKnown RBP12.75□□□□□ -0.37
NEDD8-MDP1-203ENST00000604306 DHX35Q9H5Z1 703 aaKnown RBP12.75□□□□□ -0.37
NEDD8-MDP1-203ENST00000604306 WDCPQ9H6R7 721 aa12.75□□□□□ -0.37
NEDD8-MDP1-203ENST00000604306 MRPL17Q9NRX2 175 aaKnown RBP12.75□□□□□ -0.37
NEDD8-MDP1-203ENST00000604306 ZDHHC18Q9NUE0 388 aa12.75□□□□□ -0.37
NEDD8-MDP1-203ENST00000604306 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP12.75□□□□□ -0.37
NEDD8-MDP1-203ENST00000604306 GRHL1Q9NZI5 618 aa12.75□□□□□ -0.37
NEDD8-MDP1-203ENST00000604306 CALCOCO1Q9P1Z2 691 aa12.75□□□□□ -0.37
NEDD8-MDP1-203ENST00000604306 MTRF1LQ9UGC7 380 aaKnown RBP12.75□□□□□ -0.37
NEDD8-MDP1-203ENST00000604306 DNPEPQ9ULA0 475 aa12.75□□□□□ -0.37
NEDD8-MDP1-203ENST00000604306 NFU1Q9UMS0 254 aa12.75□□□□□ -0.37
NEDD8-MDP1-203ENST00000604306 TLR6Q9Y2C9 796 aa12.75□□□□□ -0.37
NEDD8-MDP1-203ENST00000604306 IRAK3Q9Y616 596 aa12.75□□□□□ -0.37
NEDD8-MDP1-203ENST00000604306 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP12.74□□□□□ -0.37
NEDD8-MDP1-203ENST00000604306 BCLAF3A2AJT9 711 aaKnown RBP12.74□□□□□ -0.37
NEDD8-MDP1-203ENST00000604306 ZSCAN5CA6NGD5 496 aaPredicted RBP12.74□□□□□ -0.37
NEDD8-MDP1-203ENST00000604306 NCAM2O15394 837 aa12.74□□□□□ -0.37
NEDD8-MDP1-203ENST00000604306 ZMYND10O75800 440 aa12.74□□□□□ -0.37
NEDD8-MDP1-203ENST00000604306 CSH1P0DML2 217 aa12.74□□□□□ -0.37
NEDD8-MDP1-203ENST00000604306 CSH2P0DML3 217 aa12.74□□□□□ -0.37
NEDD8-MDP1-203ENST00000604306 CTSAP10619 480 aa12.74□□□□□ -0.37
NEDD8-MDP1-203ENST00000604306 IVDP26440 423 aa12.74□□□□□ -0.37
NEDD8-MDP1-203ENST00000604306 HOXC13P31276 330 aa12.74□□□□□ -0.37
NEDD8-MDP1-203ENST00000604306 OR1D2P34982 312 aa12.74□□□□□ -0.37
NEDD8-MDP1-203ENST00000604306 UBE3AQ05086 875 aa12.74□□□□□ -0.37
NEDD8-MDP1-203ENST00000604306 RING1Q06587 406 aa12.74□□□□□ -0.37
NEDD8-MDP1-203ENST00000604306 ZNF33AQ06730 810 aa12.74□□□□□ -0.37
NEDD8-MDP1-203ENST00000604306 GPS2Q13227 327 aa12.74□□□□□ -0.37
NEDD8-MDP1-203ENST00000604306 DPYSQ14117 519 aa12.74□□□□□ -0.37
NEDD8-MDP1-203ENST00000604306 HLTFQ14527 1009 aaKnown RBP eCLIP12.74□□□□□ -0.37
NEDD8-MDP1-203ENST00000604306 CASP8Q14790 479 aa12.74□□□□□ -0.37
NEDD8-MDP1-203ENST00000604306 PAFAH1B3Q15102 231 aaKnown RBP12.74□□□□□ -0.37
NEDD8-MDP1-203ENST00000604306 RAB6CQ53S08 254 aa12.74□□□□□ -0.37
NEDD8-MDP1-203ENST00000604306 RASIP1Q5U651 963 aa12.74□□□□□ -0.37
NEDD8-MDP1-203ENST00000604306 PRSS55Q6UWB4 352 aaPredicted RBP12.74□□□□□ -0.37
NEDD8-MDP1-203ENST00000604306 PDZD4Q76G19 769 aaPredicted RBP12.74□□□□□ -0.37
NEDD8-MDP1-203ENST00000604306 OTOP2Q7RTS6 562 aa12.74□□□□□ -0.37
NEDD8-MDP1-203ENST00000604306 PCGF5Q86SE9 256 aa12.74□□□□□ -0.37
NEDD8-MDP1-203ENST00000604306 TCEAL8Q8IYN2 117 aa12.74□□□□□ -0.37
NEDD8-MDP1-203ENST00000604306 IFT81Q8WYA0 676 aa12.74□□□□□ -0.37
NEDD8-MDP1-203ENST00000604306 ART4Q93070 314 aa12.74□□□□□ -0.37
NEDD8-MDP1-203ENST00000604306 B3GALT6Q96L58 329 aa12.74□□□□□ -0.37
NEDD8-MDP1-203ENST00000604306 PGLYRP2Q96PD5 576 aa12.74□□□□□ -0.37
NEDD8-MDP1-203ENST00000604306 KCTD15Q96SI1 283 aaPredicted RBP12.74□□□□□ -0.37
NEDD8-MDP1-203ENST00000604306 FMO2Q99518 471 aa12.74□□□□□ -0.37
NEDD8-MDP1-203ENST00000604306 EPAS1Q99814 870 aa12.74□□□□□ -0.37
NEDD8-MDP1-203ENST00000604306 BRD8Q9H0E9 1235 aa12.74□□□□□ -0.37
NEDD8-MDP1-203ENST00000604306 RAB6CQ9H0N0 254 aa12.74□□□□□ -0.37
NEDD8-MDP1-203ENST00000604306 ZBP1Q9H171 429 aa12.74□□□□□ -0.37
NEDD8-MDP1-203ENST00000604306 RETREG1Q9H6L5 497 aa12.74□□□□□ -0.37
NEDD8-MDP1-203ENST00000604306 FAM53CQ9NYF3 392 aa12.74□□□□□ -0.37
NEDD8-MDP1-203ENST00000604306 DONSONQ9NYP3 566 aa12.74□□□□□ -0.37
NEDD8-MDP1-203ENST00000604306 ZNF148Q9UQR1 794 aa12.74□□□□□ -0.37
NEDD8-MDP1-203ENST00000604306 SHROOM3Q8TF72 1996 aa12.73□□□□□ -0.37
NEDD8-MDP1-203ENST00000604306 ESYT3A0FGR9 886 aa12.73□□□□□ -0.37
NEDD8-MDP1-203ENST00000604306 SLC38A8A6NNN8 435 aa12.73□□□□□ -0.37
NEDD8-MDP1-203ENST00000604306 ZBBXA8MT70 800 aa12.73□□□□□ -0.37
NEDD8-MDP1-203ENST00000604306 FGF10O15520 208 aaPredicted RBP12.73□□□□□ -0.37
NEDD8-MDP1-203ENST00000604306 LILRB3O75022 631 aa12.73□□□□□ -0.37
NEDD8-MDP1-203ENST00000604306 FGF18O76093 207 aa12.73□□□□□ -0.37
NEDD8-MDP1-203ENST00000604306 SEC31AO94979 1220 aaKnown RBP12.73□□□□□ -0.37
NEDD8-MDP1-203ENST00000604306 KRT14P02533 472 aa12.73□□□□□ -0.37
NEDD8-MDP1-203ENST00000604306 RPL21P46778 160 aaKnown RBP12.73□□□□□ -0.37
NEDD8-MDP1-203ENST00000604306 KCNJ1P48048 391 aa12.73□□□□□ -0.37
NEDD8-MDP1-203ENST00000604306 EIF3EP60228 445 aaKnown RBP12.73□□□□□ -0.37
NEDD8-MDP1-203ENST00000604306 PITX1P78337 314 aaPredicted RBP12.73□□□□□ -0.37
NEDD8-MDP1-203ENST00000604306 DUSP4Q13115 394 aa12.73□□□□□ -0.37
NEDD8-MDP1-203ENST00000604306 CBLBQ13191 982 aa12.73□□□□□ -0.37
NEDD8-MDP1-203ENST00000604306 NME3Q13232 169 aa12.73□□□□□ -0.37
NEDD8-MDP1-203ENST00000604306 SNX1Q13596 522 aa12.73□□□□□ -0.37
NEDD8-MDP1-203ENST00000604306 SLMAPQ14BN4 828 aa12.73□□□□□ -0.37
NEDD8-MDP1-203ENST00000604306 CA9Q16790 459 aa12.73□□□□□ -0.37
NEDD8-MDP1-203ENST00000604306 DDR2Q16832 855 aa12.73□□□□□ -0.37
NEDD8-MDP1-203ENST00000604306 PPP6R3Q5H9R7 873 aaPredicted RBP12.73□□□□□ -0.37
NEDD8-MDP1-203ENST00000604306 ALS2CLQ60I27 953 aa12.73□□□□□ -0.37
NEDD8-MDP1-203ENST00000604306 RFX8Q6ZV50 586 aa12.73□□□□□ -0.37
NEDD8-MDP1-203ENST00000604306 RELL1Q8IUW5 271 aa12.73□□□□□ -0.37
NEDD8-MDP1-203ENST00000604306 HERC6Q8IVU3 1022 aa12.73□□□□□ -0.37
NEDD8-MDP1-203ENST00000604306 CDKL3Q8IVW4 592 aaPredicted RBP12.73□□□□□ -0.37
NEDD8-MDP1-203ENST00000604306 VPS52Q8N1B4 723 aa12.73□□□□□ -0.37
NEDD8-MDP1-203ENST00000604306 FBXO32Q969P5 355 aa12.73□□□□□ -0.37
NEDD8-MDP1-203ENST00000604306 SLC39A13Q96H72 371 aa12.73□□□□□ -0.37
NEDD8-MDP1-203ENST00000604306 C1orf74Q96LT6 269 aa12.73□□□□□ -0.37
NEDD8-MDP1-203ENST00000604306 SEPT5Q99719 369 aaPredicted RBP12.73□□□□□ -0.37
NEDD8-MDP1-203ENST00000604306 FERMT1Q9BQL6 677 aa12.73□□□□□ -0.37
NEDD8-MDP1-203ENST00000604306 ARHGEF4Q9NR80 690 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms