RNA–Protein interactions for RNA: ENST00000602905.1

PPFIA3-213, Transcript of PTPRF interacting protein alpha 3, humanhuman

TSL 2

Gene PPFIA3, Length 799 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA3-213ENST00000602905 OR8K1Q8NGG5 319 aa16.68■□□□□ 0.26
PPFIA3-213ENST00000602905 ADAM32Q8TC27 787 aa16.68■□□□□ 0.26
PPFIA3-213ENST00000602905 RNF34Q969K3 372 aa16.68■□□□□ 0.26
PPFIA3-213ENST00000602905 DDX50Q9BQ39 737 aaKnown RBP16.68■□□□□ 0.26
PPFIA3-213ENST00000602905 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP16.68■□□□□ 0.26
PPFIA3-213ENST00000602905 SELENOOQ9BVL4 669 aa16.68■□□□□ 0.26
PPFIA3-213ENST00000602905 AGO1Q9UL18 857 aaKnown RBP16.68■□□□□ 0.26
PPFIA3-213ENST00000602905 ANKRD62A6NC57 917 aa16.67■□□□□ 0.26
PPFIA3-213ENST00000602905 OTOL1A6NHN0 477 aaPredicted RBP16.67■□□□□ 0.26
PPFIA3-213ENST00000602905 GREM1O60565 184 aa16.67■□□□□ 0.26
PPFIA3-213ENST00000602905 SLC2A3P11169 496 aa16.67■□□□□ 0.26
PPFIA3-213ENST00000602905 GZMAP12544 262 aa16.67■□□□□ 0.26
PPFIA3-213ENST00000602905 AVPR2P30518 371 aa16.67■□□□□ 0.26
PPFIA3-213ENST00000602905 MAGEA9P43362 315 aa16.67■□□□□ 0.26
PPFIA3-213ENST00000602905 PON2Q15165 354 aa16.67■□□□□ 0.26
PPFIA3-213ENST00000602905 E4F1Q66K89 784 aaPredicted RBP16.67■□□□□ 0.26
PPFIA3-213ENST00000602905 RHBDF2Q6PJF5 856 aa16.67■□□□□ 0.26
PPFIA3-213ENST00000602905 TPGS1Q6ZTW0 290 aa16.67■□□□□ 0.26
PPFIA3-213ENST00000602905 SND1Q7KZF4 910 aaKnown RBP eCLIP16.67■□□□□ 0.26
PPFIA3-213ENST00000602905 CD101Q93033 1021 aa16.67■□□□□ 0.26
PPFIA3-213ENST00000602905 VCPIP1Q96JH7 1222 aa16.67■□□□□ 0.26
PPFIA3-213ENST00000602905 XPO6Q96QU8 1125 aaKnown RBP16.67■□□□□ 0.26
PPFIA3-213ENST00000602905 P2RY13Q9BPV8 354 aa16.67■□□□□ 0.26
PPFIA3-213ENST00000602905 METTL5Q9NRN9 209 aaKnown RBP16.67■□□□□ 0.26
PPFIA3-213ENST00000602905 DDIT4Q9NX09 232 aa16.67■□□□□ 0.26
PPFIA3-213ENST00000602905 PAXBP1Q9Y5B6 917 aa16.67■□□□□ 0.26
PPFIA3-213ENST00000602905 SYNJ2BP-COX16A0A087WUM0 186 aa16.66■□□□□ 0.26
PPFIA3-213ENST00000602905 TMCO5BA8MYB1 307 aa16.66■□□□□ 0.26
PPFIA3-213ENST00000602905 PALM2-AKAP2B1ALY0 433 aaPredicted RBP16.66■□□□□ 0.26
PPFIA3-213ENST00000602905 M0QYT0 321 aa16.66■□□□□ 0.26
PPFIA3-213ENST00000602905 TRDMT1O14717 391 aaKnown RBP16.66■□□□□ 0.26
PPFIA3-213ENST00000602905 IRAK2O43187 625 aa16.66■□□□□ 0.26
PPFIA3-213ENST00000602905 F9P00740 461 aa16.66■□□□□ 0.26
PPFIA3-213ENST00000602905 IGLV3-27P01718 113 aa16.66■□□□□ 0.26
PPFIA3-213ENST00000602905 KLKB1P03952 638 aa16.66■□□□□ 0.26
PPFIA3-213ENST00000602905 KRT3P12035 628 aa16.66■□□□□ 0.26
PPFIA3-213ENST00000602905 DESP17661 470 aa16.66■□□□□ 0.26
PPFIA3-213ENST00000602905 TARSP26639 723 aaKnown RBP16.66■□□□□ 0.26
PPFIA3-213ENST00000602905 SULT1E1P49888 294 aa16.66■□□□□ 0.26
PPFIA3-213ENST00000602905 GSCP56915 257 aaPredicted RBP16.66■□□□□ 0.26
PPFIA3-213ENST00000602905 MTA1Q13330 715 aa16.66■□□□□ 0.26
PPFIA3-213ENST00000602905 DGKKQ5KSL6 1271 aa16.66■□□□□ 0.26
PPFIA3-213ENST00000602905 TXNDC11Q6PKC3 985 aa16.66■□□□□ 0.26
PPFIA3-213ENST00000602905 NUDT18Q6ZVK8 323 aa16.66■□□□□ 0.26
PPFIA3-213ENST00000602905 ARCQ7LC44 396 aa16.66■□□□□ 0.26
PPFIA3-213ENST00000602905 TMEM25Q86YD3 366 aa16.66■□□□□ 0.26
PPFIA3-213ENST00000602905 CNGA4Q8IV77 575 aa16.66■□□□□ 0.26
PPFIA3-213ENST00000602905 DRC7Q8IY82 874 aa16.66■□□□□ 0.26
PPFIA3-213ENST00000602905 CPXM2Q8N436 756 aa16.66■□□□□ 0.26
PPFIA3-213ENST00000602905 ATP6V0D2Q8N8Y2 350 aa16.66■□□□□ 0.26
PPFIA3-213ENST00000602905 AZIN2Q96A70 460 aa16.66■□□□□ 0.26
PPFIA3-213ENST00000602905 TRIM11Q96F44 468 aa16.66■□□□□ 0.26
PPFIA3-213ENST00000602905 SYT11Q9BT88 431 aa16.66■□□□□ 0.26
PPFIA3-213ENST00000602905 BBS2Q9BXC9 721 aa16.66■□□□□ 0.26
PPFIA3-213ENST00000602905 SLTMQ9NWH9 1034 aaKnown RBP eCLIP16.66■□□□□ 0.26
PPFIA3-213ENST00000602905 COX16Q9P0S2 106 aa16.66■□□□□ 0.26
PPFIA3-213ENST00000602905 ATG2BQ96BY7 2078 aa16.66■□□□□ 0.26
PPFIA3-213ENST00000602905 TYW5A2RUC4 315 aaKnown RBP16.65■□□□□ 0.26
PPFIA3-213ENST00000602905 AKR1B15C9JRZ8 316 aaPredicted RBP16.65■□□□□ 0.26
PPFIA3-213ENST00000602905 NEDD8-MDP1E9PL57 170 aa16.65■□□□□ 0.26
PPFIA3-213ENST00000602905 HOXC11O43248 304 aaPredicted RBP16.65■□□□□ 0.26
PPFIA3-213ENST00000602905 ACSL4O60488 711 aa16.65■□□□□ 0.26
PPFIA3-213ENST00000602905 RTN2O75298 545 aa16.65■□□□□ 0.26
PPFIA3-213ENST00000602905 DCNP07585 359 aaKnown RBP16.65■□□□□ 0.26
PPFIA3-213ENST00000602905 ABCB4P21439 1286 aa16.65■□□□□ 0.26
PPFIA3-213ENST00000602905 DRD1P21728 446 aa16.65■□□□□ 0.26
PPFIA3-213ENST00000602905 CCR1P32246 355 aa16.65■□□□□ 0.26
PPFIA3-213ENST00000602905 EIF2DP41214 584 aaKnown RBP16.65■□□□□ 0.26
PPFIA3-213ENST00000602905 GALK1P51570 392 aa16.65■□□□□ 0.26
PPFIA3-213ENST00000602905 DEUP1Q05D60 604 aa16.65■□□□□ 0.26
PPFIA3-213ENST00000602905 NME3Q13232 169 aa16.65■□□□□ 0.26
PPFIA3-213ENST00000602905 ADGRF1Q5T601 910 aa16.65■□□□□ 0.26
PPFIA3-213ENST00000602905 DNAJC24Q6P3W2 148 aa16.65■□□□□ 0.26
PPFIA3-213ENST00000602905 MON1BQ7L1V2 547 aa16.65■□□□□ 0.26
PPFIA3-213ENST00000602905 PHLDB2Q86SQ0 1253 aa16.65■□□□□ 0.26
PPFIA3-213ENST00000602905 CCDC105Q8IYK2 499 aa16.65■□□□□ 0.26
PPFIA3-213ENST00000602905 MCOLN2Q8IZK6 566 aa16.65■□□□□ 0.26
PPFIA3-213ENST00000602905 C3orf20Q8ND61 904 aa16.65■□□□□ 0.26
PPFIA3-213ENST00000602905 CCDC26Q8TAB7 109 aa16.65■□□□□ 0.26
PPFIA3-213ENST00000602905 MRFAP1L1Q96HT8 127 aa16.65■□□□□ 0.26
PPFIA3-213ENST00000602905 FCRL2Q96LA5 508 aaPredicted RBP16.65■□□□□ 0.26
PPFIA3-213ENST00000602905 DEF6Q9H4E7 631 aa16.65■□□□□ 0.26
PPFIA3-213ENST00000602905 LMAN1LQ9HAT1 526 aa16.65■□□□□ 0.26
PPFIA3-213ENST00000602905 MARK1Q9P0L2 795 aa16.65■□□□□ 0.26
PPFIA3-213ENST00000602905 MTF2Q9Y483 593 aaPredicted RBP16.65■□□□□ 0.26
PPFIA3-213ENST00000602905 COL4A3Q01955 1670 aa16.65■□□□□ 0.26
PPFIA3-213ENST00000602905 KMT2EQ8IZD2 1858 aa16.65■□□□□ 0.26
PPFIA3-213ENST00000602905 DDX3XO00571 662 aaKnown RBP eCLIP16.64■□□□□ 0.25
PPFIA3-213ENST00000602905 PI15O43692 258 aa16.64■□□□□ 0.25
PPFIA3-213ENST00000602905 MOCS2O96007 188 aaPredicted RBP16.64■□□□□ 0.25
PPFIA3-213ENST00000602905 IGLV3-25P01717 112 aa16.64■□□□□ 0.25
PPFIA3-213ENST00000602905 FTLP02792 175 aaPredicted RBP16.64■□□□□ 0.25
PPFIA3-213ENST00000602905 APODP05090 189 aa16.64■□□□□ 0.25
PPFIA3-213ENST00000602905 TYRP14679 529 aa16.64■□□□□ 0.25
PPFIA3-213ENST00000602905 SDC4P31431 198 aa16.64■□□□□ 0.25
PPFIA3-213ENST00000602905 HNRNPH3P31942 346 aaKnown RBP16.64■□□□□ 0.25
PPFIA3-213ENST00000602905 ZNF75DP51815 510 aa16.64■□□□□ 0.25
PPFIA3-213ENST00000602905 NUBP1P53384 320 aa16.64■□□□□ 0.25
PPFIA3-213ENST00000602905 VCPP55072 806 aaKnown RBP16.64■□□□□ 0.25
PPFIA3-213ENST00000602905 PTP4A2Q12974 167 aa16.64■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms