RNA–Protein interactions for RNA: ENST00000602723.5

CSMD1-217, Transcript of CUB and Sushi multiple domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CSMD1, Length 10,938 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-217ENST00000602723 DYRK3O43781 588 aa9.85□□□□□ -0.83
CSMD1-217ENST00000602723 CPSF4O95639 269 aaKnown RBP9.85□□□□□ -0.83
CSMD1-217ENST00000602723 FASTKQ14296 549 aaKnown RBP9.85□□□□□ -0.83
CSMD1-217ENST00000602723 TMPRSS6Q8IU80 811 aa9.85□□□□□ -0.83
CSMD1-217ENST00000602723 PHACTR4Q8IZ21 702 aa9.85□□□□□ -0.83
CSMD1-217ENST00000602723 SEPT1Q8WYJ6 367 aa9.85□□□□□ -0.83
CSMD1-217ENST00000602723 APOPT1Q96IL0 206 aa9.85□□□□□ -0.83
CSMD1-217ENST00000602723 ADGRE3Q9BY15 652 aa9.85□□□□□ -0.83
CSMD1-217ENST00000602723 ANKEF1Q9NU02 776 aa9.85□□□□□ -0.83
CSMD1-217ENST00000602723 ATF5Q9Y2D1 282 aaPredicted RBP9.85□□□□□ -0.83
CSMD1-217ENST00000602723 CCDC154A6NI56 674 aa9.85□□□□□ -0.83
CSMD1-217ENST00000602723 MYL12BO14950 172 aa9.85□□□□□ -0.83
CSMD1-217ENST00000602723 PRLRP16471 622 aa9.85□□□□□ -0.83
CSMD1-217ENST00000602723 TKFCQ3LXA3 575 aa9.85□□□□□ -0.83
CSMD1-217ENST00000602723 ACTR8Q9H981 624 aa9.85□□□□□ -0.83
CSMD1-217ENST00000602723 TPRKBQ9Y3C4 175 aa9.85□□□□□ -0.83
CSMD1-217ENST00000602723 GLP2RO95838 553 aa9.85□□□□□ -0.83
CSMD1-217ENST00000602723 ANXA6P08133 673 aa9.85□□□□□ -0.83
CSMD1-217ENST00000602723 ITGALP20701 1170 aa9.85□□□□□ -0.83
CSMD1-217ENST00000602723 PBLDP30039 288 aaPredicted RBP9.85□□□□□ -0.83
CSMD1-217ENST00000602723 XRCC4Q13426 336 aa9.85□□□□□ -0.83
CSMD1-217ENST00000602723 DCTN2Q13561 401 aaKnown RBP9.85□□□□□ -0.83
CSMD1-217ENST00000602723 NDUFAF6Q330K2 333 aa9.85□□□□□ -0.83
CSMD1-217ENST00000602723 SLC47A2Q86VL8 602 aa9.85□□□□□ -0.83
CSMD1-217ENST00000602723 RAET1EQ8TD07 263 aa9.85□□□□□ -0.83
CSMD1-217ENST00000602723 PHACTR1Q9C0D0 580 aa9.85□□□□□ -0.83
CSMD1-217ENST00000602723 KCNH7Q9NS40 1196 aa9.85□□□□□ -0.83
CSMD1-217ENST00000602723 VTI1BQ9UEU0 232 aa9.85□□□□□ -0.83
CSMD1-217ENST00000602723 OVOS2A0A0G2JMS6 1433 aa9.84□□□□□ -0.83
CSMD1-217ENST00000602723 OVOS2A0A0J9YW53 1432 aa9.84□□□□□ -0.83
CSMD1-217ENST00000602723 OVOS2Q6IE36 1432 aa9.84□□□□□ -0.83
CSMD1-217ENST00000602723 SGPL1O95470 568 aa9.84□□□□□ -0.83
CSMD1-217ENST00000602723 HPCAL1P37235 193 aa9.84□□□□□ -0.83
CSMD1-217ENST00000602723 GSTA3Q16772 222 aa9.84□□□□□ -0.83
CSMD1-217ENST00000602723 XRRA1Q6P2D8 792 aa9.84□□□□□ -0.83
CSMD1-217ENST00000602723 CLVS1Q8IUQ0 354 aaPredicted RBP9.84□□□□□ -0.83
CSMD1-217ENST00000602723 DENND6AQ8IWF6 608 aa9.84□□□□□ -0.83
CSMD1-217ENST00000602723 MOSPD2Q8NHP6 518 aa9.84□□□□□ -0.83
CSMD1-217ENST00000602723 POLR1BQ9H9Y6 1135 aa9.84□□□□□ -0.83
CSMD1-217ENST00000602723 C17orf75Q9HAS0 396 aa9.84□□□□□ -0.83
CSMD1-217ENST00000602723 GPAMQ9HCL2 828 aa9.84□□□□□ -0.83
CSMD1-217ENST00000602723 NT5MQ9NPB1 228 aa9.84□□□□□ -0.83
CSMD1-217ENST00000602723 PTENP60484 403 aa9.84□□□□□ -0.83
CSMD1-217ENST00000602723 EXOC3L1Q86VI1 746 aa9.84□□□□□ -0.83
CSMD1-217ENST00000602723 FAM172AQ8WUF8 416 aa9.84□□□□□ -0.83
CSMD1-217ENST00000602723 ATXN2LQ8WWM7 1075 aaKnown RBP9.84□□□□□ -0.83
CSMD1-217ENST00000602723 MKL2Q9ULH7 1088 aa9.84□□□□□ -0.83
CSMD1-217ENST00000602723 A0A0A6YYK5 440 aaPredicted RBP9.84□□□□□ -0.83
CSMD1-217ENST00000602723 PRR23AA6NEV1 266 aa9.84□□□□□ -0.83
CSMD1-217ENST00000602723 FCHO1O14526 889 aa9.84□□□□□ -0.83
CSMD1-217ENST00000602723 MPOP05164 745 aa9.84□□□□□ -0.83
CSMD1-217ENST00000602723 GLI1P08151 1106 aa9.84□□□□□ -0.83
CSMD1-217ENST00000602723 ABCB1P08183 1280 aaPredicted RBP9.84□□□□□ -0.83
CSMD1-217ENST00000602723 C6orf222P0C671 652 aaPredicted RBP9.84□□□□□ -0.83
CSMD1-217ENST00000602723 LBPP18428 481 aa9.84□□□□□ -0.83
CSMD1-217ENST00000602723 PRKAA1Q13131 559 aa9.84□□□□□ -0.83
CSMD1-217ENST00000602723 PAPD7Q5XG87 772 aaKnown RBP9.84□□□□□ -0.83
CSMD1-217ENST00000602723 PMF1Q6P1K2 205 aa9.84□□□□□ -0.83
CSMD1-217ENST00000602723 RIBC2Q9H4K1 309 aa9.84□□□□□ -0.83
CSMD1-217ENST00000602723 PCDHB7Q9Y5E2 793 aa9.84□□□□□ -0.83
CSMD1-217ENST00000602723 DNAJC13O75165 2243 aa9.84□□□□□ -0.83
CSMD1-217ENST00000602723 PTGES3LE9PB15 166 aa9.84□□□□□ -0.83
CSMD1-217ENST00000602723 H3BN98 237 aa9.84□□□□□ -0.83
CSMD1-217ENST00000602723 VPS4BO75351 444 aa9.84□□□□□ -0.83
CSMD1-217ENST00000602723 MTRF1O75570 445 aaKnown RBP9.84□□□□□ -0.83
CSMD1-217ENST00000602723 CYP2C8P10632 490 aa9.84□□□□□ -0.83
CSMD1-217ENST00000602723 MGAT5Q09328 741 aa9.84□□□□□ -0.83
CSMD1-217ENST00000602723 SAMD4BQ5PRF9 694 aaKnown RBP9.84□□□□□ -0.83
CSMD1-217ENST00000602723 COMMD2Q86X83 199 aa9.84□□□□□ -0.83
CSMD1-217ENST00000602723 FBXO25Q8TCJ0 367 aa9.84□□□□□ -0.83
CSMD1-217ENST00000602723 MYLK2Q9H1R3 596 aa9.84□□□□□ -0.83
CSMD1-217ENST00000602723 PRR12Q9ULL5 1215 aa9.84□□□□□ -0.83
CSMD1-217ENST00000602723 CHKBQ9Y259 395 aa9.84□□□□□ -0.83
CSMD1-217ENST00000602723 TULP4Q9NRJ4 1543 aa9.84□□□□□ -0.83
CSMD1-217ENST00000602723 ASS1P00966 412 aaKnown RBP9.84□□□□□ -0.83
CSMD1-217ENST00000602723 SERPINE1P05121 402 aa9.84□□□□□ -0.83
CSMD1-217ENST00000602723 BCAT1P54687 386 aa9.84□□□□□ -0.83
CSMD1-217ENST00000602723 MPP3Q13368 585 aa9.84□□□□□ -0.83
CSMD1-217ENST00000602723 FICDQ9BVA6 458 aa9.84□□□□□ -0.83
CSMD1-217ENST00000602723 ATP6V1HQ9UI12 483 aa9.84□□□□□ -0.83
CSMD1-217ENST00000602723 STARD13Q9Y3M8 1113 aa9.84□□□□□ -0.83
CSMD1-217ENST00000602723 TBC1D12O60347 775 aa9.84□□□□□ -0.83
CSMD1-217ENST00000602723 RPS6KA5O75582 802 aa9.84□□□□□ -0.83
CSMD1-217ENST00000602723 MACC1Q6ZN28 852 aa9.84□□□□□ -0.83
CSMD1-217ENST00000602723 CROCCP3Q8IVE0 287 aa9.84□□□□□ -0.83
CSMD1-217ENST00000602723 SLC20A1Q8WUM9 679 aa9.84□□□□□ -0.83
CSMD1-217ENST00000602723 L3MBTL3Q96JM7 780 aaPredicted RBP9.84□□□□□ -0.83
CSMD1-217ENST00000602723 RIT2Q99578 217 aa9.84□□□□□ -0.83
CSMD1-217ENST00000602723 LNPEPQ9UIQ6 1025 aa9.84□□□□□ -0.83
CSMD1-217ENST00000602723 EFCAB10A6NFE3 127 aa9.84□□□□□ -0.83
CSMD1-217ENST00000602723 FGFR3P22607 806 aa9.84□□□□□ -0.83
CSMD1-217ENST00000602723 DSG3P32926 999 aa9.84□□□□□ -0.83
CSMD1-217ENST00000602723 TAF6P49848 677 aa9.84□□□□□ -0.83
CSMD1-217ENST00000602723 TRAF3Q13114 568 aa9.84□□□□□ -0.83
CSMD1-217ENST00000602723 NACC2Q96BF6 587 aa9.84□□□□□ -0.83
CSMD1-217ENST00000602723 CCDC3Q9BQI4 270 aa9.84□□□□□ -0.83
CSMD1-217ENST00000602723 PLA2G12BQ9BX93 195 aa9.84□□□□□ -0.83
CSMD1-217ENST00000602723 H7C0S8 307 aa9.84□□□□□ -0.83
CSMD1-217ENST00000602723 CYP2C9P11712 490 aa9.84□□□□□ -0.83
CSMD1-217ENST00000602723 ORC1Q13415 861 aa9.84□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms