RNA–Protein interactions for RNA: ENST00000602011.5

SHKBP1-227, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 897 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-227ENST00000602011 STON1Q9Y6Q2 735 aa18.7■□□□□ 0.58
SHKBP1-227ENST00000602011 A0A1W2PQ27 194 aa18.69■□□□□ 0.58
SHKBP1-227ENST00000602011 A0A1W2PQ64 194 aa18.69■□□□□ 0.58
SHKBP1-227ENST00000602011 FAM221BA6H8Z2 402 aa18.69■□□□□ 0.58
SHKBP1-227ENST00000602011 CETN3O15182 167 aa18.69■□□□□ 0.58
SHKBP1-227ENST00000602011 SYNCRIPO60506 623 aaKnown RBP18.69■□□□□ 0.58
SHKBP1-227ENST00000602011 CD58P19256 250 aa18.69■□□□□ 0.58
SHKBP1-227ENST00000602011 FAM193AP78312 1265 aa18.69■□□□□ 0.58
SHKBP1-227ENST00000602011 SIM1P81133 766 aaPredicted RBP18.69■□□□□ 0.58
SHKBP1-227ENST00000602011 PDE4CQ08493 712 aa18.69■□□□□ 0.58
SHKBP1-227ENST00000602011 RAB41Q5JT25 222 aa18.69■□□□□ 0.58
SHKBP1-227ENST00000602011 TOGARAM2Q6ZUX3 1019 aa18.69■□□□□ 0.58
SHKBP1-227ENST00000602011 RGL4Q8IZJ4 473 aa18.69■□□□□ 0.58
SHKBP1-227ENST00000602011 MINDY1Q8N5J2 469 aa18.69■□□□□ 0.58
SHKBP1-227ENST00000602011 DNASE2BQ8WZ79 361 aa18.69■□□□□ 0.58
SHKBP1-227ENST00000602011 JAKMIP2Q96AA8 810 aa18.69■□□□□ 0.58
SHKBP1-227ENST00000602011 HSPA12BQ96MM6 686 aa18.69■□□□□ 0.58
SHKBP1-227ENST00000602011 GTPBP4Q9BZE4 634 aaKnown RBP18.69■□□□□ 0.58
SHKBP1-227ENST00000602011 IRX2Q9BZI1 471 aaPredicted RBP18.69■□□□□ 0.58
SHKBP1-227ENST00000602011 PRDM16Q9HAZ2 1276 aa18.69■□□□□ 0.58
SHKBP1-227ENST00000602011 RAB20Q9NX57 234 aa18.69■□□□□ 0.58
SHKBP1-227ENST00000602011 CACNA2D2Q9NY47 1150 aa18.69■□□□□ 0.58
SHKBP1-227ENST00000602011 KIAA1257Q9ULG3 409 aa18.69■□□□□ 0.58
SHKBP1-227ENST00000602011 DMXL2Q8TDJ6 3036 aa18.69■□□□□ 0.58
SHKBP1-227ENST00000602011 KLKB1P03952 638 aa18.68■□□□□ 0.58
SHKBP1-227ENST00000602011 TRIM49P0CI25 452 aa18.68■□□□□ 0.58
SHKBP1-227ENST00000602011 TRIM49CP0CI26 452 aa18.68■□□□□ 0.58
SHKBP1-227ENST00000602011 MFAP3P55082 362 aa18.68■□□□□ 0.58
SHKBP1-227ENST00000602011 YWHAEP62258 255 aaKnown RBP18.68■□□□□ 0.58
SHKBP1-227ENST00000602011 PLEKHG6Q3KR16 790 aa18.68■□□□□ 0.58
SHKBP1-227ENST00000602011 FYB2Q5VWT5 728 aa18.68■□□□□ 0.58
SHKBP1-227ENST00000602011 PM20D1Q6GTS8 502 aa18.68■□□□□ 0.58
SHKBP1-227ENST00000602011 RSRC2Q7L4I2 434 aaKnown RBP18.68■□□□□ 0.58
SHKBP1-227ENST00000602011 SLC41A1Q8IVJ1 513 aa18.68■□□□□ 0.58
SHKBP1-227ENST00000602011 PLD4Q96BZ4 506 aa18.68■□□□□ 0.58
SHKBP1-227ENST00000602011 PCED1AQ9H1Q7 454 aa18.68■□□□□ 0.58
SHKBP1-227ENST00000602011 CISHQ9NSE2 258 aa18.68■□□□□ 0.58
SHKBP1-227ENST00000602011 ELOVL2Q9NXB9 296 aa18.68■□□□□ 0.58
SHKBP1-227ENST00000602011 WSB2Q9NYS7 404 aaPredicted RBP18.68■□□□□ 0.58
SHKBP1-227ENST00000602011 MARCH2Q9P0N8 246 aa18.68■□□□□ 0.58
SHKBP1-227ENST00000602011 NUDT5Q9UKK9 219 aa18.68■□□□□ 0.58
SHKBP1-227ENST00000602011 DSPP15924 2871 aaKnown RBP18.67■□□□□ 0.58
SHKBP1-227ENST00000602011 A0A1B0GTW7 788 aa18.67■□□□□ 0.58
SHKBP1-227ENST00000602011 EPB41P11171 864 aaKnown RBP18.67■□□□□ 0.58
SHKBP1-227ENST00000602011 CORO1AP31146 461 aaKnown RBP18.67■□□□□ 0.58
SHKBP1-227ENST00000602011 MXI1P50539 228 aa18.67■□□□□ 0.58
SHKBP1-227ENST00000602011 NDUFA8P51970 172 aa18.67■□□□□ 0.58
SHKBP1-227ENST00000602011 EFEMP1Q12805 493 aa18.67■□□□□ 0.58
SHKBP1-227ENST00000602011 PKP1Q13835 747 aa18.67■□□□□ 0.58
SHKBP1-227ENST00000602011 IL27RAQ6UWB1 636 aa18.67■□□□□ 0.58
SHKBP1-227ENST00000602011 KIAA1324Q6UXG2 1013 aaKnown RBP18.67■□□□□ 0.58
SHKBP1-227ENST00000602011 KRBA2Q6ZNG9 492 aa18.67■□□□□ 0.58
SHKBP1-227ENST00000602011 ANKS1BQ7Z6G8 1248 aa18.67■□□□□ 0.58
SHKBP1-227ENST00000602011 NUP58Q9BVL2 599 aa18.67■□□□□ 0.58
SHKBP1-227ENST00000602011 RMND1Q9NWS8 449 aa18.67■□□□□ 0.58
SHKBP1-227ENST00000602011 USP36Q9P275 1121 aaKnown RBP18.67■□□□□ 0.58
SHKBP1-227ENST00000602011 RASAL2Q9UJF2 1139 aa18.67■□□□□ 0.58
SHKBP1-227ENST00000602011 AGO1Q9UL18 857 aaKnown RBP18.67■□□□□ 0.58
SHKBP1-227ENST00000602011 PCDHB9Q9Y5E1 797 aa18.67■□□□□ 0.58
SHKBP1-227ENST00000602011 MDM4O15151 490 aa18.66■□□□□ 0.58
SHKBP1-227ENST00000602011 LATS1O95835 1130 aa18.66■□□□□ 0.58
SHKBP1-227ENST00000602011 ZBED1O96006 694 aa18.66■□□□□ 0.58
SHKBP1-227ENST00000602011 IGLV3-19P01714 112 aa18.66■□□□□ 0.58
SHKBP1-227ENST00000602011 HARS2P49590 506 aaKnown RBP18.66■□□□□ 0.58
SHKBP1-227ENST00000602011 YWHAGP61981 247 aaKnown RBP eCLIP18.66■□□□□ 0.58
SHKBP1-227ENST00000602011 RING1Q06587 406 aa18.66■□□□□ 0.58
SHKBP1-227ENST00000602011 FUT11Q495W5 492 aa18.66■□□□□ 0.58
SHKBP1-227ENST00000602011 ZCWPW2Q504Y3 356 aa18.66■□□□□ 0.58
SHKBP1-227ENST00000602011 MPPE1Q53F39 396 aa18.66■□□□□ 0.58
SHKBP1-227ENST00000602011 ZNF394Q53GI3 561 aa18.66■□□□□ 0.58
SHKBP1-227ENST00000602011 PIGZQ86VD9 579 aa18.66■□□□□ 0.58
SHKBP1-227ENST00000602011 TMPRSS6Q8IU80 811 aa18.66■□□□□ 0.58
SHKBP1-227ENST00000602011 FAM217AQ8IXS0 508 aa18.66■□□□□ 0.58
SHKBP1-227ENST00000602011 CHCHD4Q8N4Q1 142 aa18.66■□□□□ 0.58
SHKBP1-227ENST00000602011 ZNF557Q8N988 423 aaPredicted RBP18.66■□□□□ 0.58
SHKBP1-227ENST00000602011 SLC4A11Q8NBS3 891 aa18.66■□□□□ 0.58
SHKBP1-227ENST00000602011 PRCCQ92733 491 aaPredicted RBP18.66■□□□□ 0.58
SHKBP1-227ENST00000602011 SIPA1Q96FS4 1042 aa18.66■□□□□ 0.58
SHKBP1-227ENST00000602011 PIWIL1Q96J94 861 aaKnown RBP18.66■□□□□ 0.58
SHKBP1-227ENST00000602011 PLK2Q9NYY3 685 aa18.66■□□□□ 0.58
SHKBP1-227ENST00000602011 MAPK8IP1Q9UQF2 711 aa18.66■□□□□ 0.58
SHKBP1-227ENST00000602011 HBS1LQ9Y450 684 aaKnown RBP18.66■□□□□ 0.58
SHKBP1-227ENST00000602011 RAD54BQ9Y620 910 aa18.66■□□□□ 0.58
SHKBP1-227ENST00000602011 CEP192Q8TEP8 1941 aa18.65■□□□□ 0.58
SHKBP1-227ENST00000602011 MYH10P35580 1976 aa18.65■□□□□ 0.58
SHKBP1-227ENST00000602011 WASH3PC4AMC7 463 aa18.65■□□□□ 0.58
SHKBP1-227ENST00000602011 ZNF883P0CG24 379 aa18.65■□□□□ 0.58
SHKBP1-227ENST00000602011 C7P10643 843 aa18.65■□□□□ 0.58
SHKBP1-227ENST00000602011 ACADMP11310 421 aa18.65■□□□□ 0.58
SHKBP1-227ENST00000602011 CD59P13987 128 aa18.65■□□□□ 0.58
SHKBP1-227ENST00000602011 RAD23BP54727 409 aa18.65■□□□□ 0.58
SHKBP1-227ENST00000602011 ARID5AQ03989 594 aa18.65■□□□□ 0.58
SHKBP1-227ENST00000602011 TRIP4Q15650 581 aaPredicted RBP18.65■□□□□ 0.58
SHKBP1-227ENST00000602011 DENND1CQ8IV53 801 aa18.65■□□□□ 0.58
SHKBP1-227ENST00000602011 DDI1Q8WTU0 396 aa18.65■□□□□ 0.58
SHKBP1-227ENST00000602011 BHMTQ93088 406 aa18.65■□□□□ 0.58
SHKBP1-227ENST00000602011 TOE1Q96GM8 510 aaKnown RBP18.65■□□□□ 0.58
SHKBP1-227ENST00000602011 MMRN2Q9H8L6 949 aa18.65■□□□□ 0.58
SHKBP1-227ENST00000602011 FBRSQ9HAH7 460 aa18.65■□□□□ 0.58
SHKBP1-227ENST00000602011 LRRC4Q9HBW1 653 aa18.65■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms