RNA–Protein interactions for RNA: ENST00000601981.5

UPF1-213, Transcript of UPF1, RNA helicase and ATPase, humanhuman

TSL 5

Gene UPF1, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF1-213ENST00000601981 MRPL47Q9HD33 250 aaKnown RBP10.51□□□□□ -0.73
UPF1-213ENST00000601981 MTPAPQ9NVV4 582 aaKnown RBP eCLIP10.51□□□□□ -0.73
UPF1-213ENST00000601981 TMEM51Q9NW97 253 aa10.51□□□□□ -0.73
UPF1-213ENST00000601981 CYTH4Q9UIA0 394 aa10.51□□□□□ -0.73
UPF1-213ENST00000601981 DNMT3LQ9UJW3 386 aa10.51□□□□□ -0.73
UPF1-213ENST00000601981 ARHGAP26Q9UNA1 814 aa10.51□□□□□ -0.73
UPF1-213ENST00000601981 PACSIN2Q9UNF0 486 aaPredicted RBP10.51□□□□□ -0.73
UPF1-213ENST00000601981 C19orf67A6NJJ6 358 aa10.5□□□□□ -0.73
UPF1-213ENST00000601981 YJEFN3A6XGL0 299 aa10.5□□□□□ -0.73
UPF1-213ENST00000601981 E7ENQ6 273 aa10.5□□□□□ -0.73
UPF1-213ENST00000601981 ANHXE9PGG2 379 aa10.5□□□□□ -0.73
UPF1-213ENST00000601981 DDX3YO15523 660 aaKnown RBP10.5□□□□□ -0.73
UPF1-213ENST00000601981 PAPSS1O43252 624 aaPredicted RBP10.5□□□□□ -0.73
UPF1-213ENST00000601981 COCHO43405 550 aa10.5□□□□□ -0.73
UPF1-213ENST00000601981 OLFM2O95897 454 aa10.5□□□□□ -0.73
UPF1-213ENST00000601981 ERBB2P04626 1255 aa10.5□□□□□ -0.73
UPF1-213ENST00000601981 TUBBP07437 444 aa10.5□□□□□ -0.73
UPF1-213ENST00000601981 NCAM1P13591 858 aa10.5□□□□□ -0.73
UPF1-213ENST00000601981 CTNNA2P26232 953 aa10.5□□□□□ -0.73
UPF1-213ENST00000601981 CXCR5P32302 372 aa10.5□□□□□ -0.73
UPF1-213ENST00000601981 KPNA1P52294 538 aaPredicted RBP10.5□□□□□ -0.73
UPF1-213ENST00000601981 GSCP56915 257 aaPredicted RBP10.5□□□□□ -0.73
UPF1-213ENST00000601981 YWHAZP63104 245 aaKnown RBP10.5□□□□□ -0.73
UPF1-213ENST00000601981 SLC7A9P82251 487 aa10.5□□□□□ -0.73
UPF1-213ENST00000601981 COG7P83436 770 aa10.5□□□□□ -0.73
UPF1-213ENST00000601981 SLC6A3Q01959 620 aa10.5□□□□□ -0.73
UPF1-213ENST00000601981 HTR4Q13639 388 aa10.5□□□□□ -0.73
UPF1-213ENST00000601981 FAM102AQ5T9C2 384 aaPredicted RBP10.5□□□□□ -0.73
UPF1-213ENST00000601981 MMS22LQ6ZRQ5 1243 aa10.5□□□□□ -0.73
UPF1-213ENST00000601981 FAM183BPQ6ZVS7 135 aa10.5□□□□□ -0.73
UPF1-213ENST00000601981 SLC26A9Q7LBE3 791 aa10.5□□□□□ -0.73
UPF1-213ENST00000601981 SCD5Q86SK9 330 aa10.5□□□□□ -0.73
UPF1-213ENST00000601981 RASGEF1CQ8N431 466 aa10.5□□□□□ -0.73
UPF1-213ENST00000601981 MMGT1Q8N4V1 131 aa10.5□□□□□ -0.73
UPF1-213ENST00000601981 UBL4BQ8N7F7 174 aa10.5□□□□□ -0.73
UPF1-213ENST00000601981 KIAA1958Q8N8K9 716 aa10.5□□□□□ -0.73
UPF1-213ENST00000601981 NOA1Q8NC60 698 aaKnown RBP10.5□□□□□ -0.73
UPF1-213ENST00000601981 SPATA4Q8NEY3 305 aa10.5□□□□□ -0.73
UPF1-213ENST00000601981 ACTRT1Q8TDG2 376 aa10.5□□□□□ -0.73
UPF1-213ENST00000601981 BPIFB1Q8TDL5 484 aa10.5□□□□□ -0.73
UPF1-213ENST00000601981 CD101Q93033 1021 aa10.5□□□□□ -0.73
UPF1-213ENST00000601981 ZSWIM3Q96MP5 696 aa10.5□□□□□ -0.73
UPF1-213ENST00000601981 CARD9Q9H257 536 aa10.5□□□□□ -0.73
UPF1-213ENST00000601981 CCSER2Q9H7U1 834 aa10.5□□□□□ -0.73
UPF1-213ENST00000601981 NMUR1Q9HB89 426 aa10.5□□□□□ -0.73
UPF1-213ENST00000601981 PARVAQ9NVD7 372 aa10.5□□□□□ -0.73
UPF1-213ENST00000601981 RRN3Q9NYV6 651 aa10.5□□□□□ -0.73
UPF1-213ENST00000601981 LIMD1Q9UGP4 676 aa10.5□□□□□ -0.73
UPF1-213ENST00000601981 RASAL2Q9UJF2 1139 aa10.5□□□□□ -0.73
UPF1-213ENST00000601981 ANAPC7Q9UJX3 599 aa10.5□□□□□ -0.73
UPF1-213ENST00000601981 LSM7Q9UK45 103 aaKnown RBP10.5□□□□□ -0.73
UPF1-213ENST00000601981 TTC7AQ9ULT0 858 aaPredicted RBP10.5□□□□□ -0.73
UPF1-213ENST00000601981 STAP1Q9ULZ2 295 aa10.5□□□□□ -0.73
UPF1-213ENST00000601981 SH3BP1Q9Y3L3 701 aa10.5□□□□□ -0.73
UPF1-213ENST00000601981 CPQQ9Y646 472 aa10.5□□□□□ -0.73
UPF1-213ENST00000601981 ALG6Q9Y672 507 aa10.5□□□□□ -0.73
UPF1-213ENST00000601981 NUMBLQ9Y6R0 609 aa10.5□□□□□ -0.73
UPF1-213ENST00000601981 KIF26AQ9ULI4 1882 aaPredicted RBP10.5□□□□□ -0.73
UPF1-213ENST00000601981 FAM170AA1A519 330 aa10.49□□□□□ -0.73
UPF1-213ENST00000601981 TARSL2A2RTX5 802 aaKnown RBP10.49□□□□□ -0.73
UPF1-213ENST00000601981 CCDC66A2RUB6 948 aa10.49□□□□□ -0.73
UPF1-213ENST00000601981 HEPACAM2A8MVW5 462 aa10.49□□□□□ -0.73
UPF1-213ENST00000601981 GOLGA8SH3BPF8 625 aa10.49□□□□□ -0.73
UPF1-213ENST00000601981 PGRMC1O00264 195 aaKnown RBP10.49□□□□□ -0.73
UPF1-213ENST00000601981 SLC9A3R1O14745 358 aaPredicted RBP10.49□□□□□ -0.73
UPF1-213ENST00000601981 DAB1O75553 588 aa10.49□□□□□ -0.73
UPF1-213ENST00000601981 TCF3P15923 654 aa10.49□□□□□ -0.73
UPF1-213ENST00000601981 H2AFXP16104 143 aaPredicted RBP10.49□□□□□ -0.73
UPF1-213ENST00000601981 PSMC3P17980 439 aa10.49□□□□□ -0.73
UPF1-213ENST00000601981 COMTP21964 271 aa10.49□□□□□ -0.73
UPF1-213ENST00000601981 GBP1P32455 592 aa10.49□□□□□ -0.73
UPF1-213ENST00000601981 MAN1A1P33908 653 aa10.49□□□□□ -0.73
UPF1-213ENST00000601981 CTNNA1P35221 906 aaKnown RBP10.49□□□□□ -0.73
UPF1-213ENST00000601981 SLC1A1P43005 524 aa10.49□□□□□ -0.73
UPF1-213ENST00000601981 DNA2P51530 1060 aa10.49□□□□□ -0.73
UPF1-213ENST00000601981 EFEMP1Q12805 493 aa10.49□□□□□ -0.73
UPF1-213ENST00000601981 MAMLD1Q13495 774 aa10.49□□□□□ -0.73
UPF1-213ENST00000601981 MESDQ14696 234 aa10.49□□□□□ -0.73
UPF1-213ENST00000601981 CCDC70Q6NSX1 233 aa10.49□□□□□ -0.73
UPF1-213ENST00000601981 DNAJC24Q6P3W2 148 aa10.49□□□□□ -0.73
UPF1-213ENST00000601981 PARM1Q6UWI2 310 aa10.49□□□□□ -0.73
UPF1-213ENST00000601981 OLFML1Q6UWY5 402 aa10.49□□□□□ -0.73
UPF1-213ENST00000601981 XYLT1Q86Y38 959 aa10.49□□□□□ -0.73
UPF1-213ENST00000601981 MIB1Q86YT6 1006 aa10.49□□□□□ -0.73
UPF1-213ENST00000601981 MFSD6LQ8IWD5 586 aa10.49□□□□□ -0.73
UPF1-213ENST00000601981 C3orf20Q8ND61 904 aa10.49□□□□□ -0.73
UPF1-213ENST00000601981 TTC16Q8NEE8 873 aa10.49□□□□□ -0.73
UPF1-213ENST00000601981 SH3RF2Q8TEC5 729 aa10.49□□□□□ -0.73
UPF1-213ENST00000601981 CLEC4CQ8WTT0 213 aa10.49□□□□□ -0.73
UPF1-213ENST00000601981 EDEM1Q92611 657 aa10.49□□□□□ -0.73
UPF1-213ENST00000601981 RUBCNQ92622 972 aa10.49□□□□□ -0.73
UPF1-213ENST00000601981 FGF14Q92915 247 aa10.49□□□□□ -0.73
UPF1-213ENST00000601981 USP13Q92995 863 aaPredicted RBP10.49□□□□□ -0.73
UPF1-213ENST00000601981 SERPINB11Q96P15 392 aa10.49□□□□□ -0.73
UPF1-213ENST00000601981 CYP2S1Q96SQ9 504 aa10.49□□□□□ -0.73
UPF1-213ENST00000601981 KXD1Q9BQD3 176 aa10.49□□□□□ -0.73
UPF1-213ENST00000601981 TRMT61BQ9BVS5 477 aaKnown RBP10.49□□□□□ -0.73
UPF1-213ENST00000601981 ANKZF1Q9H8Y5 726 aa10.49□□□□□ -0.73
UPF1-213ENST00000601981 KCNK12Q9HB15 430 aa10.49□□□□□ -0.73
UPF1-213ENST00000601981 ARGLU1Q9NWB6 273 aaPredicted RBP10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms