RNA–Protein interactions for RNA: ENST00000601319.1

HERC3-214, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 3, humanhuman

TSL 2

Gene HERC3, Length 1,298 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC3-214ENST00000601319 TRMT11Q7Z4G4 463 aaKnown RBP17.93■□□□□ 0.46
HERC3-214ENST00000601319 SLC47A2Q86VL8 602 aa17.93■□□□□ 0.46
HERC3-214ENST00000601319 WDTC1Q8N5D0 677 aa17.93■□□□□ 0.46
HERC3-214ENST00000601319 ANKRD20A12PQ8NF67 263 aa17.93■□□□□ 0.46
HERC3-214ENST00000601319 SERPINB11Q96P15 392 aa17.93■□□□□ 0.46
HERC3-214ENST00000601319 NOX5Q96PH1 765 aa17.93■□□□□ 0.46
HERC3-214ENST00000601319 HHIPQ96QV1 700 aa17.93■□□□□ 0.46
HERC3-214ENST00000601319 VPS16Q9H269 839 aa17.93■□□□□ 0.46
HERC3-214ENST00000601319 GANQ9H2C0 597 aa17.93■□□□□ 0.46
HERC3-214ENST00000601319 SLC27A6Q9Y2P4 619 aa17.93■□□□□ 0.46
HERC3-214ENST00000601319 PTPRZ1P23471 2315 aaPredicted RBP17.93■□□□□ 0.46
HERC3-214ENST00000601319 TBC1D3BA6NDS4 549 aa17.92■□□□□ 0.46
HERC3-214ENST00000601319 F8VZ95 297 aa17.92■□□□□ 0.46
HERC3-214ENST00000601319 HRO43593 1189 aa17.92■□□□□ 0.46
HERC3-214ENST00000601319 CYBBP04839 570 aa17.92■□□□□ 0.46
HERC3-214ENST00000601319 PNMA6AP0CW24 399 aaPredicted RBP17.92■□□□□ 0.46
HERC3-214ENST00000601319 NCAM1P13591 858 aa17.92■□□□□ 0.46
HERC3-214ENST00000601319 HOXC13P31276 330 aa17.92■□□□□ 0.46
HERC3-214ENST00000601319 DGKGP49619 791 aa17.92■□□□□ 0.46
HERC3-214ENST00000601319 DGKEP52429 567 aa17.92■□□□□ 0.46
HERC3-214ENST00000601319 NCAPHQ15003 741 aa17.92■□□□□ 0.46
HERC3-214ENST00000601319 CRY1Q16526 586 aa17.92■□□□□ 0.46
HERC3-214ENST00000601319 EOGTQ5NDL2 527 aa17.92■□□□□ 0.46
HERC3-214ENST00000601319 LAIR1Q6GTX8 287 aa17.92■□□□□ 0.46
HERC3-214ENST00000601319 RASSF3Q86WH2 238 aa17.92■□□□□ 0.46
HERC3-214ENST00000601319 UNC45BQ8IWX7 931 aa17.92■□□□□ 0.46
HERC3-214ENST00000601319 ALLCQ8N6M5 410 aa17.92■□□□□ 0.46
HERC3-214ENST00000601319 DQX1Q8TE96 717 aaKnown RBP17.92■□□□□ 0.46
HERC3-214ENST00000601319 GAB3Q8WWW8 586 aa17.92■□□□□ 0.46
HERC3-214ENST00000601319 AZIN2Q96A70 460 aa17.92■□□□□ 0.46
HERC3-214ENST00000601319 FAM149B1Q96BN6 582 aa17.92■□□□□ 0.46
HERC3-214ENST00000601319 P2RY11Q96G91 374 aa17.92■□□□□ 0.46
HERC3-214ENST00000601319 CPXM1Q96SM3 734 aa17.92■□□□□ 0.46
HERC3-214ENST00000601319 BPIFA3Q9BQP9 254 aa17.92■□□□□ 0.46
HERC3-214ENST00000601319 STK33Q9BYT3 514 aa17.92■□□□□ 0.46
HERC3-214ENST00000601319 NAT10Q9H0A0 1025 aaKnown RBP17.92■□□□□ 0.46
HERC3-214ENST00000601319 ASNSD1Q9NWL6 643 aa17.92■□□□□ 0.46
HERC3-214ENST00000601319 CEP83Q9Y592 693 aa17.92■□□□□ 0.46
HERC3-214ENST00000601319 TNRC6BQ9UPQ9 1833 aaKnown RBP17.91■□□□□ 0.46
HERC3-214ENST00000601319 ANTXRLA6NF34 631 aa17.91■□□□□ 0.46
HERC3-214ENST00000601319 LGALS16A8MUM7 142 aa17.91■□□□□ 0.46
HERC3-214ENST00000601319 TRIM24O15164 1050 aa17.91■□□□□ 0.46
HERC3-214ENST00000601319 KLF8O95600 359 aaPredicted RBP17.91■□□□□ 0.46
HERC3-214ENST00000601319 GLI1P08151 1106 aa17.91■□□□□ 0.46
HERC3-214ENST00000601319 CISD3P0C7P0 127 aa17.91■□□□□ 0.46
HERC3-214ENST00000601319 CDH5P33151 784 aaPredicted RBP17.91■□□□□ 0.46
HERC3-214ENST00000601319 KRT9P35527 623 aa17.91■□□□□ 0.46
HERC3-214ENST00000601319 COPB1P53618 953 aaKnown RBP17.91■□□□□ 0.46
HERC3-214ENST00000601319 SNX16P57768 344 aa17.91■□□□□ 0.46
HERC3-214ENST00000601319 YWHAZP63104 245 aaKnown RBP17.91■□□□□ 0.46
HERC3-214ENST00000601319 ADGRF1Q5T601 910 aa17.91■□□□□ 0.46
HERC3-214ENST00000601319 CCDC33Q8N5R6 958 aa17.91■□□□□ 0.46
HERC3-214ENST00000601319 ZNF513Q8N8E2 541 aaPredicted RBP17.91■□□□□ 0.46
HERC3-214ENST00000601319 TXNDC5Q8NBS9 432 aaKnown RBP17.91■□□□□ 0.46
HERC3-214ENST00000601319 TSTD1Q8NFU3 115 aa17.91■□□□□ 0.46
HERC3-214ENST00000601319 PPP1R13BQ96KQ4 1090 aa17.91■□□□□ 0.46
HERC3-214ENST00000601319 SLC2A11Q9BYW1 496 aa17.91■□□□□ 0.46
HERC3-214ENST00000601319 HSD3B7Q9H2F3 369 aa17.91■□□□□ 0.46
HERC3-214ENST00000601319 POPDC2Q9HBU9 364 aa17.91■□□□□ 0.46
HERC3-214ENST00000601319 POLR3BQ9NW08 1133 aaPredicted RBP17.91■□□□□ 0.46
HERC3-214ENST00000601319 NCDNQ9UBB6 729 aa17.91■□□□□ 0.46
HERC3-214ENST00000601319 RAB23Q9ULC3 237 aa17.91■□□□□ 0.46
HERC3-214ENST00000601319 TLR6Q9Y2C9 796 aa17.91■□□□□ 0.46
HERC3-214ENST00000601319 SIK3Q9Y2K2 1263 aa17.91■□□□□ 0.46
HERC3-214ENST00000601319 NYNRINQ9P2P1 1898 aaKnown RBP17.9■□□□□ 0.46
HERC3-214ENST00000601319 LRRC10BA6NIK2 292 aa17.9■□□□□ 0.46
HERC3-214ENST00000601319 SGK1O00141 431 aa17.9■□□□□ 0.46
HERC3-214ENST00000601319 AXIN1O15169 862 aa17.9■□□□□ 0.46
HERC3-214ENST00000601319 IRAK2O43187 625 aa17.9■□□□□ 0.46
HERC3-214ENST00000601319 ADAM23O75077 832 aa17.9■□□□□ 0.46
HERC3-214ENST00000601319 RPP40O75818 363 aaKnown RBP17.9■□□□□ 0.46
HERC3-214ENST00000601319 IGLV3-25P01717 112 aa17.9■□□□□ 0.46
HERC3-214ENST00000601319 CYP11B1P15538 503 aa17.9■□□□□ 0.46
HERC3-214ENST00000601319 TIE1P35590 1138 aa17.9■□□□□ 0.46
HERC3-214ENST00000601319 PXNP49023 591 aaPredicted RBP17.9■□□□□ 0.46
HERC3-214ENST00000601319 TBX4P57082 545 aa17.9■□□□□ 0.46
HERC3-214ENST00000601319 SIM2Q14190 667 aaPredicted RBP17.9■□□□□ 0.46
HERC3-214ENST00000601319 MPPE1Q53F39 396 aa17.9■□□□□ 0.46
HERC3-214ENST00000601319 RNF43Q68DV7 783 aa17.9■□□□□ 0.46
HERC3-214ENST00000601319 CAVIN1Q6NZI2 390 aaKnown RBP17.9■□□□□ 0.46
HERC3-214ENST00000601319 TOGARAM2Q6ZUX3 1019 aa17.9■□□□□ 0.46
HERC3-214ENST00000601319 PASD1Q8IV76 773 aa17.9■□□□□ 0.46
HERC3-214ENST00000601319 C1orf131Q8NDD1 294 aaKnown RBP17.9■□□□□ 0.46
HERC3-214ENST00000601319 BHMTQ93088 406 aa17.9■□□□□ 0.46
HERC3-214ENST00000601319 SLC39A13Q96H72 371 aa17.9■□□□□ 0.46
HERC3-214ENST00000601319 PLK2Q9NYY3 685 aa17.9■□□□□ 0.46
HERC3-214ENST00000601319 HCN2Q9UL51 889 aa17.9■□□□□ 0.46
HERC3-214ENST00000601319 NAALADL1Q9UQQ1 740 aa17.9■□□□□ 0.46
HERC3-214ENST00000601319 PRRT4C9JH25 899 aa17.89■□□□□ 0.45
HERC3-214ENST00000601319 HSF2BPO75031 334 aa17.89■□□□□ 0.45
HERC3-214ENST00000601319 LSM8O95777 96 aaKnown RBP17.89■□□□□ 0.45
HERC3-214ENST00000601319 HOXD9P28356 352 aaPredicted RBP17.89■□□□□ 0.45
HERC3-214ENST00000601319 SLC11A2P49281 568 aa17.89■□□□□ 0.45
HERC3-214ENST00000601319 JAM2P57087 298 aa17.89■□□□□ 0.45
HERC3-214ENST00000601319 SRSF5Q13243 272 aaKnown RBP17.89■□□□□ 0.45
HERC3-214ENST00000601319 ANO6Q4KMQ2 910 aa17.89■□□□□ 0.45
HERC3-214ENST00000601319 EFHC1Q5JVL4 640 aa17.89■□□□□ 0.45
HERC3-214ENST00000601319 MPP7Q5T2T1 576 aa17.89■□□□□ 0.45
HERC3-214ENST00000601319 EMC10Q5UCC4 262 aa17.89■□□□□ 0.45
HERC3-214ENST00000601319 OLFML1Q6UWY5 402 aa17.89■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms