RNA–Protein interactions for RNA: ENST00000601220.5

CHMP2A-208, Transcript of charged multivesicular body protein 2A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP2A, Length 885 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-208ENST00000601220 ADAM33Q9BZ11 813 aa18.86■□□□□ 0.61
CHMP2A-208ENST00000601220 DNAI2Q9GZS0 605 aa18.86■□□□□ 0.61
CHMP2A-208ENST00000601220 MARCH2Q9P0N8 246 aa18.86■□□□□ 0.61
CHMP2A-208ENST00000601220 USP36Q9P275 1121 aaKnown RBP18.86■□□□□ 0.61
CHMP2A-208ENST00000601220 PCDH15Q96QU1 1955 aa18.86■□□□□ 0.61
CHMP2A-208ENST00000601220 NPC1O15118 1278 aa18.85■□□□□ 0.61
CHMP2A-208ENST00000601220 CETN3O15182 167 aa18.85■□□□□ 0.61
CHMP2A-208ENST00000601220 GJB3O75712 270 aa18.85■□□□□ 0.61
CHMP2A-208ENST00000601220 PRCPP42785 496 aa18.85■□□□□ 0.61
CHMP2A-208ENST00000601220 TKTL1P51854 596 aa18.85■□□□□ 0.61
CHMP2A-208ENST00000601220 TRIP4Q15650 581 aaPredicted RBP18.85■□□□□ 0.61
CHMP2A-208ENST00000601220 COBLL1Q53SF7 1204 aa18.85■□□□□ 0.61
CHMP2A-208ENST00000601220 TMEM215Q68D42 235 aa18.85■□□□□ 0.61
CHMP2A-208ENST00000601220 RABEPKQ7Z6M1 372 aa18.85■□□□□ 0.61
CHMP2A-208ENST00000601220 UBR7Q8N806 425 aa18.85■□□□□ 0.61
CHMP2A-208ENST00000601220 GTPBP2Q9BX10 602 aaKnown RBP18.85■□□□□ 0.61
CHMP2A-208ENST00000601220 SLC32A1Q9H598 525 aa18.85■□□□□ 0.61
CHMP2A-208ENST00000601220 GDPD2Q9HCC8 539 aa18.85■□□□□ 0.61
CHMP2A-208ENST00000601220 ITM2CQ9NQX7 267 aa18.85■□□□□ 0.61
CHMP2A-208ENST00000601220 DNAAF2Q9NVR5 837 aaKnown RBP18.85■□□□□ 0.61
CHMP2A-208ENST00000601220 ELOVL2Q9NXB9 296 aa18.85■□□□□ 0.61
CHMP2A-208ENST00000601220 WSB2Q9NYS7 404 aaPredicted RBP18.85■□□□□ 0.61
CHMP2A-208ENST00000601220 SPAARA0A1B0GVQ0 90 aa18.84■□□□□ 0.61
CHMP2A-208ENST00000601220 SLC12A8A0AV02 714 aa18.84■□□□□ 0.61
CHMP2A-208ENST00000601220 KCNJ18B7U540 433 aa18.84■□□□□ 0.61
CHMP2A-208ENST00000601220 STX10O60499 249 aa18.84■□□□□ 0.61
CHMP2A-208ENST00000601220 ZBED1O96006 694 aa18.84■□□□□ 0.61
CHMP2A-208ENST00000601220 EPB41P11171 864 aaKnown RBP18.84■□□□□ 0.61
CHMP2A-208ENST00000601220 CD6P30203 668 aa18.84■□□□□ 0.61
CHMP2A-208ENST00000601220 ZNF132P52740 706 aa18.84■□□□□ 0.61
CHMP2A-208ENST00000601220 PMS1P54277 932 aaKnown RBP18.84■□□□□ 0.61
CHMP2A-208ENST00000601220 FAM193AP78312 1265 aa18.84■□□□□ 0.61
CHMP2A-208ENST00000601220 PDE4CQ08493 712 aa18.84■□□□□ 0.61
CHMP2A-208ENST00000601220 PNOCQ13519 176 aa18.84■□□□□ 0.61
CHMP2A-208ENST00000601220 FMR1NBQ8N0W7 255 aaPredicted RBP18.84■□□□□ 0.61
CHMP2A-208ENST00000601220 MINDY1Q8N5J2 469 aa18.84■□□□□ 0.61
CHMP2A-208ENST00000601220 DNASE2BQ8WZ79 361 aa18.84■□□□□ 0.61
CHMP2A-208ENST00000601220 ULBP1Q9BZM6 244 aa18.84■□□□□ 0.61
CHMP2A-208ENST00000601220 PRDM16Q9HAZ2 1276 aa18.84■□□□□ 0.61
CHMP2A-208ENST00000601220 ZMIZ1Q9ULJ6 1067 aa18.84■□□□□ 0.61
CHMP2A-208ENST00000601220 XPO1O14980 1071 aaKnown RBP18.83■□□□□ 0.6
CHMP2A-208ENST00000601220 OPHN1O60890 802 aa18.83■□□□□ 0.6
CHMP2A-208ENST00000601220 GABBR2O75899 941 aa18.83■□□□□ 0.6
CHMP2A-208ENST00000601220 C7P10643 843 aa18.83■□□□□ 0.6
CHMP2A-208ENST00000601220 MAOBP27338 520 aa18.83■□□□□ 0.6
CHMP2A-208ENST00000601220 COPAP53621 1224 aa18.83■□□□□ 0.6
CHMP2A-208ENST00000601220 CUL2Q13617 745 aa18.83■□□□□ 0.6
CHMP2A-208ENST00000601220 GOLGA7BQ2TAP0 167 aa18.83■□□□□ 0.6
CHMP2A-208ENST00000601220 PKDCCQ504Y2 493 aa18.83■□□□□ 0.6
CHMP2A-208ENST00000601220 ANKRD40Q6AI12 368 aa18.83■□□□□ 0.6
CHMP2A-208ENST00000601220 KIAA1324Q6UXG2 1013 aaKnown RBP18.83■□□□□ 0.6
CHMP2A-208ENST00000601220 SPATA20Q8TB22 786 aa18.83■□□□□ 0.6
CHMP2A-208ENST00000601220 FOXJ1Q92949 421 aa18.83■□□□□ 0.6
CHMP2A-208ENST00000601220 PLD4Q96BZ4 506 aa18.83■□□□□ 0.6
CHMP2A-208ENST00000601220 TOE1Q96GM8 510 aaKnown RBP18.83■□□□□ 0.6
CHMP2A-208ENST00000601220 SLC2A11Q9BYW1 496 aa18.83■□□□□ 0.6
CHMP2A-208ENST00000601220 STOML2Q9UJZ1 356 aa18.83■□□□□ 0.6
CHMP2A-208ENST00000601220 TSPAN16Q9UKR8 245 aa18.83■□□□□ 0.6
CHMP2A-208ENST00000601220 STRIP2Q9ULQ0 834 aa18.83■□□□□ 0.6
CHMP2A-208ENST00000601220 ATP6V1DQ9Y5K8 247 aa18.83■□□□□ 0.6
CHMP2A-208ENST00000601220 MYH10P35580 1976 aa18.82■□□□□ 0.6
CHMP2A-208ENST00000601220 CACNA1EQ15878 2313 aa18.82■□□□□ 0.6
CHMP2A-208ENST00000601220 SLC16A3O15427 465 aaKnown RBP18.82■□□□□ 0.6
CHMP2A-208ENST00000601220 HYAL3O43820 417 aaPredicted RBP18.82■□□□□ 0.6
CHMP2A-208ENST00000601220 NDUFS2O75306 463 aa18.82■□□□□ 0.6
CHMP2A-208ENST00000601220 IGLV3-19P01714 112 aa18.82■□□□□ 0.6
CHMP2A-208ENST00000601220 ATXN3P54252 364 aaPredicted RBP18.82■□□□□ 0.6
CHMP2A-208ENST00000601220 SIM1P81133 766 aaPredicted RBP18.82■□□□□ 0.6
CHMP2A-208ENST00000601220 ZNF234Q14588 700 aa18.82■□□□□ 0.6
CHMP2A-208ENST00000601220 STARD3Q14849 445 aa18.82■□□□□ 0.6
CHMP2A-208ENST00000601220 RSRC2Q7L4I2 434 aaKnown RBP18.82■□□□□ 0.6
CHMP2A-208ENST00000601220 ANKS1BQ7Z6G8 1248 aa18.82■□□□□ 0.6
CHMP2A-208ENST00000601220 TMPRSS6Q8IU80 811 aa18.82■□□□□ 0.6
CHMP2A-208ENST00000601220 FMNL3Q8IVF7 1028 aa18.82■□□□□ 0.6
CHMP2A-208ENST00000601220 HDDC3Q8N4P3 179 aa18.82■□□□□ 0.6
CHMP2A-208ENST00000601220 ENGASEQ8NFI3 743 aa18.82■□□□□ 0.6
CHMP2A-208ENST00000601220 SORCS1Q8WY21 1168 aa18.82■□□□□ 0.6
CHMP2A-208ENST00000601220 SLC35C1Q96A29 364 aa18.82■□□□□ 0.6
CHMP2A-208ENST00000601220 NFE2L3Q9Y4A8 694 aa18.82■□□□□ 0.6
CHMP2A-208ENST00000601220 WDFY3Q8IZQ1 3526 aa18.81■□□□□ 0.6
CHMP2A-208ENST00000601220 FAM221BA6H8Z2 402 aa18.81■□□□□ 0.6
CHMP2A-208ENST00000601220 PCNX2A6NKB5 2137 aa18.81■□□□□ 0.6
CHMP2A-208ENST00000601220 YJEFN3A6XGL0 299 aa18.81■□□□□ 0.6
CHMP2A-208ENST00000601220 E7ENQ6 273 aa18.81■□□□□ 0.6
CHMP2A-208ENST00000601220 SYPP08247 313 aa18.81■□□□□ 0.6
CHMP2A-208ENST00000601220 NCAM1P13591 858 aa18.81■□□□□ 0.6
CHMP2A-208ENST00000601220 PRKCHP24723 683 aa18.81■□□□□ 0.6
CHMP2A-208ENST00000601220 HOXD9P28356 352 aaPredicted RBP18.81■□□□□ 0.6
CHMP2A-208ENST00000601220 PI4KAP42356 2102 aa18.81■□□□□ 0.6
CHMP2A-208ENST00000601220 TPMTP51580 245 aa18.81■□□□□ 0.6
CHMP2A-208ENST00000601220 BCAT1P54687 386 aa18.81■□□□□ 0.6
CHMP2A-208ENST00000601220 FKBP3Q00688 224 aaKnown RBP18.81■□□□□ 0.6
CHMP2A-208ENST00000601220 EIF4HQ15056 248 aaKnown RBP18.81■□□□□ 0.6
CHMP2A-208ENST00000601220 SGO2Q562F6 1265 aa18.81■□□□□ 0.6
CHMP2A-208ENST00000601220 WDR45BQ5MNZ6 344 aa18.81■□□□□ 0.6
CHMP2A-208ENST00000601220 SYCP2LQ5T4T6 812 aa18.81■□□□□ 0.6
CHMP2A-208ENST00000601220 ZNF658Q5TYW1 1059 aaPredicted RBP18.81■□□□□ 0.6
CHMP2A-208ENST00000601220 BSPRYQ5W0U4 402 aa18.81■□□□□ 0.6
CHMP2A-208ENST00000601220 RGL4Q8IZJ4 473 aa18.81■□□□□ 0.6
CHMP2A-208ENST00000601220 SCML4Q8N228 414 aa18.81■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms