RNA–Protein interactions for RNA: ENST00000600910.5

PNKP-215, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5 BASIC

Gene PNKP, Length 1,600 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-215ENST00000600910 GKN1Q9NS71 199 aa21.29■■□□□ 1
PNKP-215ENST00000600910 HBS1LQ9Y450 684 aaKnown RBP21.29■■□□□ 1
PNKP-215ENST00000600910 DENND4AQ7Z401 1863 aa21.28■■□□□ 1
PNKP-215ENST00000600910 MBTPS2O43462 519 aa21.28■■□□□ 1
PNKP-215ENST00000600910 TCF4P15884 667 aa21.28■■□□□ 1
PNKP-215ENST00000600910 MIPP30301 263 aa21.28■■□□□ 1
PNKP-215ENST00000600910 PCK1P35558 622 aa21.28■■□□□ 1
PNKP-215ENST00000600910 SLC1A1P43005 524 aa21.28■■□□□ 1
PNKP-215ENST00000600910 CXCR3P49682 368 aa21.28■■□□□ 1
PNKP-215ENST00000600910 KPNA1P52294 538 aaPredicted RBP21.28■■□□□ 1
PNKP-215ENST00000600910 COG7P83436 770 aa21.28■■□□□ 1
PNKP-215ENST00000600910 ZXDBP98169 803 aa21.28■■□□□ 1
PNKP-215ENST00000600910 SMAD4Q13485 552 aaKnown RBP21.28■■□□□ 1
PNKP-215ENST00000600910 SLFN11Q7Z7L1 901 aa21.28■■□□□ 1
PNKP-215ENST00000600910 SYCE1Q8N0S2 351 aa21.28■■□□□ 1
PNKP-215ENST00000600910 TRIM58Q8NG06 486 aa21.28■■□□□ 1
PNKP-215ENST00000600910 ZSCAN18Q8TBC5 510 aaPredicted RBP21.28■■□□□ 1
PNKP-215ENST00000600910 RNF34Q969K3 372 aa21.28■■□□□ 1
PNKP-215ENST00000600910 CDH7Q9ULB5 785 aa21.28■■□□□ 1
PNKP-215ENST00000600910 SPOPO43791 374 aa21.27■■□□□ 1
PNKP-215ENST00000600910 KIF5CO60282 957 aa21.27■■□□□ 1
PNKP-215ENST00000600910 SSR1P43307 286 aaKnown RBP21.27■■□□□ 1
PNKP-215ENST00000600910 ZC3H12AQ5D1E8 599 aaKnown RBP21.27■■□□□ 1
PNKP-215ENST00000600910 SLC39A13Q96H72 371 aa21.27■■□□□ 1
PNKP-215ENST00000600910 FCRL2Q96LA5 508 aaPredicted RBP21.27■■□□□ 1
PNKP-215ENST00000600910 NCAPGQ9BPX3 1015 aa21.27■■□□□ 1
PNKP-215ENST00000600910 GDE1Q9NZC3 331 aa21.27■■□□□ 1
PNKP-215ENST00000600910 PCSK1NQ9UHG2 260 aa21.27■■□□□ 1
PNKP-215ENST00000600910 USP18Q9UMW8 372 aa21.27■■□□□ 1
PNKP-215ENST00000600910 ARHGAP26Q9UNA1 814 aa21.27■■□□□ 1
PNKP-215ENST00000600910 PRAMEF12O95522 483 aa21.26■□□□□ 0.99
PNKP-215ENST00000600910 FTCDO95954 541 aa21.26■□□□□ 0.99
PNKP-215ENST00000600910 IGLV3-27P01718 113 aa21.26■□□□□ 0.99
PNKP-215ENST00000600910 IRF1P10914 325 aa21.26■□□□□ 0.99
PNKP-215ENST00000600910 CCR1P32246 355 aa21.26■□□□□ 0.99
PNKP-215ENST00000600910 KCNQ1P51787 676 aa21.26■□□□□ 0.99
PNKP-215ENST00000600910 TAS2R40P59535 323 aa21.26■□□□□ 0.99
PNKP-215ENST00000600910 RING1Q06587 406 aa21.26■□□□□ 0.99
PNKP-215ENST00000600910 ZNF569Q5MCW4 686 aa21.26■□□□□ 0.99
PNKP-215ENST00000600910 ARID3BQ8IVW6 561 aaPredicted RBP21.26■□□□□ 0.99
PNKP-215ENST00000600910 USP13Q92995 863 aaPredicted RBP21.26■□□□□ 0.99
PNKP-215ENST00000600910 MYADMQ96S97 322 aa21.26■□□□□ 0.99
PNKP-215ENST00000600910 WDCPQ9H6R7 721 aa21.26■□□□□ 0.99
PNKP-215ENST00000600910 TDP1Q9NUW8 608 aa21.26■□□□□ 0.99
PNKP-215ENST00000600910 SLTMQ9NWH9 1034 aaKnown RBP eCLIP21.26■□□□□ 0.99
PNKP-215ENST00000600910 CCL26Q9Y258 94 aa21.26■□□□□ 0.99
PNKP-215ENST00000600910 PRPSAP2O60256 369 aa21.26■□□□□ 0.99
PNKP-215ENST00000600910 STC2O76061 302 aa21.26■□□□□ 0.99
PNKP-215ENST00000600910 GBP2P32456 591 aaPredicted RBP21.26■□□□□ 0.99
PNKP-215ENST00000600910 SLC25A11Q02978 314 aaKnown RBP21.26■□□□□ 0.99
PNKP-215ENST00000600910 PPP2R5DQ14738 602 aa21.26■□□□□ 0.99
PNKP-215ENST00000600910 PEX26Q7Z412 305 aa21.26■□□□□ 0.99
PNKP-215ENST00000600910 NT5DC3Q86UY8 548 aa21.26■□□□□ 0.99
PNKP-215ENST00000600910 CCDC185Q8N715 623 aa21.26■□□□□ 0.99
PNKP-215ENST00000600910 TTC16Q8NEE8 873 aa21.26■□□□□ 0.99
PNKP-215ENST00000600910 ADAMTS19Q8TE59 1207 aa21.26■□□□□ 0.99
PNKP-215ENST00000600910 PLD4Q96BZ4 506 aa21.26■□□□□ 0.99
PNKP-215ENST00000600910 PEBP4Q96S96 227 aa21.26■□□□□ 0.99
PNKP-215ENST00000600910 TKTL2Q9H0I9 626 aa21.26■□□□□ 0.99
PNKP-215ENST00000600910 TMEM51Q9NW97 253 aa21.26■□□□□ 0.99
PNKP-215ENST00000600910 HELZP42694 1942 aaKnown RBP21.25■□□□□ 0.99
PNKP-215ENST00000600910 MSNP26038 577 aaKnown RBP21.25■□□□□ 0.99
PNKP-215ENST00000600910 IL1R2P27930 398 aa21.25■□□□□ 0.99
PNKP-215ENST00000600910 WEE1P30291 646 aa21.25■□□□□ 0.99
PNKP-215ENST00000600910 HADHQ16836 314 aaKnown RBP21.25■□□□□ 0.99
PNKP-215ENST00000600910 LEXMQ3ZCV2 418 aa21.25■□□□□ 0.99
PNKP-215ENST00000600910 FAM78AQ5JUQ0 283 aa21.25■□□□□ 0.99
PNKP-215ENST00000600910 BRMS1LQ5PSV4 323 aa21.25■□□□□ 0.99
PNKP-215ENST00000600910 WBP2Q969T9 261 aa21.25■□□□□ 0.99
PNKP-215ENST00000600910 ASB16Q96NS5 453 aa21.25■□□□□ 0.99
PNKP-215ENST00000600910 ANLNQ9NQW6 1124 aa21.25■□□□□ 0.99
PNKP-215ENST00000600910 TMPRSS4Q9NRS4 437 aa21.25■□□□□ 0.99
PNKP-215ENST00000600910 NUP210Q8TEM1 1887 aaPredicted RBP21.25■□□□□ 0.99
PNKP-215ENST00000600910 LEFTY2O00292 366 aa21.24■□□□□ 0.99
PNKP-215ENST00000600910 MOCS2O96007 188 aaPredicted RBP21.24■□□□□ 0.99
PNKP-215ENST00000600910 APOEP02649 317 aa21.24■□□□□ 0.99
PNKP-215ENST00000600910 SLC2A3P11169 496 aa21.24■□□□□ 0.99
PNKP-215ENST00000600910 TNNT1P13805 278 aa21.24■□□□□ 0.99
PNKP-215ENST00000600910 NUGGCQ68CJ6 796 aa21.24■□□□□ 0.99
PNKP-215ENST00000600910 TXNRD3NBQ6F5E7 133 aa21.24■□□□□ 0.99
PNKP-215ENST00000600910 CYP4V2Q6ZWL3 525 aaPredicted RBP21.24■□□□□ 0.99
PNKP-215ENST00000600910 SLC35F6Q8N357 371 aa21.24■□□□□ 0.99
PNKP-215ENST00000600910 SH3RF2Q8TEC5 729 aa21.24■□□□□ 0.99
PNKP-215ENST00000600910 SMARCD2Q92925 531 aa21.24■□□□□ 0.99
PNKP-215ENST00000600910 ZWILCHQ9H900 591 aa21.24■□□□□ 0.99
PNKP-215ENST00000600910 ARHGEF38Q9NXL2 777 aa21.24■□□□□ 0.99
PNKP-215ENST00000600910 CFAP97Q9P2B7 532 aa21.24■□□□□ 0.99
PNKP-215ENST00000600910 AMFRQ9UKV5 643 aa21.24■□□□□ 0.99
PNKP-215ENST00000600910 PACSIN2Q9UNF0 486 aaPredicted RBP21.24■□□□□ 0.99
PNKP-215ENST00000600910 COL6A3P12111 3177 aa21.24■□□□□ 0.99
PNKP-215ENST00000600910 DOCK8Q8NF50 2099 aa21.23■□□□□ 0.99
PNKP-215ENST00000600910 KCNU1A8MYU2 1149 aa21.23■□□□□ 0.99
PNKP-215ENST00000600910 I6L893 689 aaPredicted RBP21.23■□□□□ 0.99
PNKP-215ENST00000600910 LAMP2P13473 410 aa21.23■□□□□ 0.99
PNKP-215ENST00000600910 SP100P23497 879 aaPredicted RBP21.23■□□□□ 0.99
PNKP-215ENST00000600910 GJC1P36383 396 aa21.23■□□□□ 0.99
PNKP-215ENST00000600910 HARS2P49590 506 aaKnown RBP21.23■□□□□ 0.99
PNKP-215ENST00000600910 GNG11P61952 73 aa21.23■□□□□ 0.99
PNKP-215ENST00000600910 SMTNL2Q2TAL5 461 aa21.23■□□□□ 0.99
PNKP-215ENST00000600910 ARL13BQ3SXY8 428 aa21.23■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms