RNA–Protein interactions for RNA: ENST00000599223.5

IRF3-223, Transcript of interferon regulatory factor 3, humanhuman

TSL 1 (best) BASIC

Gene IRF3, Length 1,055 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-223ENST00000599223 SORCS1Q8WY21 1168 aa15.39■□□□□ 0.05
IRF3-223ENST00000599223 PIWIL1Q96J94 861 aaKnown RBP15.39■□□□□ 0.05
IRF3-223ENST00000599223 HEXIM2Q96MH2 286 aaKnown RBP15.39■□□□□ 0.05
IRF3-223ENST00000599223 MARCH2Q9P0N8 246 aa15.39■□□□□ 0.05
IRF3-223ENST00000599223 USP36Q9P275 1121 aaKnown RBP15.39■□□□□ 0.05
IRF3-223ENST00000599223 TP53BP1Q12888 1972 aaPredicted RBP15.38■□□□□ 0.05
IRF3-223ENST00000599223 TMEM131Q92545 1883 aa15.38■□□□□ 0.05
IRF3-223ENST00000599223 CELSR3Q9NYQ7 3312 aa15.38■□□□□ 0.05
IRF3-223ENST00000599223 A0A1W2PQ27 194 aa15.38■□□□□ 0.05
IRF3-223ENST00000599223 A0A1W2PQ64 194 aa15.38■□□□□ 0.05
IRF3-223ENST00000599223 A0A1W2PQD8 194 aa15.38■□□□□ 0.05
IRF3-223ENST00000599223 UPK3BL1B0FP48 263 aa15.38■□□□□ 0.05
IRF3-223ENST00000599223 KCNJ18B7U540 433 aa15.38■□□□□ 0.05
IRF3-223ENST00000599223 UPK3BL2E5RIL1 263 aa15.38■□□□□ 0.05
IRF3-223ENST00000599223 GFRA2O00451 464 aa15.38■□□□□ 0.05
IRF3-223ENST00000599223 ARHGAP33O14559 1287 aa15.38■□□□□ 0.05
IRF3-223ENST00000599223 GJB3O75712 270 aa15.38■□□□□ 0.05
IRF3-223ENST00000599223 TRIM21P19474 475 aaKnown RBP15.38■□□□□ 0.05
IRF3-223ENST00000599223 RPL13P26373 211 aaKnown RBP15.38■□□□□ 0.05
IRF3-223ENST00000599223 GTF2H1P32780 548 aa15.38■□□□□ 0.05
IRF3-223ENST00000599223 YWHAGP61981 247 aaKnown RBP eCLIP15.38■□□□□ 0.05
IRF3-223ENST00000599223 GOLGA7BQ2TAP0 167 aa15.38■□□□□ 0.05
IRF3-223ENST00000599223 EDRF1Q3B7T1 1238 aa15.38■□□□□ 0.05
IRF3-223ENST00000599223 ARHGAP17Q68EM7 881 aa15.38■□□□□ 0.05
IRF3-223ENST00000599223 SDE2Q6IQ49 451 aa15.38■□□□□ 0.05
IRF3-223ENST00000599223 TADA2BQ86TJ2 420 aa15.38■□□□□ 0.05
IRF3-223ENST00000599223 FAM217AQ8IXS0 508 aa15.38■□□□□ 0.05
IRF3-223ENST00000599223 FBXL13Q8NEE6 735 aa15.38■□□□□ 0.05
IRF3-223ENST00000599223 CEP76Q8TAP6 659 aa15.38■□□□□ 0.05
IRF3-223ENST00000599223 CCDC47Q96A33 483 aaKnown RBP15.38■□□□□ 0.05
IRF3-223ENST00000599223 TMEM176AQ96HP8 235 aa15.38■□□□□ 0.05
IRF3-223ENST00000599223 ZNF419Q96HQ0 510 aaPredicted RBP15.38■□□□□ 0.05
IRF3-223ENST00000599223 CAMK1GQ96NX5 476 aa15.38■□□□□ 0.05
IRF3-223ENST00000599223 ULBP1Q9BZM6 244 aa15.38■□□□□ 0.05
IRF3-223ENST00000599223 RAB20Q9NX57 234 aa15.38■□□□□ 0.05
IRF3-223ENST00000599223 THAP10Q9P2Z0 257 aaPredicted RBP15.38■□□□□ 0.05
IRF3-223ENST00000599223 DSPP15924 2871 aaKnown RBP15.38■□□□□ 0.05
IRF3-223ENST00000599223 LAMA5O15230 3695 aa15.37■□□□□ 0.05
IRF3-223ENST00000599223 SLC12A8A0AV02 714 aa15.37■□□□□ 0.05
IRF3-223ENST00000599223 ZNF202O95125 648 aa15.37■□□□□ 0.05
IRF3-223ENST00000599223 TKTL1P51854 596 aa15.37■□□□□ 0.05
IRF3-223ENST00000599223 ATXN3P54252 364 aaPredicted RBP15.37■□□□□ 0.05
IRF3-223ENST00000599223 PMS1P54277 932 aaKnown RBP15.37■□□□□ 0.05
IRF3-223ENST00000599223 PNOCQ13519 176 aa15.37■□□□□ 0.05
IRF3-223ENST00000599223 ZNF234Q14588 700 aa15.37■□□□□ 0.05
IRF3-223ENST00000599223 RSRC2Q7L4I2 434 aaKnown RBP15.37■□□□□ 0.05
IRF3-223ENST00000599223 ANKS1BQ7Z6G8 1248 aa15.37■□□□□ 0.05
IRF3-223ENST00000599223 CCDC150Q8NCX0 1101 aa15.37■□□□□ 0.05
IRF3-223ENST00000599223 TOE1Q96GM8 510 aaKnown RBP15.37■□□□□ 0.05
IRF3-223ENST00000599223 CDK5RAP1Q96SZ6 601 aaKnown RBP15.37■□□□□ 0.05
IRF3-223ENST00000599223 SLC32A1Q9H598 525 aa15.37■□□□□ 0.05
IRF3-223ENST00000599223 DNAAF2Q9NVR5 837 aaKnown RBP15.37■□□□□ 0.05
IRF3-223ENST00000599223 NYNRINQ9P2P1 1898 aaKnown RBP15.37■□□□□ 0.05
IRF3-223ENST00000599223 KNL1Q8NG31 2342 aa15.36■□□□□ 0.05
IRF3-223ENST00000599223 OPHN1O60890 802 aa15.36■□□□□ 0.05
IRF3-223ENST00000599223 EPB41P11171 864 aaKnown RBP15.36■□□□□ 0.05
IRF3-223ENST00000599223 HOXD9P28356 352 aaPredicted RBP15.36■□□□□ 0.05
IRF3-223ENST00000599223 CD6P30203 668 aa15.36■□□□□ 0.05
IRF3-223ENST00000599223 COPAP53621 1224 aa15.36■□□□□ 0.05
IRF3-223ENST00000599223 COG7P83436 770 aa15.36■□□□□ 0.05
IRF3-223ENST00000599223 PDE4CQ08493 712 aa15.36■□□□□ 0.05
IRF3-223ENST00000599223 ADIGQ0VDE8 80 aa15.36■□□□□ 0.05
IRF3-223ENST00000599223 GRIK2Q13002 908 aa15.36■□□□□ 0.05
IRF3-223ENST00000599223 STARD3Q14849 445 aa15.36■□□□□ 0.05
IRF3-223ENST00000599223 NFKBIBQ15653 356 aa15.36■□□□□ 0.05
IRF3-223ENST00000599223 PLEKHG6Q3KR16 790 aa15.36■□□□□ 0.05
IRF3-223ENST00000599223 DCAF17Q5H9S7 520 aaPredicted RBP15.36■□□□□ 0.05
IRF3-223ENST00000599223 RABEPKQ7Z6M1 372 aa15.36■□□□□ 0.05
IRF3-223ENST00000599223 ZC3H3Q8IXZ2 948 aaKnown RBP15.36■□□□□ 0.05
IRF3-223ENST00000599223 CPXM2Q8N436 756 aa15.36■□□□□ 0.05
IRF3-223ENST00000599223 HDDC3Q8N4P3 179 aa15.36■□□□□ 0.05
IRF3-223ENST00000599223 ZCCHC9Q8N567 271 aaKnown RBP15.36■□□□□ 0.05
IRF3-223ENST00000599223 UBR7Q8N806 425 aa15.36■□□□□ 0.05
IRF3-223ENST00000599223 ANKRD52Q8NB46 1076 aa15.36■□□□□ 0.05
IRF3-223ENST00000599223 PRDM16Q9HAZ2 1276 aa15.36■□□□□ 0.05
IRF3-223ENST00000599223 WSB2Q9NYS7 404 aaPredicted RBP15.36■□□□□ 0.05
IRF3-223ENST00000599223 TSPAN16Q9UKR8 245 aa15.36■□□□□ 0.05
IRF3-223ENST00000599223 ZNF510Q9Y2H8 683 aa15.36■□□□□ 0.05
IRF3-223ENST00000599223 NEUROG3Q9Y4Z2 214 aa15.36■□□□□ 0.05
IRF3-223ENST00000599223 ATP6V1DQ9Y5K8 247 aa15.36■□□□□ 0.05
IRF3-223ENST00000599223 SLCO1B1Q9Y6L6 691 aa15.36■□□□□ 0.05
IRF3-223ENST00000599223 CACNA1GO43497 2377 aa15.36■□□□□ 0.05
IRF3-223ENST00000599223 PLXNB3Q9ULL4 1909 aa15.35■□□□□ 0.05
IRF3-223ENST00000599223 ANKRD11Q6UB99 2663 aaPredicted RBP15.35■□□□□ 0.05
IRF3-223ENST00000599223 PTPRBP23467 1997 aa15.35■□□□□ 0.05
IRF3-223ENST00000599223 TRIM49BA6NDI0 452 aa15.35■□□□□ 0.05
IRF3-223ENST00000599223 ZBTB24O43167 697 aaPredicted RBP15.35■□□□□ 0.05
IRF3-223ENST00000599223 MSI1O43347 362 aaKnown RBP15.35■□□□□ 0.05
IRF3-223ENST00000599223 NDUFS2O75306 463 aa15.35■□□□□ 0.05
IRF3-223ENST00000599223 ZBED1O96006 694 aa15.35■□□□□ 0.05
IRF3-223ENST00000599223 HLA-EP13747 358 aa15.35■□□□□ 0.05
IRF3-223ENST00000599223 CHKAP35790 457 aa15.35■□□□□ 0.05
IRF3-223ENST00000599223 PRCPP42785 496 aa15.35■□□□□ 0.05
IRF3-223ENST00000599223 TPMTP51580 245 aa15.35■□□□□ 0.05
IRF3-223ENST00000599223 SGSHP51688 502 aa15.35■□□□□ 0.05
IRF3-223ENST00000599223 CUL2Q13617 745 aa15.35■□□□□ 0.05
IRF3-223ENST00000599223 TRIP4Q15650 581 aaPredicted RBP15.35■□□□□ 0.05
IRF3-223ENST00000599223 PM20D1Q6GTS8 502 aa15.35■□□□□ 0.05
IRF3-223ENST00000599223 FMNL3Q8IVF7 1028 aa15.35■□□□□ 0.05
IRF3-223ENST00000599223 RGL4Q8IZJ4 473 aa15.35■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 107.5 ms