RNA–Protein interactions for RNA: ENST00000599165.5

LIG1-217, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 570 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-217ENST00000599165 OLA1Q9NTK5 396 aaKnown RBP12.69□□□□□ -0.38
LIG1-217ENST00000599165 DNAJC12Q9UKB3 198 aa12.69□□□□□ -0.38
LIG1-217ENST00000599165 STRIP2Q9ULQ0 834 aa12.69□□□□□ -0.38
LIG1-217ENST00000599165 SLC27A6Q9Y2P4 619 aa12.69□□□□□ -0.38
LIG1-217ENST00000599165 HBS1LQ9Y450 684 aaKnown RBP12.69□□□□□ -0.38
LIG1-217ENST00000599165 KCNJ18B7U540 433 aa12.68□□□□□ -0.38
LIG1-217ENST00000599165 E5RJQ4 531 aa12.68□□□□□ -0.38
LIG1-217ENST00000599165 FOXN3O00409 490 aaPredicted RBP12.68□□□□□ -0.38
LIG1-217ENST00000599165 THAP12O43422 761 aa12.68□□□□□ -0.38
LIG1-217ENST00000599165 BCKDHBP21953 392 aa12.68□□□□□ -0.38
LIG1-217ENST00000599165 HOXD9P28356 352 aaPredicted RBP12.68□□□□□ -0.38
LIG1-217ENST00000599165 DGKGP49619 791 aa12.68□□□□□ -0.38
LIG1-217ENST00000599165 PITX1P78337 314 aaPredicted RBP12.68□□□□□ -0.38
LIG1-217ENST00000599165 PDCLQ13371 301 aa12.68□□□□□ -0.38
LIG1-217ENST00000599165 EIF4EBP2Q13542 120 aaPredicted RBP12.68□□□□□ -0.38
LIG1-217ENST00000599165 KCNJ12Q14500 433 aa12.68□□□□□ -0.38
LIG1-217ENST00000599165 TAF5Q15542 800 aa12.68□□□□□ -0.38
LIG1-217ENST00000599165 HSF5Q4G112 596 aaPredicted RBP12.68□□□□□ -0.38
LIG1-217ENST00000599165 FAM133BQ5BKY9 247 aaKnown RBP12.68□□□□□ -0.38
LIG1-217ENST00000599165 TCP11X2Q5H9J9 407 aa12.68□□□□□ -0.38
LIG1-217ENST00000599165 SYPL2Q5VXT5 272 aa12.68□□□□□ -0.38
LIG1-217ENST00000599165 TMEM215Q68D42 235 aa12.68□□□□□ -0.38
LIG1-217ENST00000599165 NADSYN1Q6IA69 706 aa12.68□□□□□ -0.38
LIG1-217ENST00000599165 KIAA1211LQ6NV74 962 aa12.68□□□□□ -0.38
LIG1-217ENST00000599165 FRMD1Q8N878 549 aa12.68□□□□□ -0.38
LIG1-217ENST00000599165 ZNF513Q8N8E2 541 aaPredicted RBP12.68□□□□□ -0.38
LIG1-217ENST00000599165 CCDC26Q8TAB7 109 aa12.68□□□□□ -0.38
LIG1-217ENST00000599165 ENOX1Q8TC92 643 aaKnown RBP12.68□□□□□ -0.38
LIG1-217ENST00000599165 DQX1Q8TE96 717 aaKnown RBP12.68□□□□□ -0.38
LIG1-217ENST00000599165 FCRL2Q96LA5 508 aaPredicted RBP12.68□□□□□ -0.38
LIG1-217ENST00000599165 XPO6Q96QU8 1125 aaKnown RBP12.68□□□□□ -0.38
LIG1-217ENST00000599165 DCLK3Q9C098 648 aa12.68□□□□□ -0.38
LIG1-217ENST00000599165 HSD3B7Q9H2F3 369 aa12.68□□□□□ -0.38
LIG1-217ENST00000599165 GMEB2Q9UKD1 530 aa12.68□□□□□ -0.38
LIG1-217ENST00000599165 NAALADL1Q9UQQ1 740 aa12.68□□□□□ -0.38
LIG1-217ENST00000599165 INVSQ9Y283 1065 aa12.68□□□□□ -0.38
LIG1-217ENST00000599165 ZNF510Q9Y2H8 683 aa12.68□□□□□ -0.38
LIG1-217ENST00000599165 NFE2L3Q9Y4A8 694 aa12.68□□□□□ -0.38
LIG1-217ENST00000599165 FHOD1Q9Y613 1164 aa12.68□□□□□ -0.38
LIG1-217ENST00000599165 PI4KAP42356 2102 aa12.67□□□□□ -0.38
LIG1-217ENST00000599165 GOLGA6L7A0A1B0GV03 622 aa12.67□□□□□ -0.38
LIG1-217ENST00000599165 FBXO21O94952 628 aa12.67□□□□□ -0.38
LIG1-217ENST00000599165 EPN2O95208 641 aa12.67□□□□□ -0.38
LIG1-217ENST00000599165 IGLV3-25P01717 112 aa12.67□□□□□ -0.38
LIG1-217ENST00000599165 SLC6A4P31645 630 aa12.67□□□□□ -0.38
LIG1-217ENST00000599165 CHKAP35790 457 aa12.67□□□□□ -0.38
LIG1-217ENST00000599165 WASP42768 502 aa12.67□□□□□ -0.38
LIG1-217ENST00000599165 DGKEP52429 567 aa12.67□□□□□ -0.38
LIG1-217ENST00000599165 TPD52L1Q16890 204 aaPredicted RBP12.67□□□□□ -0.38
LIG1-217ENST00000599165 CT47A1Q5JQC4 288 aaPredicted RBP12.67□□□□□ -0.38
LIG1-217ENST00000599165 EOGTQ5NDL2 527 aa12.67□□□□□ -0.38
LIG1-217ENST00000599165 CEP68Q76N32 757 aa12.67□□□□□ -0.38
LIG1-217ENST00000599165 CACNA2D4Q7Z3S7 1137 aa12.67□□□□□ -0.38
LIG1-217ENST00000599165 ARHGAP30Q7Z6I6 1101 aaPredicted RBP12.67□□□□□ -0.38
LIG1-217ENST00000599165 TAC4Q86UU9 113 aa12.67□□□□□ -0.38
LIG1-217ENST00000599165 SLC47A2Q86VL8 602 aa12.67□□□□□ -0.38
LIG1-217ENST00000599165 FAM114A1Q8IWE2 563 aa12.67□□□□□ -0.38
LIG1-217ENST00000599165 FAM71AQ8IYT1 594 aa12.67□□□□□ -0.38
LIG1-217ENST00000599165 KCNV2Q8TDN2 545 aa12.67□□□□□ -0.38
LIG1-217ENST00000599165 RNF139Q8WU17 664 aa12.67□□□□□ -0.38
LIG1-217ENST00000599165 SLC39A13Q96H72 371 aa12.67□□□□□ -0.38
LIG1-217ENST00000599165 GBP4Q96PP9 640 aa12.67□□□□□ -0.38
LIG1-217ENST00000599165 CPXM1Q96SM3 734 aa12.67□□□□□ -0.38
LIG1-217ENST00000599165 GABRG3Q99928 467 aa12.67□□□□□ -0.38
LIG1-217ENST00000599165 DLL3Q9NYJ7 618 aa12.67□□□□□ -0.38
LIG1-217ENST00000599165 TAB2Q9NYJ8 693 aa12.67□□□□□ -0.38
LIG1-217ENST00000599165 DACH1Q9UI36 760 aa12.67□□□□□ -0.38
LIG1-217ENST00000599165 PCDHGC3Q9UN70 934 aa12.67□□□□□ -0.38
LIG1-217ENST00000599165 DYNC1LI1Q9Y6G9 523 aaKnown RBP12.67□□□□□ -0.38
LIG1-217ENST00000599165 CNOT1A5YKK6 2376 aaKnown RBP12.67□□□□□ -0.38
LIG1-217ENST00000599165 NCOR2Q9Y618 2525 aa12.66□□□□□ -0.38
LIG1-217ENST00000599165 TCRBV21S2A2A0A5A6 115 aa12.66□□□□□ -0.38
LIG1-217ENST00000599165 WASH3PC4AMC7 463 aa12.66□□□□□ -0.38
LIG1-217ENST00000599165 TSPAN3O60637 253 aa12.66□□□□□ -0.38
LIG1-217ENST00000599165 LATS1O95835 1130 aa12.66□□□□□ -0.38
LIG1-217ENST00000599165 PRKCSHP14314 528 aaPredicted RBP12.66□□□□□ -0.38
LIG1-217ENST00000599165 GABRG2P18507 467 aa12.66□□□□□ -0.38
LIG1-217ENST00000599165 P2RY2P41231 377 aa12.66□□□□□ -0.38
LIG1-217ENST00000599165 ID4P47928 161 aa12.66□□□□□ -0.38
LIG1-217ENST00000599165 KLK7P49862 253 aa12.66□□□□□ -0.38
LIG1-217ENST00000599165 ENPP2Q13822 863 aa12.66□□□□□ -0.38
LIG1-217ENST00000599165 CCDC6Q16204 474 aa12.66□□□□□ -0.38
LIG1-217ENST00000599165 MAP7D1Q3KQU3 841 aa12.66□□□□□ -0.38
LIG1-217ENST00000599165 PLA2G2CQ5R387 149 aa12.66□□□□□ -0.38
LIG1-217ENST00000599165 KLHDC7AQ5VTJ3 777 aa12.66□□□□□ -0.38
LIG1-217ENST00000599165 BEND5Q7L4P6 421 aa12.66□□□□□ -0.38
LIG1-217ENST00000599165 PASD1Q8IV76 773 aa12.66□□□□□ -0.38
LIG1-217ENST00000599165 ADAM32Q8TC27 787 aa12.66□□□□□ -0.38
LIG1-217ENST00000599165 WFDC5Q8TCV5 224 aa12.66□□□□□ -0.38
LIG1-217ENST00000599165 RLN3Q8WXF3 142 aa12.66□□□□□ -0.38
LIG1-217ENST00000599165 DDX1Q92499 740 aaKnown RBP12.66□□□□□ -0.38
LIG1-217ENST00000599165 ERLEC1Q96DZ1 483 aa12.66□□□□□ -0.38
LIG1-217ENST00000599165 LMLNQ96KR4 655 aa12.66□□□□□ -0.38
LIG1-217ENST00000599165 FAM81BQ96LP2 452 aa12.66□□□□□ -0.38
LIG1-217ENST00000599165 PRICKLE1Q96MT3 831 aaPredicted RBP12.66□□□□□ -0.38
LIG1-217ENST00000599165 GANQ9H2C0 597 aa12.66□□□□□ -0.38
LIG1-217ENST00000599165 CD93Q9NPY3 652 aa12.66□□□□□ -0.38
LIG1-217ENST00000599165 ST7Q9NRC1 585 aa12.66□□□□□ -0.38
LIG1-217ENST00000599165 RXFP3Q9NSD7 469 aa12.66□□□□□ -0.38
LIG1-217ENST00000599165 SEMA4GQ9NTN9 838 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms